RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 HERVK_113P61574 105 aa5.49□□□□□ -1.53
PACS1-214ENST00000533811 SPATA45Q537H7 98 aa5.49□□□□□ -1.53
PACS1-214ENST00000533811 AMELXQ99217 191 aa5.49□□□□□ -1.53
PACS1-214ENST00000533811 CST9LQ9H4G1 147 aa5.49□□□□□ -1.53
PACS1-214ENST00000533811 C10orf25Q5T742 122 aa5.48□□□□□ -1.53
PACS1-214ENST00000533811 Q6ZUT4 128 aa5.48□□□□□ -1.53
PACS1-214ENST00000533811 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
PACS1-214ENST00000533811 MRPL35Q9NZE8 188 aaKnown RBP5.48□□□□□ -1.53
PACS1-214ENST00000533811 UQCR10Q9UDW1 63 aa5.48□□□□□ -1.53
PACS1-214ENST00000533811 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
PACS1-214ENST00000533811 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
PACS1-214ENST00000533811 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
PACS1-214ENST00000533811 IGLC3P0DOY3 106 aa5.47□□□□□ -1.53
PACS1-214ENST00000533811 UNQ6190/PRO20217Q6UXQ8 127 aa5.47□□□□□ -1.53
PACS1-214ENST00000533811 FAM19A3Q7Z5A8 133 aa5.47□□□□□ -1.53
PACS1-214ENST00000533811 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
PACS1-214ENST00000533811 C6orf48Q9UBA6 75 aa5.47□□□□□ -1.53
PACS1-214ENST00000533811 TINCRA0A1B0GVN0 87 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 DLEU1O43261 78 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 DDTP30046 118 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 HERVK_113P63121 156 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 ZC2HC1BQ5TFG8 222 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 KRTAP7-1Q8IUC3 87 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 MIEN1Q9BRT3 115 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 CDIP1Q9H305 208 aa5.46□□□□□ -1.54
PACS1-214ENST00000533811 H3BRM9 83 aa5.45□□□□□ -1.54
PACS1-214ENST00000533811 ZNF861PO60384 105 aa5.45□□□□□ -1.54
PACS1-214ENST00000533811 TLX1NBP0CAT3 122 aa5.45□□□□□ -1.54
PACS1-214ENST00000533811 COX8AP10176 69 aa5.45□□□□□ -1.54
PACS1-214ENST00000533811 SLC25A34Q6PIV7 304 aa5.45□□□□□ -1.54
PACS1-214ENST00000533811 ATOH7Q8N100 152 aa5.45□□□□□ -1.54
PACS1-214ENST00000533811 IGLV5-45A0A087WSX0 123 aa5.44□□□□□ -1.54
PACS1-214ENST00000533811 A0A087X002 238 aa5.44□□□□□ -1.54
PACS1-214ENST00000533811 E9PLD3 99 aa5.44□□□□□ -1.54
PACS1-214ENST00000533811 F8WDY8 70 aa5.44□□□□□ -1.54
PACS1-214ENST00000533811 LINC00242Q5T6M2 205 aa5.44□□□□□ -1.54
PACS1-214ENST00000533811 BOD1L2Q8IYS8 172 aa5.44□□□□□ -1.54
PACS1-214ENST00000533811 PLEKHB2Q96CS7 222 aa5.44□□□□□ -1.54
PACS1-214ENST00000533811 GEMIN7Q9H840 131 aaKnown RBP5.44□□□□□ -1.54
PACS1-214ENST00000533811 IGHV3OR16-9A0A0B4J2B5 98 aa5.42□□□□□ -1.54
PACS1-214ENST00000533811 CRYGAP11844 174 aa5.42□□□□□ -1.54
PACS1-214ENST00000533811 NMUP48645 174 aa5.42□□□□□ -1.54
PACS1-214ENST00000533811 LBHQ53QV2 105 aaPredicted RBP5.42□□□□□ -1.54
PACS1-214ENST00000533811 C9orf129Q5T035 196 aaKnown RBP5.42□□□□□ -1.54
PACS1-214ENST00000533811 TMEM170BQ5T4T1 132 aa5.42□□□□□ -1.54
PACS1-214ENST00000533811 SFTA2Q6UW10 78 aa5.42□□□□□ -1.54
PACS1-214ENST00000533811 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
PACS1-214ENST00000533811 HIGD1BQ9P298 99 aa5.42□□□□□ -1.54
PACS1-214ENST00000533811 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
PACS1-214ENST00000533811 PCP4L1A6NKN8 68 aa5.41□□□□□ -1.54
PACS1-214ENST00000533811 ZNF22P17026 224 aaPredicted RBP5.41□□□□□ -1.54
PACS1-214ENST00000533811 ANKRD39Q53RE8 183 aa5.41□□□□□ -1.54
PACS1-214ENST00000533811 C2orf82Q6UX34 121 aa5.41□□□□□ -1.54
PACS1-214ENST00000533811 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
PACS1-214ENST00000533811 PRO1933Q9H354 126 aa5.41□□□□□ -1.54
PACS1-214ENST00000533811 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
PACS1-214ENST00000533811 IGLV7-46A0A075B6I9 117 aa5.4□□□□□ -1.54
PACS1-214ENST00000533811 TRBV30A0A0K0K1B3 111 aa5.4□□□□□ -1.54
PACS1-214ENST00000533811 NDUFC2-KCTD14E9PQ53 114 aa5.4□□□□□ -1.54
PACS1-214ENST00000533811 M0R143 59 aa5.4□□□□□ -1.54
PACS1-214ENST00000533811 LEPROTO15243 131 aa5.4□□□□□ -1.54
PACS1-214ENST00000533811 RPL28P46779 137 aaKnown RBP5.4□□□□□ -1.54
PACS1-214ENST00000533811 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.54
PACS1-214ENST00000533811 LGALS3P17931 250 aaKnown RBP5.39□□□□□ -1.55
PACS1-214ENST00000533811 KIAA0087Q14695 138 aa5.39□□□□□ -1.55
PACS1-214ENST00000533811 TAL2Q16559 108 aa5.39□□□□□ -1.55
PACS1-214ENST00000533811 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
PACS1-214ENST00000533811 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
PACS1-214ENST00000533811 C14orf144Q96I85 54 aa5.39□□□□□ -1.55
PACS1-214ENST00000533811 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
PACS1-214ENST00000533811 C22orf24Q9Y442 160 aa5.39□□□□□ -1.55
PACS1-214ENST00000533811 IGLV5-39A0A0G2JS06 123 aa5.38□□□□□ -1.55
PACS1-214ENST00000533811 MYMXA0A1B0GTQ4 84 aa5.38□□□□□ -1.55
PACS1-214ENST00000533811 J3QQQ9 107 aa5.38□□□□□ -1.55
PACS1-214ENST00000533811 XAGE1AQ9HD64 81 aa5.38□□□□□ -1.55
PACS1-214ENST00000533811 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 BCE1O60756 84 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 PRSS2P07478 247 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 LINC01547P58512 204 aaPredicted RBP5.37□□□□□ -1.55
PACS1-214ENST00000533811 HERV-K104P63124 156 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 HSD52Q0P140 79 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 TOMM7Q9P0U1 55 aa5.37□□□□□ -1.55
PACS1-214ENST00000533811 IGKV2D-26A0A0A0MRZ7 120 aa5.36□□□□□ -1.55
PACS1-214ENST00000533811 LINC00587B1AMM8 73 aa5.36□□□□□ -1.55
PACS1-214ENST00000533811 CXCL5P42830 114 aa5.36□□□□□ -1.55
PACS1-214ENST00000533811 Q6ZVH6 145 aa5.36□□□□□ -1.55
PACS1-214ENST00000533811 PCP2Q8IVA1 136 aa5.36□□□□□ -1.55
PACS1-214ENST00000533811 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
PACS1-214ENST00000533811 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
PACS1-214ENST00000533811 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
PACS1-214ENST00000533811 TMEM238C9JI98 176 aa5.35□□□□□ -1.55
PACS1-214ENST00000533811 TIMM17BO60830 172 aa5.35□□□□□ -1.55
PACS1-214ENST00000533811 SPINK8P0C7L1 97 aa5.35□□□□□ -1.55
PACS1-214ENST00000533811 CKS1BP61024 79 aa5.35□□□□□ -1.55
PACS1-214ENST00000533811 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
PACS1-214ENST00000533811 MRPL55Q7Z7F7 128 aaKnown RBP5.35□□□□□ -1.55
PACS1-214ENST00000533811 PPDPFQ9H3Y8 114 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms