RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 H0Y8G0 127 aa5.66□□□□□ -1.5
SSBP3-215ENST00000533946 SERF1AO75920 110 aa5.66□□□□□ -1.5
SSBP3-215ENST00000533946 PMCHL2Q9BQD1 86 aa5.66□□□□□ -1.5
SSBP3-215ENST00000533946 IGLV1-50A0A075B6I6 118 aa5.65□□□□□ -1.5
SSBP3-215ENST00000533946 COLCA2A8K830 154 aa5.65□□□□□ -1.5
SSBP3-215ENST00000533946 M0R378 163 aa5.65□□□□□ -1.5
SSBP3-215ENST00000533946 SMIM13P0DJ93 91 aa5.65□□□□□ -1.5
SSBP3-215ENST00000533946 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
SSBP3-215ENST00000533946 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
SSBP3-215ENST00000533946 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
SSBP3-215ENST00000533946 NKAPP1Q8N9T2 125 aa5.64□□□□□ -1.51
SSBP3-215ENST00000533946 CHCHD1Q96BP2 118 aaKnown RBP5.64□□□□□ -1.51
SSBP3-215ENST00000533946 FABP4P15090 132 aa5.63□□□□□ -1.51
SSBP3-215ENST00000533946 LINC00158P58513 81 aa5.63□□□□□ -1.51
SSBP3-215ENST00000533946 DAND5Q8N907 189 aa5.63□□□□□ -1.51
SSBP3-215ENST00000533946 TMEM126AQ9H061 195 aa5.63□□□□□ -1.51
SSBP3-215ENST00000533946 TRAV12-1A0A0B4J245 112 aa5.62□□□□□ -1.51
SSBP3-215ENST00000533946 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
SSBP3-215ENST00000533946 RETNLBQ9BQ08 111 aa5.62□□□□□ -1.51
SSBP3-215ENST00000533946 NCR3O14931 201 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 HSBP1O75506 76 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 UBE2AP49459 152 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 PRR4Q16378 134 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 FAM19A1Q7Z5A9 133 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 C3orf22Q8N5N4 141 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 MIR7-3HGQ8N6C7 128 aa5.61□□□□□ -1.51
SSBP3-215ENST00000533946 COX17Q14061 63 aa5.59□□□□□ -1.51
SSBP3-215ENST00000533946 BOD1L2Q8IYS8 172 aa5.59□□□□□ -1.51
SSBP3-215ENST00000533946 TYMSOSQ8TAI1 123 aa5.59□□□□□ -1.51
SSBP3-215ENST00000533946 PLEKHB2Q96CS7 222 aa5.59□□□□□ -1.51
SSBP3-215ENST00000533946 NDUFA12Q9UI09 145 aa5.59□□□□□ -1.51
SSBP3-215ENST00000533946 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
SSBP3-215ENST00000533946 CRYGAP11844 174 aa5.58□□□□□ -1.52
SSBP3-215ENST00000533946 SOSTDC1Q6X4U4 206 aa5.58□□□□□ -1.52
SSBP3-215ENST00000533946 TRBV10-3A0A0K0K1G6 114 aa5.57□□□□□ -1.52
SSBP3-215ENST00000533946 KRTAP4-16G5E9R7 235 aaPredicted RBP5.57□□□□□ -1.52
SSBP3-215ENST00000533946 ERC2-IT1O76042 136 aa5.57□□□□□ -1.52
SSBP3-215ENST00000533946 ADAMTSL4-AS1Q5T5F5 129 aa5.57□□□□□ -1.52
SSBP3-215ENST00000533946 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
SSBP3-215ENST00000533946 LEPROTO15243 131 aa5.56□□□□□ -1.52
SSBP3-215ENST00000533946 RPL13AP40429 203 aaKnown RBP5.56□□□□□ -1.52
SSBP3-215ENST00000533946 NPC2P61916 151 aa5.56□□□□□ -1.52
SSBP3-215ENST00000533946 RPL24P83731 157 aaKnown RBP5.56□□□□□ -1.52
SSBP3-215ENST00000533946 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
SSBP3-215ENST00000533946 PPDPFQ9H3Y8 114 aa5.56□□□□□ -1.52
SSBP3-215ENST00000533946 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BKO60814 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BJP06899 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BOP23527 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BBP33778 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BDP58876 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BCP62807 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST2H2BEQ16778 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.55□□□□□ -1.52
SSBP3-215ENST00000533946 SMCR5Q8TEV8 140 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BHQ93079 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BNQ99877 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 HIST1H2BMQ99879 126 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 TTTY13Q9BZ97 58 aa5.55□□□□□ -1.52
SSBP3-215ENST00000533946 J3QQQ9 107 aa5.54□□□□□ -1.52
SSBP3-215ENST00000533946 DPM2O94777 84 aa5.54□□□□□ -1.52
SSBP3-215ENST00000533946 SPRR1AP35321 89 aa5.54□□□□□ -1.52
SSBP3-215ENST00000533946 SPRR4Q96PI1 79 aa5.54□□□□□ -1.52
SSBP3-215ENST00000533946 IGKV2D-26A0A0A0MRZ7 120 aa5.53□□□□□ -1.52
SSBP3-215ENST00000533946 Q9BRP9 147 aa5.53□□□□□ -1.52
SSBP3-215ENST00000533946 MYMXA0A1B0GTQ4 84 aa5.52□□□□□ -1.53
SSBP3-215ENST00000533946 IGKCP01834 107 aa5.52□□□□□ -1.53
SSBP3-215ENST00000533946 FAM229BQ4G0N7 80 aa5.52□□□□□ -1.53
SSBP3-215ENST00000533946 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
SSBP3-215ENST00000533946 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
SSBP3-215ENST00000533946 A0A0J9YXY3 114 aa5.51□□□□□ -1.53
SSBP3-215ENST00000533946 B5MCH6 92 aa5.51□□□□□ -1.53
SSBP3-215ENST00000533946 HERV-K104P63124 156 aa5.51□□□□□ -1.53
SSBP3-215ENST00000533946 LITAFQ99732 161 aa5.51□□□□□ -1.53
SSBP3-215ENST00000533946 HSPB8Q9UJY1 196 aa5.51□□□□□ -1.53
SSBP3-215ENST00000533946 LOC107984156A0A0G2JMH3 177 aa5.5□□□□□ -1.53
SSBP3-215ENST00000533946 SYS1-DBNDD2H3BUS1 97 aa5.5□□□□□ -1.53
SSBP3-215ENST00000533946 PRYO14603 147 aa5.5□□□□□ -1.53
SSBP3-215ENST00000533946 ATP6V1G1O75348 118 aa5.5□□□□□ -1.53
SSBP3-215ENST00000533946 PLNP26678 52 aa5.5□□□□□ -1.53
SSBP3-215ENST00000533946 ARL17AQ8IVW1 177 aa5.5□□□□□ -1.53
SSBP3-215ENST00000533946 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
SSBP3-215ENST00000533946 LINC00337Q8N6G1 96 aa5.49□□□□□ -1.53
SSBP3-215ENST00000533946 ST20-AS1Q8NBB2 130 aa5.49□□□□□ -1.53
SSBP3-215ENST00000533946 C3orf79P0CE67 100 aa5.48□□□□□ -1.53
SSBP3-215ENST00000533946 LGALS3P17931 250 aaKnown RBP5.48□□□□□ -1.53
SSBP3-215ENST00000533946 DDTP30046 118 aa5.48□□□□□ -1.53
SSBP3-215ENST00000533946 LINC01545Q5VT33 79 aa5.48□□□□□ -1.53
SSBP3-215ENST00000533946 GAGE2AQ6NT46 116 aa5.48□□□□□ -1.53
SSBP3-215ENST00000533946 Q8NBF4 154 aa5.48□□□□□ -1.53
SSBP3-215ENST00000533946 MAP1LC3CQ9BXW4 147 aa5.48□□□□□ -1.53
SSBP3-215ENST00000533946 ETDCA0A1B0GVM5 59 aa5.47□□□□□ -1.53
SSBP3-215ENST00000533946 E9PLD3 99 aa5.47□□□□□ -1.53
SSBP3-215ENST00000533946 IGLV6-57P01721 117 aa5.47□□□□□ -1.53
SSBP3-215ENST00000533946 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
SSBP3-215ENST00000533946 ATOH7Q8N100 152 aa5.46□□□□□ -1.54
SSBP3-215ENST00000533946 IGLV7-46A0A075B6I9 117 aa5.45□□□□□ -1.54
SSBP3-215ENST00000533946 IGLV9-49A0A0B4J1Y8 123 aa5.45□□□□□ -1.54
SSBP3-215ENST00000533946 HERVK_113P61574 105 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms