RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ANAPC11Q9NYG5 84 aa9.12□□□□□ -0.95
CPSF1-211ENST00000533492 A0A0U1RRA0 63 aa9.11□□□□□ -0.95
CPSF1-211ENST00000533492 TMEM238C9JI98 176 aa9.11□□□□□ -0.95
CPSF1-211ENST00000533492 ATP6V1G1O75348 118 aa9.11□□□□□ -0.95
CPSF1-211ENST00000533492 HSBP1O75506 76 aa9.11□□□□□ -0.95
CPSF1-211ENST00000533492 PRLHP81277 87 aa9.11□□□□□ -0.95
CPSF1-211ENST00000533492 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
CPSF1-211ENST00000533492 LPAP08519 4548 aa9.1□□□□□ -0.95
CPSF1-211ENST00000533492 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
CPSF1-211ENST00000533492 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
CPSF1-211ENST00000533492 M0R378 163 aa9.08□□□□□ -0.96
CPSF1-211ENST00000533492 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
CPSF1-211ENST00000533492 CBLN2Q8IUK8 224 aa9.08□□□□□ -0.96
CPSF1-211ENST00000533492 Q8NDZ9 215 aa9.08□□□□□ -0.96
CPSF1-211ENST00000533492 IGKV2D-26A0A0A0MRZ7 120 aa9.07□□□□□ -0.96
CPSF1-211ENST00000533492 H0Y8G0 127 aa9.06□□□□□ -0.96
CPSF1-211ENST00000533492 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
CPSF1-211ENST00000533492 KRTAP13-2Q52LG2 175 aa9.06□□□□□ -0.96
CPSF1-211ENST00000533492 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
CPSF1-211ENST00000533492 TRGC2P03986 189 aa9.05□□□□□ -0.96
CPSF1-211ENST00000533492 HERV-K104P63124 156 aa9.05□□□□□ -0.96
CPSF1-211ENST00000533492 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
CPSF1-211ENST00000533492 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
CPSF1-211ENST00000533492 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
CPSF1-211ENST00000533492 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
CPSF1-211ENST00000533492 MYMXA0A1B0GTQ4 84 aa9.03□□□□□ -0.96
CPSF1-211ENST00000533492 MIR7-3HGQ8N6C7 128 aa9.03□□□□□ -0.96
CPSF1-211ENST00000533492 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
CPSF1-211ENST00000533492 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
CPSF1-211ENST00000533492 MAP1LC3CQ9BXW4 147 aa9.03□□□□□ -0.96
CPSF1-211ENST00000533492 SERF1AO75920 110 aa9.01□□□□□ -0.97
CPSF1-211ENST00000533492 NCR3O14931 201 aa9□□□□□ -0.97
CPSF1-211ENST00000533492 HSPB8Q9UJY1 196 aa9□□□□□ -0.97
CPSF1-211ENST00000533492 PRYO14603 147 aa8.99□□□□□ -0.97
CPSF1-211ENST00000533492 LEPROTO15243 131 aa8.99□□□□□ -0.97
CPSF1-211ENST00000533492 FABP4P15090 132 aa8.99□□□□□ -0.97
CPSF1-211ENST00000533492 PLNP26678 52 aa8.99□□□□□ -0.97
CPSF1-211ENST00000533492 HERVK_113P61574 105 aa8.98□□□□□ -0.97
CPSF1-211ENST00000533492 S100A12P80511 92 aa8.98□□□□□ -0.97
CPSF1-211ENST00000533492 LINC00310P59036 64 aa8.97□□□□□ -0.97
CPSF1-211ENST00000533492 SLC7A5P1Q8MH63 180 aa8.97□□□□□ -0.97
CPSF1-211ENST00000533492 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
CPSF1-211ENST00000533492 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
CPSF1-211ENST00000533492 ETDCA0A1B0GVM5 59 aa8.96□□□□□ -0.98
CPSF1-211ENST00000533492 DPM2O94777 84 aa8.96□□□□□ -0.98
CPSF1-211ENST00000533492 C3orf22Q8N5N4 141 aa8.96□□□□□ -0.98
CPSF1-211ENST00000533492 LINC00337Q8N6G1 96 aa8.96□□□□□ -0.98
CPSF1-211ENST00000533492 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
CPSF1-211ENST00000533492 KCNQ1DNQ9H478 68 aa8.96□□□□□ -0.98
CPSF1-211ENST00000533492 TRBV10-3A0A0K0K1G6 114 aa8.95□□□□□ -0.98
CPSF1-211ENST00000533492 J3QQQ9 107 aa8.95□□□□□ -0.98
CPSF1-211ENST00000533492 TSPEAR-AS2P59090 65 aa8.95□□□□□ -0.98
CPSF1-211ENST00000533492 CTAG1AP78358 180 aa8.95□□□□□ -0.98
CPSF1-211ENST00000533492 IGKCP01834 107 aa8.94□□□□□ -0.98
CPSF1-211ENST00000533492 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
CPSF1-211ENST00000533492 SPRR1AP35321 89 aa8.94□□□□□ -0.98
CPSF1-211ENST00000533492 DAND5Q8N907 189 aa8.94□□□□□ -0.98
CPSF1-211ENST00000533492 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
CPSF1-211ENST00000533492 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
CPSF1-211ENST00000533492 COLCA2A8K830 154 aa8.93□□□□□ -0.98
CPSF1-211ENST00000533492 NMUP48645 174 aa8.93□□□□□ -0.98
CPSF1-211ENST00000533492 MIEN1Q9BRT3 115 aa8.93□□□□□ -0.98
CPSF1-211ENST00000533492 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
CPSF1-211ENST00000533492 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
CPSF1-211ENST00000533492 LOC107984156A0A0G2JMH3 177 aa8.91□□□□□ -0.98
CPSF1-211ENST00000533492 DDTP30046 118 aa8.91□□□□□ -0.98
CPSF1-211ENST00000533492 ARL17AQ8IVW1 177 aa8.91□□□□□ -0.98
CPSF1-211ENST00000533492 PPDPFQ9H3Y8 114 aa8.91□□□□□ -0.98
CPSF1-211ENST00000533492 IGLV7-46A0A075B6I9 117 aa8.9□□□□□ -0.98
CPSF1-211ENST00000533492 TRBV10-2A0A0K0K1G8 114 aa8.9□□□□□ -0.98
CPSF1-211ENST00000533492 KRTAP4-16G5E9R7 235 aaPredicted RBP8.9□□□□□ -0.98
CPSF1-211ENST00000533492 CDIP1Q9H305 208 aa8.89□□□□□ -0.99
CPSF1-211ENST00000533492 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
CPSF1-211ENST00000533492 SPANXB1Q9NS25 103 aaPredicted RBP8.88□□□□□ -0.99
CPSF1-211ENST00000533492 B5MCH6 92 aa8.87□□□□□ -0.99
CPSF1-211ENST00000533492 GAGE2AQ6NT46 116 aa8.87□□□□□ -0.99
CPSF1-211ENST00000533492 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
CPSF1-211ENST00000533492 NDUFC2O95298 119 aa8.86□□□□□ -0.99
CPSF1-211ENST00000533492 TPRXLQ17RH7 258 aa8.86□□□□□ -0.99
CPSF1-211ENST00000533492 Q8NBF4 154 aa8.86□□□□□ -0.99
CPSF1-211ENST00000533492 E9PLD3 99 aa8.85□□□□□ -0.99
CPSF1-211ENST00000533492 NPC2P61916 151 aa8.85□□□□□ -0.99
CPSF1-211ENST00000533492 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
CPSF1-211ENST00000533492 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
CPSF1-211ENST00000533492 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
CPSF1-211ENST00000533492 ERC2-IT1O76042 136 aa8.83□□□□□ -1
CPSF1-211ENST00000533492 IGLV6-57P01721 117 aa8.83□□□□□ -1
CPSF1-211ENST00000533492 ADAMTSL4-AS1Q5T5F5 129 aa8.83□□□□□ -1
CPSF1-211ENST00000533492 Q6ZRX8 168 aa8.83□□□□□ -1
CPSF1-211ENST00000533492 MUC2Q02817 5179 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 TRAV23DV6A0A075B6W5 121 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 IGLV9-49A0A0B4J1Y8 123 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 HIST1H2BKO60814 126 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 HIST1H2BJP06899 126 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 HIST1H2BOP23527 126 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 HIST1H2BBP33778 126 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 HIST1H2BDP58876 126 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 HIST1H2BCP62807 126 aa8.82□□□□□ -1
CPSF1-211ENST00000533492 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
CPSF1-211ENST00000533492 HIST2H2BEQ16778 126 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms