RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 CHTOPQ9Y3Y2 248 aaKnown RBP11.02□□□□□ -0.65
NDUFS3-213ENST00000534716 M0R378 163 aa11.01□□□□□ -0.65
NDUFS3-213ENST00000534716 NDUFA5Q16718 116 aa11.01□□□□□ -0.65
NDUFS3-213ENST00000534716 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
NDUFS3-213ENST00000534716 TMEM238C9JI98 176 aa11□□□□□ -0.65
NDUFS3-213ENST00000534716 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
NDUFS3-213ENST00000534716 CTAG1AP78358 180 aa10.99□□□□□ -0.65
NDUFS3-213ENST00000534716 PRLHP81277 87 aa10.99□□□□□ -0.65
NDUFS3-213ENST00000534716 KRTAP9-6A0A140TA67 174 aa10.98□□□□□ -0.65
NDUFS3-213ENST00000534716 FAM19A1Q7Z5A9 133 aa10.98□□□□□ -0.65
NDUFS3-213ENST00000534716 IFI27L1Q96BM0 104 aa10.97□□□□□ -0.65
NDUFS3-213ENST00000534716 LINC00158P58513 81 aa10.96□□□□□ -0.65
NDUFS3-213ENST00000534716 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.65
NDUFS3-213ENST00000534716 LINC00304Q8N9R0 145 aa10.95□□□□□ -0.66
NDUFS3-213ENST00000534716 IGKV2D-26A0A0A0MRZ7 120 aa10.94□□□□□ -0.66
NDUFS3-213ENST00000534716 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
NDUFS3-213ENST00000534716 HERV-K104P63124 156 aa10.91□□□□□ -0.66
NDUFS3-213ENST00000534716 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
NDUFS3-213ENST00000534716 LINC00587B1AMM8 73 aa10.89□□□□□ -0.67
NDUFS3-213ENST00000534716 SMIM13P0DJ93 91 aa10.89□□□□□ -0.67
NDUFS3-213ENST00000534716 PRYO14603 147 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 ATP6V1G1O75348 118 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 HSBP1O75506 76 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 BOD1L2Q8IYS8 172 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 FAM19A2Q8N3H0 131 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 MIR7-3HGQ8N6C7 128 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 SPRR4Q96PI1 79 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
NDUFS3-213ENST00000534716 MUC17Q685J3 4493 aa10.86□□□□□ -0.67
NDUFS3-213ENST00000534716 SPRR1AP35321 89 aa10.86□□□□□ -0.67
NDUFS3-213ENST00000534716 MEIG1Q5JSS6 88 aa10.86□□□□□ -0.67
NDUFS3-213ENST00000534716 C3orf22Q8N5N4 141 aa10.86□□□□□ -0.67
NDUFS3-213ENST00000534716 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
NDUFS3-213ENST00000534716 KCNQ1DNQ9H478 68 aa10.86□□□□□ -0.67
NDUFS3-213ENST00000534716 NDUFA12Q9UI09 145 aa10.86□□□□□ -0.67
NDUFS3-213ENST00000534716 RETNLBQ9BQ08 111 aa10.85□□□□□ -0.67
NDUFS3-213ENST00000534716 ZNF706Q9Y5V0 76 aaPredicted RBP10.85□□□□□ -0.67
NDUFS3-213ENST00000534716 A0A0U1RQV1 116 aa10.84□□□□□ -0.67
NDUFS3-213ENST00000534716 MYMXA0A1B0GTQ4 84 aa10.84□□□□□ -0.67
NDUFS3-213ENST00000534716 KRTAP4-16G5E9R7 235 aaPredicted RBP10.84□□□□□ -0.67
NDUFS3-213ENST00000534716 TPRXLQ17RH7 258 aa10.84□□□□□ -0.67
NDUFS3-213ENST00000534716 LOC107984156A0A0G2JMH3 177 aa10.83□□□□□ -0.68
NDUFS3-213ENST00000534716 SPAG11AQ6PDA7 123 aa10.83□□□□□ -0.68
NDUFS3-213ENST00000534716 ARL17AQ8IVW1 177 aa10.83□□□□□ -0.68
NDUFS3-213ENST00000534716 MAP1LC3CQ9BXW4 147 aa10.83□□□□□ -0.68
NDUFS3-213ENST00000534716 LEPROTL1O95214 131 aa10.82□□□□□ -0.68
NDUFS3-213ENST00000534716 TRGC2P03986 189 aa10.82□□□□□ -0.68
NDUFS3-213ENST00000534716 NCR3O14931 201 aa10.81□□□□□ -0.68
NDUFS3-213ENST00000534716 LINC00310P59036 64 aa10.81□□□□□ -0.68
NDUFS3-213ENST00000534716 LEPROTO15243 131 aa10.8□□□□□ -0.68
NDUFS3-213ENST00000534716 PLNP26678 52 aa10.8□□□□□ -0.68
NDUFS3-213ENST00000534716 TSPEAR-AS2P59090 65 aa10.8□□□□□ -0.68
NDUFS3-213ENST00000534716 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
NDUFS3-213ENST00000534716 TRBV10-3A0A0K0K1G6 114 aa10.79□□□□□ -0.68
NDUFS3-213ENST00000534716 H0Y8G0 127 aa10.79□□□□□ -0.68
NDUFS3-213ENST00000534716 SERF1AO75920 110 aa10.79□□□□□ -0.68
NDUFS3-213ENST00000534716 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
NDUFS3-213ENST00000534716 FAT4Q6V0I7 4981 aa10.77□□□□□ -0.68
NDUFS3-213ENST00000534716 TRBV10-2A0A0K0K1G8 114 aa10.77□□□□□ -0.69
NDUFS3-213ENST00000534716 ETDCA0A1B0GVM5 59 aa10.77□□□□□ -0.69
NDUFS3-213ENST00000534716 LINC00483Q53H64 154 aa10.77□□□□□ -0.69
NDUFS3-213ENST00000534716 HSPB8Q9UJY1 196 aa10.77□□□□□ -0.69
NDUFS3-213ENST00000534716 NMUP48645 174 aa10.76□□□□□ -0.69
NDUFS3-213ENST00000534716 S100A12P80511 92 aa10.76□□□□□ -0.69
NDUFS3-213ENST00000534716 CDIP1Q9H305 208 aa10.76□□□□□ -0.69
NDUFS3-213ENST00000534716 J3QQQ9 107 aa10.75□□□□□ -0.69
NDUFS3-213ENST00000534716 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
NDUFS3-213ENST00000534716 DPM2O94777 84 aa10.74□□□□□ -0.69
NDUFS3-213ENST00000534716 B5MCH6 92 aa10.73□□□□□ -0.69
NDUFS3-213ENST00000534716 HERVK_113P61574 105 aa10.73□□□□□ -0.69
NDUFS3-213ENST00000534716 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
NDUFS3-213ENST00000534716 FP248Q71RG6 208 aaPredicted RBP10.73□□□□□ -0.69
NDUFS3-213ENST00000534716 DAND5Q8N907 189 aa10.73□□□□□ -0.69
NDUFS3-213ENST00000534716 PPDPFQ9H3Y8 114 aa10.73□□□□□ -0.69
NDUFS3-213ENST00000534716 NDUFC2O95298 119 aa10.72□□□□□ -0.69
NDUFS3-213ENST00000534716 IGKCP01834 107 aa10.72□□□□□ -0.69
NDUFS3-213ENST00000534716 DDTP30046 118 aa10.72□□□□□ -0.69
NDUFS3-213ENST00000534716 Q8NBF4 154 aa10.72□□□□□ -0.69
NDUFS3-213ENST00000534716 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
NDUFS3-213ENST00000534716 FABP4P15090 132 aa10.71□□□□□ -0.69
NDUFS3-213ENST00000534716 COLCA2A8K830 154 aa10.7□□□□□ -0.7
NDUFS3-213ENST00000534716 SPINK1P00995 79 aa10.7□□□□□ -0.7
NDUFS3-213ENST00000534716 IGLV6-57P01721 117 aa10.7□□□□□ -0.7
NDUFS3-213ENST00000534716 LGALS3P17931 250 aaKnown RBP10.69□□□□□ -0.7
NDUFS3-213ENST00000534716 PMCHL2Q9BQD1 86 aa10.69□□□□□ -0.7
NDUFS3-213ENST00000534716 Q6ZRX8 168 aa10.68□□□□□ -0.7
NDUFS3-213ENST00000534716 Q9BRP9 147 aa10.68□□□□□ -0.7
NDUFS3-213ENST00000534716 MIEN1Q9BRT3 115 aa10.68□□□□□ -0.7
NDUFS3-213ENST00000534716 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
NDUFS3-213ENST00000534716 LCE2AQ5TA79 106 aaPredicted RBP10.67□□□□□ -0.7
NDUFS3-213ENST00000534716 GAGE2AQ6NT46 116 aa10.67□□□□□ -0.7
NDUFS3-213ENST00000534716 SSBP3-AS1Q7Z2R9 100 aa10.66□□□□□ -0.7
NDUFS3-213ENST00000534716 E9PLD3 99 aa10.65□□□□□ -0.7
NDUFS3-213ENST00000534716 RPS29P62273 56 aaKnown RBP10.65□□□□□ -0.7
NDUFS3-213ENST00000534716 A0A0J9YXY3 114 aa10.64□□□□□ -0.71
NDUFS3-213ENST00000534716 S100A7L2Q5SY68 101 aa10.64□□□□□ -0.71
NDUFS3-213ENST00000534716 ADAMTSL4-AS1Q5T5F5 129 aa10.64□□□□□ -0.71
NDUFS3-213ENST00000534716 SOSTDC1Q6X4U4 206 aa10.64□□□□□ -0.71
NDUFS3-213ENST00000534716 SLC7A5P1Q8MH63 180 aa10.64□□□□□ -0.71
NDUFS3-213ENST00000534716 KRTAP13-3Q3SY46 172 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms