RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GSKIPQ9P0R6 139 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 COPZ2Q9P299 210 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 SCP2D1Q9UJQ7 156 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 IGHV1-24A0A0C4DH33 117 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 TRBV6-1A0A0K0K1D8 114 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 CD3DP04234 171 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 RNASE3P12724 160 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 DDTP30046 118 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 RPS20P60866 119 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 SMCO1Q147U7 214 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 C10orf113Q5VZT2 155 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 TERB2Q8NHR7 220 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 LSM5Q9Y4Y9 91 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 V9GYH0 126 aa1.92□□□□□ -2.1
ECHDC1-223ENST00000534442 NAP1L6A6NFF2 107 aa1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 RPS29P62273 56 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 MRPS10P82664 201 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 C2orf91Q6ZV80 131 aa1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 OR5A1Q8NGJ0 315 aa1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 SMIM4Q8WVI0 70 aa1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 IMMP2LQ96T52 175 aa1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 SMIM3Q9BZL3 60 aa1.91□□□□□ -2.1
ECHDC1-223ENST00000534442 A0A1B0GV50 99 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 C9orf92A6NGG3 77 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 PLA2G10O15496 165 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 IAPPP10997 89 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 S100A4P26447 101 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 XCL1P47992 114 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 RRAS2P62070 204 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 SLC51BQ86UW2 128 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 C12orf45Q8N5I9 185 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 TMEM229BQ8NBD8 167 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 PRRT1Q99946 306 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 OR5AC2Q9NZP5 309 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 TMEM14CQ9P0S9 112 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 ANAPC10Q9UM13 185 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 HSPB11Q9Y547 144 aa1.9□□□□□ -2.11
ECHDC1-223ENST00000534442 KANTRA0A1W2PQU2 76 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 GRIFINA4D1Z8 144 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 F6UZH7 168 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 UBE2L6O14933 153 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 ARPC5O15511 151 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 SSSCA1O60232 199 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 CEBPGP53567 150 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 RAB4BP61018 213 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 RPL37P61927 97 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 SLC38A11Q08AI6 406 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 IAH1Q2TAA2 248 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 SFRP2Q96HF1 295 aa1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 CIB3Q96Q77 187 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 ZNF471Q9BX82 626 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-223ENST00000534442 C9orf170A2RU37 121 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 CCL25O15444 150 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 NDUFB6O95139 128 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 PYYP10082 97 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 RAB14P61106 215 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 LYZL1Q6UWQ5 148 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 KRTAP13-1Q8IUC0 172 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 MRPL35Q9NZE8 188 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 IL36BQ9NZH7 164 aa1.88□□□□□ -2.11
ECHDC1-223ENST00000534442 FNDC10F2Z333 226 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 H3BPC8 53 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 COX7A2LO14548 114 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 CST7O76096 145 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 SFT2D2O95562 160 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 SSBP1Q04837 148 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 ZNF56Q15929 161 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 SPANXN5Q5MJ07 72 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 PFDN5Q99471 154 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 SLC25A21Q9BQT8 299 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 NMES1Q9C002 83 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 PSENENQ9NZ42 101 aa1.87□□□□□ -2.11
ECHDC1-223ENST00000534442 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 BORCS7-ASMTA0A0B4J1R7 106 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 UBE2L5PA0A1B0GUS4 154 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 C11orf86A6NJI1 115 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 M0R036 132 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 NBEAP1P0C6P0 100 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 METTL15P1P0C7V9 234 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 TAS2R30P59541 319 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 RBM3P98179 157 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 TMEM128Q5BJH2 165 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 Q5BKY6 102 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 FAM74A1Q5RGS3 127 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 ALKAL2Q6UX46 152 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 LINC00299Q6ZSB3 139 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 STX12Q86Y82 276 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 FAM213BQ8TBF2 198 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 PPP1R1CQ8WVI7 109 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 LYRM2Q9NU23 88 aaPredicted RBP1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 C22orf24Q9Y442 160 aa1.86□□□□□ -2.11
ECHDC1-223ENST00000534442 LINC00959A0A1B0GUT2 108 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 H3BVH4 76 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 HMGB3O15347 200 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 MPC2O95563 127 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 TCRAP04437 139 aa1.85□□□□□ -2.11
ECHDC1-223ENST00000534442 MT1BP07438 61 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms