RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 XGP55808 180 aa13.35□□□□□ -0.27
PTP4A2-215ENST00000533408 ADAMTSL4-AS1Q5T5F5 129 aa13.35□□□□□ -0.27
PTP4A2-215ENST00000533408 C7orf33Q8WU49 177 aa13.35□□□□□ -0.27
PTP4A2-215ENST00000533408 LITAFQ99732 161 aa13.35□□□□□ -0.27
PTP4A2-215ENST00000533408 PPDPFQ9H3Y8 114 aa13.35□□□□□ -0.27
PTP4A2-215ENST00000533408 TP73-AS1Q9UF72 201 aa13.35□□□□□ -0.27
PTP4A2-215ENST00000533408 A0A1W2PNN7 141 aa13.34□□□□□ -0.27
PTP4A2-215ENST00000533408 FAM19A5Q7Z5A7 132 aaPredicted RBP13.34□□□□□ -0.27
PTP4A2-215ENST00000533408 DAND5Q8N907 189 aa13.34□□□□□ -0.27
PTP4A2-215ENST00000533408 SPANXB1Q9NS25 103 aaPredicted RBP13.34□□□□□ -0.27
PTP4A2-215ENST00000533408 IGLV5-37A0A075B6J1 123 aa13.33□□□□□ -0.28
PTP4A2-215ENST00000533408 HIGD1BQ9P298 99 aa13.33□□□□□ -0.28
PTP4A2-215ENST00000533408 HECTD4Q9Y4D8 3996 aa13.32□□□□□ -0.28
PTP4A2-215ENST00000533408 LINC00308Q8TCZ7 52 aa13.32□□□□□ -0.28
PTP4A2-215ENST00000533408 DNAH11Q96DT5 4516 aa13.32□□□□□ -0.28
PTP4A2-215ENST00000533408 FAM168BA1KXE4 195 aa13.31□□□□□ -0.28
PTP4A2-215ENST00000533408 M0QXV9 152 aa13.31□□□□□ -0.28
PTP4A2-215ENST00000533408 NDUFC2O95298 119 aa13.31□□□□□ -0.28
PTP4A2-215ENST00000533408 UQCR10Q9UDW1 63 aa13.31□□□□□ -0.28
PTP4A2-215ENST00000533408 C22orf24Q9Y442 160 aa13.31□□□□□ -0.28
PTP4A2-215ENST00000533408 SERTAD4-AS1Q5TG53 156 aa13.29□□□□□ -0.28
PTP4A2-215ENST00000533408 MRPL55Q7Z7F7 128 aaKnown RBP13.29□□□□□ -0.28
PTP4A2-215ENST00000533408 VPREB1P12018 145 aa13.28□□□□□ -0.28
PTP4A2-215ENST00000533408 LINC00518Q8N0U6 118 aa13.28□□□□□ -0.28
PTP4A2-215ENST00000533408 HIST1H4GQ99525 98 aa13.28□□□□□ -0.28
PTP4A2-215ENST00000533408 TRBV10-2A0A0K0K1G8 114 aa13.27□□□□□ -0.29
PTP4A2-215ENST00000533408 M0R378 163 aa13.27□□□□□ -0.29
PTP4A2-215ENST00000533408 C12orf57Q99622 126 aa13.27□□□□□ -0.29
PTP4A2-215ENST00000533408 FAM229AH3BQW9 127 aa13.26□□□□□ -0.29
PTP4A2-215ENST00000533408 NPC2P61916 151 aa13.26□□□□□ -0.29
PTP4A2-215ENST00000533408 UBE2BP63146 152 aa13.26□□□□□ -0.29
PTP4A2-215ENST00000533408 HAMPP81172 84 aa13.25□□□□□ -0.29
PTP4A2-215ENST00000533408 TAL2Q16559 108 aa13.25□□□□□ -0.29
PTP4A2-215ENST00000533408 CBY1Q9Y3M2 126 aa13.25□□□□□ -0.29
PTP4A2-215ENST00000533408 MUSTN1Q8IVN3 82 aa13.24□□□□□ -0.29
PTP4A2-215ENST00000533408 SOSTDC1Q6X4U4 206 aa13.23□□□□□ -0.29
PTP4A2-215ENST00000533408 PHF5AQ7RTV0 110 aaKnown RBP13.23□□□□□ -0.29
PTP4A2-215ENST00000533408 KRTAP7-1Q8IUC3 87 aa13.23□□□□□ -0.29
PTP4A2-215ENST00000533408 TSTD3H0UI37 97 aa13.22□□□□□ -0.29
PTP4A2-215ENST00000533408 LINC00528Q8N1L1 170 aa13.21□□□□□ -0.29
PTP4A2-215ENST00000533408 LINC00167Q96N53 147 aa13.21□□□□□ -0.29
PTP4A2-215ENST00000533408 PKHD1P08F94 4074 aa13.21□□□□□ -0.29
PTP4A2-215ENST00000533408 PLA2G1BP04054 148 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-215ENST00000533408 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
PTP4A2-215ENST00000533408 C2orf91Q6ZV80 131 aa13.2□□□□□ -0.3
PTP4A2-215ENST00000533408 SMR3BP02814 79 aaPredicted RBP13.19□□□□□ -0.3
PTP4A2-215ENST00000533408 NCR3O14931 201 aa13.18□□□□□ -0.3
PTP4A2-215ENST00000533408 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
PTP4A2-215ENST00000533408 TMEM238LA0A1B0GVL6 79 aa13.17□□□□□ -0.3
PTP4A2-215ENST00000533408 GAGE10A6NGK3 116 aa13.17□□□□□ -0.3
PTP4A2-215ENST00000533408 A6NJY4 79 aa13.17□□□□□ -0.3
PTP4A2-215ENST00000533408 PRR3P79522 188 aaKnown RBP13.17□□□□□ -0.3
PTP4A2-215ENST00000533408 PRO1933Q9H354 126 aa13.17□□□□□ -0.3
PTP4A2-215ENST00000533408 IGLV1-50A0A075B6I6 118 aa13.16□□□□□ -0.3
PTP4A2-215ENST00000533408 EIF4EBP3O60516 100 aaPredicted RBP13.16□□□□□ -0.3
PTP4A2-215ENST00000533408 RPL37AP61513 92 aaKnown RBP13.16□□□□□ -0.3
PTP4A2-215ENST00000533408 Q8NDZ9 215 aa13.16□□□□□ -0.3
PTP4A2-215ENST00000533408 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
PTP4A2-215ENST00000533408 TRAV13-2A0A0B4J235 113 aa13.15□□□□□ -0.3
PTP4A2-215ENST00000533408 DDTP30046 118 aa13.15□□□□□ -0.3
PTP4A2-215ENST00000533408 HSD52Q0P140 79 aa13.15□□□□□ -0.3
PTP4A2-215ENST00000533408 Q8N1X5 172 aa13.15□□□□□ -0.3
PTP4A2-215ENST00000533408 OR13C6PQ8NH95 151 aa13.15□□□□□ -0.3
PTP4A2-215ENST00000533408 DNAH5Q8TE73 4624 aa13.15□□□□□ -0.3
PTP4A2-215ENST00000533408 RPL37AP8A6NKH3 93 aa13.14□□□□□ -0.31
PTP4A2-215ENST00000533408 CEND1Q8N111 149 aa13.14□□□□□ -0.31
PTP4A2-215ENST00000533408 A4D1N5 150 aa13.13□□□□□ -0.31
PTP4A2-215ENST00000533408 IGKV2-28A0A075B6P5 120 aa13.12□□□□□ -0.31
PTP4A2-215ENST00000533408 IGKV2D-28P01615 120 aa13.12□□□□□ -0.31
PTP4A2-215ENST00000533408 EPPK1P58107 5090 aaKnown RBP13.12□□□□□ -0.31
PTP4A2-215ENST00000533408 DYNC1H1Q14204 4646 aaKnown RBP13.11□□□□□ -0.31
PTP4A2-215ENST00000533408 TRBV10-3A0A0K0K1G6 114 aa13.11□□□□□ -0.31
PTP4A2-215ENST00000533408 PRYO14603 147 aa13.11□□□□□ -0.31
PTP4A2-215ENST00000533408 KCNQ1DNQ9H478 68 aa13.11□□□□□ -0.31
PTP4A2-215ENST00000533408 PSORS1C2Q9UIG4 136 aa13.11□□□□□ -0.31
PTP4A2-215ENST00000533408 LRP1BQ9NZR2 4599 aa13.1□□□□□ -0.31
PTP4A2-215ENST00000533408 A6NDN8 102 aa13.1□□□□□ -0.31
PTP4A2-215ENST00000533408 IGLV6-57P01721 117 aa13.1□□□□□ -0.31
PTP4A2-215ENST00000533408 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
PTP4A2-215ENST00000533408 C1orf137Q5JT78 98 aa13.09□□□□□ -0.31
PTP4A2-215ENST00000533408 Q5VSD8 79 aa13.09□□□□□ -0.31
PTP4A2-215ENST00000533408 HINT1P49773 126 aaPredicted RBP13.08□□□□□ -0.32
PTP4A2-215ENST00000533408 BCE1O60756 84 aa13.07□□□□□ -0.32
PTP4A2-215ENST00000533408 M0R143 59 aa13.06□□□□□ -0.32
PTP4A2-215ENST00000533408 LINC00337Q8N6G1 96 aa13.06□□□□□ -0.32
PTP4A2-215ENST00000533408 RAB37Q96AX2 223 aa13.06□□□□□ -0.32
PTP4A2-215ENST00000533408 TRAV23DV6A0A075B6W5 121 aa13.05□□□□□ -0.32
PTP4A2-215ENST00000533408 A0A0B4J2C4 111 aa13.03□□□□□ -0.32
PTP4A2-215ENST00000533408 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
PTP4A2-215ENST00000533408 ETDCA0A1B0GVM5 59 aa13.02□□□□□ -0.33
PTP4A2-215ENST00000533408 IGLV7-43P04211 117 aa13.02□□□□□ -0.33
PTP4A2-215ENST00000533408 KRTAP11-1Q8IUC1 163 aa13.02□□□□□ -0.33
PTP4A2-215ENST00000533408 ZNF73O43830 326 aaPredicted RBP13.01□□□□□ -0.33
PTP4A2-215ENST00000533408 UBE2AP49459 152 aa13.01□□□□□ -0.33
PTP4A2-215ENST00000533408 CTAG1AP78358 180 aa13.01□□□□□ -0.33
PTP4A2-215ENST00000533408 DNAH8Q96JB1 4490 aa13.01□□□□□ -0.33
PTP4A2-215ENST00000533408 CFC1BP0CG36 223 aa13□□□□□ -0.33
PTP4A2-215ENST00000533408 CFC1P0CG37 223 aa13□□□□□ -0.33
PTP4A2-215ENST00000533408 SPRR1AP35321 89 aa13□□□□□ -0.33
PTP4A2-215ENST00000533408 FAM19A1Q7Z5A9 133 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms