RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
CMTM1-218ENST00000533915 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
CMTM1-218ENST00000533915 PCP2Q8IVA1 136 aa8.88□□□□□ -0.99
CMTM1-218ENST00000533915 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
CMTM1-218ENST00000533915 M0QXV9 152 aa8.87□□□□□ -0.99
CMTM1-218ENST00000533915 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
CMTM1-218ENST00000533915 SPATA45Q537H7 98 aa8.87□□□□□ -0.99
CMTM1-218ENST00000533915 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
CMTM1-218ENST00000533915 TP73-AS1Q9UF72 201 aa8.87□□□□□ -0.99
CMTM1-218ENST00000533915 PAM16Q9Y3D7 125 aa8.87□□□□□ -0.99
CMTM1-218ENST00000533915 HSPG2P98160 4391 aa8.87□□□□□ -0.99
CMTM1-218ENST00000533915 PLA2G1BP04054 148 aaKnown RBP8.86□□□□□ -0.99
CMTM1-218ENST00000533915 S100A12P80511 92 aa8.86□□□□□ -0.99
CMTM1-218ENST00000533915 PYY3Q5JQD4 70 aa8.86□□□□□ -0.99
CMTM1-218ENST00000533915 Q6ZVH6 145 aa8.86□□□□□ -0.99
CMTM1-218ENST00000533915 BOD1L2Q8IYS8 172 aa8.86□□□□□ -0.99
CMTM1-218ENST00000533915 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
CMTM1-218ENST00000533915 SERTAD4-AS1Q5TG53 156 aa8.85□□□□□ -0.99
CMTM1-218ENST00000533915 Q8N1X5 172 aa8.85□□□□□ -0.99
CMTM1-218ENST00000533915 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
CMTM1-218ENST00000533915 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
CMTM1-218ENST00000533915 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
CMTM1-218ENST00000533915 COX8AP10176 69 aa8.84□□□□□ -0.99
CMTM1-218ENST00000533915 UBE2BP63146 152 aa8.84□□□□□ -0.99
CMTM1-218ENST00000533915 MRPL55Q7Z7F7 128 aaKnown RBP8.84□□□□□ -0.99
CMTM1-218ENST00000533915 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
CMTM1-218ENST00000533915 DAND5Q8N907 189 aa8.84□□□□□ -0.99
CMTM1-218ENST00000533915 DLEU1O43261 78 aa8.83□□□□□ -1
CMTM1-218ENST00000533915 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
CMTM1-218ENST00000533915 IFITM1P13164 125 aa8.82□□□□□ -1
CMTM1-218ENST00000533915 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
CMTM1-218ENST00000533915 ADAMTSL4-AS1Q5T5F5 129 aa8.82□□□□□ -1
CMTM1-218ENST00000533915 LITAFQ99732 161 aa8.82□□□□□ -1
CMTM1-218ENST00000533915 SPANXDQ9BXN6 97 aa8.82□□□□□ -1
CMTM1-218ENST00000533915 SPANXCQ9NY87 97 aa8.82□□□□□ -1
CMTM1-218ENST00000533915 VPREB1P12018 145 aa8.81□□□□□ -1
CMTM1-218ENST00000533915 SRSF9Q13242 221 aaKnown RBP eCLIP8.81□□□□□ -1
CMTM1-218ENST00000533915 Q5VSD8 79 aa8.81□□□□□ -1
CMTM1-218ENST00000533915 SLC25A34Q6PIV7 304 aa8.81□□□□□ -1
CMTM1-218ENST00000533915 LINC00308Q8TCZ7 52 aa8.81□□□□□ -1
CMTM1-218ENST00000533915 M0R378 163 aa8.8□□□□□ -1
CMTM1-218ENST00000533915 NDUFC2O95298 119 aa8.8□□□□□ -1
CMTM1-218ENST00000533915 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
CMTM1-218ENST00000533915 C14orf144Q96I85 54 aa8.8□□□□□ -1
CMTM1-218ENST00000533915 FAT1Q14517 4588 aa8.79□□□□□ -1
CMTM1-218ENST00000533915 HERC2O95714 4834 aa8.79□□□□□ -1
CMTM1-218ENST00000533915 SMIM6P0DI80 62 aa8.79□□□□□ -1
CMTM1-218ENST00000533915 NPC2P61916 151 aa8.79□□□□□ -1
CMTM1-218ENST00000533915 PPDPFQ9H3Y8 114 aa8.79□□□□□ -1
CMTM1-218ENST00000533915 SPANXB1Q9NS25 103 aaPredicted RBP8.79□□□□□ -1
CMTM1-218ENST00000533915 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
CMTM1-218ENST00000533915 A6NJY4 79 aa8.78□□□□□ -1
CMTM1-218ENST00000533915 LINC00167Q96N53 147 aa8.78□□□□□ -1
CMTM1-218ENST00000533915 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
CMTM1-218ENST00000533915 GAGE10A6NGK3 116 aa8.77□□□□□ -1.01
CMTM1-218ENST00000533915 LINC00518Q8N0U6 118 aa8.77□□□□□ -1.01
CMTM1-218ENST00000533915 CBY1Q9Y3M2 126 aa8.77□□□□□ -1.01
CMTM1-218ENST00000533915 VPS13BQ7Z7G8 4022 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 RPL37AP8A6NKH3 93 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 NCR3O14931 201 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 PRR3P79522 188 aaKnown RBP8.75□□□□□ -1.01
CMTM1-218ENST00000533915 S100A7L2Q5SY68 101 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 SOSTDC1Q6X4U4 206 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 HIGD1BQ9P298 99 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
CMTM1-218ENST00000533915 LOC105371267A0A1B0GV96 52 aa8.74□□□□□ -1.01
CMTM1-218ENST00000533915 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
CMTM1-218ENST00000533915 MUSTN1Q8IVN3 82 aa8.74□□□□□ -1.01
CMTM1-218ENST00000533915 Q8NDZ9 215 aa8.74□□□□□ -1.01
CMTM1-218ENST00000533915 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
CMTM1-218ENST00000533915 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
CMTM1-218ENST00000533915 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
CMTM1-218ENST00000533915 UQCR10Q9UDW1 63 aa8.73□□□□□ -1.01
CMTM1-218ENST00000533915 DDTP30046 118 aa8.72□□□□□ -1.01
CMTM1-218ENST00000533915 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
CMTM1-218ENST00000533915 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-218ENST00000533915 REG3GQ6UW15 175 aa8.71□□□□□ -1.02
CMTM1-218ENST00000533915 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
CMTM1-218ENST00000533915 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
CMTM1-218ENST00000533915 PRYO14603 147 aa8.7□□□□□ -1.02
CMTM1-218ENST00000533915 BCE1O60756 84 aa8.7□□□□□ -1.02
CMTM1-218ENST00000533915 TAL2Q16559 108 aa8.7□□□□□ -1.02
CMTM1-218ENST00000533915 TMEM126AQ9H061 195 aa8.7□□□□□ -1.02
CMTM1-218ENST00000533915 TRAV13-2A0A0B4J235 113 aa8.69□□□□□ -1.02
CMTM1-218ENST00000533915 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
CMTM1-218ENST00000533915 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
CMTM1-218ENST00000533915 IGLV6-57P01721 117 aa8.68□□□□□ -1.02
CMTM1-218ENST00000533915 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
CMTM1-218ENST00000533915 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
CMTM1-218ENST00000533915 C2orf91Q6ZV80 131 aa8.68□□□□□ -1.02
CMTM1-218ENST00000533915 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
CMTM1-218ENST00000533915 TMEM238LA0A1B0GVL6 79 aa8.67□□□□□ -1.02
CMTM1-218ENST00000533915 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
CMTM1-218ENST00000533915 UBE2AP49459 152 aa8.67□□□□□ -1.02
CMTM1-218ENST00000533915 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
CMTM1-218ENST00000533915 TRAV23DV6A0A075B6W5 121 aa8.66□□□□□ -1.02
CMTM1-218ENST00000533915 ETDCA0A1B0GVM5 59 aa8.66□□□□□ -1.02
CMTM1-218ENST00000533915 A4D1N5 150 aa8.66□□□□□ -1.02
CMTM1-218ENST00000533915 A6NDN8 102 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms