RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 Q6ZRX8 168 aa12.16□□□□□ -0.46
PAX6-228ENST00000533333 ST20-AS1Q8NBB2 130 aa12.16□□□□□ -0.46
PAX6-228ENST00000533333 LTBP2Q14767 1821 aa12.15□□□□□ -0.46
PAX6-228ENST00000533333 RAI1Q7Z5J4 1906 aaPredicted RBP12.14□□□□□ -0.47
PAX6-228ENST00000533333 IGLV5-39A0A0G2JS06 123 aa12.14□□□□□ -0.47
PAX6-228ENST00000533333 A0A1B0GW54 56 aa12.14□□□□□ -0.47
PAX6-228ENST00000533333 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
PAX6-228ENST00000533333 A0A096LNJ9 63 aa12.14□□□□□ -0.47
PAX6-228ENST00000533333 C4orf26Q17RF5 130 aa12.14□□□□□ -0.47
PAX6-228ENST00000533333 LOC101927531A0A1B0GV80 90 aa12.14□□□□□ -0.47
PAX6-228ENST00000533333 PCDH15Q96QU1 1955 aa12.13□□□□□ -0.47
PAX6-228ENST00000533333 IGHV3OR16-9A0A0B4J2B5 98 aa12.13□□□□□ -0.47
PAX6-228ENST00000533333 AGRNO00468 2067 aa12.13□□□□□ -0.47
PAX6-228ENST00000533333 KIAA1549LQ6ZVL6 1849 aa12.13□□□□□ -0.47
PAX6-228ENST00000533333 PCNX3Q9H6A9 2034 aa12.13□□□□□ -0.47
PAX6-228ENST00000533333 A0A1W2PPR1 153 aa12.13□□□□□ -0.47
PAX6-228ENST00000533333 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
PAX6-228ENST00000533333 BCE1O60756 84 aa12.12□□□□□ -0.47
PAX6-228ENST00000533333 FAM19A4Q96LR4 140 aa12.11□□□□□ -0.47
PAX6-228ENST00000533333 CDIP1Q9H305 208 aa12.1□□□□□ -0.47
PAX6-228ENST00000533333 Q6ZQT0 140 aa12.09□□□□□ -0.47
PAX6-228ENST00000533333 NCOR2Q9Y618 2525 aa12.07□□□□□ -0.48
PAX6-228ENST00000533333 H3BNG1 76 aa12.07□□□□□ -0.48
PAX6-228ENST00000533333 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
PAX6-228ENST00000533333 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
PAX6-228ENST00000533333 PRO3102Q9H379 93 aa12.06□□□□□ -0.48
PAX6-228ENST00000533333 IGLV6-57P01721 117 aa12.06□□□□□ -0.48
PAX6-228ENST00000533333 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
PAX6-228ENST00000533333 FAM218AQ96MZ4 157 aa12.05□□□□□ -0.48
PAX6-228ENST00000533333 C9orf92A6NGG3 77 aa12.05□□□□□ -0.48
PAX6-228ENST00000533333 UQCR11O14957 56 aa12.05□□□□□ -0.48
PAX6-228ENST00000533333 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
PAX6-228ENST00000533333 LINC00588Q9Y4M8 146 aa12.04□□□□□ -0.48
PAX6-228ENST00000533333 C9orf129Q5T035 196 aaKnown RBP12.03□□□□□ -0.48
PAX6-228ENST00000533333 LOC110117498A0A087WWA1 95 aa12.03□□□□□ -0.48
PAX6-228ENST00000533333 A8MWP4 228 aa12.03□□□□□ -0.48
PAX6-228ENST00000533333 LINC01554Q52M75 96 aa12.03□□□□□ -0.48
PAX6-228ENST00000533333 COA5Q86WW8 74 aa12.02□□□□□ -0.48
PAX6-228ENST00000533333 DSCR10P59022 87 aa12.02□□□□□ -0.49
PAX6-228ENST00000533333 MYO9AB2RTY4 2548 aa12.01□□□□□ -0.49
PAX6-228ENST00000533333 TRBV7-4A0A0J9YYF1 115 aa12.01□□□□□ -0.49
PAX6-228ENST00000533333 KRTAP24-1Q3LI83 254 aa12□□□□□ -0.49
PAX6-228ENST00000533333 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
PAX6-228ENST00000533333 TET2Q6N021 2002 aaPredicted RBP11.99□□□□□ -0.49
PAX6-228ENST00000533333 LINC00304Q8N9R0 145 aa11.98□□□□□ -0.49
PAX6-228ENST00000533333 JMJD1CQ15652 2540 aa11.98□□□□□ -0.49
PAX6-228ENST00000533333 MIR22HGQ0VDD5 57 aa11.97□□□□□ -0.49
PAX6-228ENST00000533333 OBSCN-AS1Q96MR7 158 aa11.97□□□□□ -0.49
PAX6-228ENST00000533333 FAM168BA1KXE4 195 aa11.96□□□□□ -0.49
PAX6-228ENST00000533333 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.5
PAX6-228ENST00000533333 RBM12B-AS1Q9P1G2 102 aa11.95□□□□□ -0.5
PAX6-228ENST00000533333 K7EQZ3 153 aa11.95□□□□□ -0.5
PAX6-228ENST00000533333 CEP192Q8TEP8 1941 aa11.94□□□□□ -0.5
PAX6-228ENST00000533333 A8MUN3 132 aa11.94□□□□□ -0.5
PAX6-228ENST00000533333 IGF2RP11717 2491 aa11.92□□□□□ -0.5
PAX6-228ENST00000533333 PTPRSQ13332 1948 aa11.92□□□□□ -0.5
PAX6-228ENST00000533333 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
PAX6-228ENST00000533333 RPS28P62857 69 aaKnown RBP11.91□□□□□ -0.5
PAX6-228ENST00000533333 A0A0D9SG42 100 aa11.9□□□□□ -0.5
PAX6-228ENST00000533333 CYP4F30PQ9H0H9 118 aa11.89□□□□□ -0.51
PAX6-228ENST00000533333 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
PAX6-228ENST00000533333 Q8NAQ8 132 aa11.87□□□□□ -0.51
PAX6-228ENST00000533333 SMR3BP02814 79 aaPredicted RBP11.87□□□□□ -0.51
PAX6-228ENST00000533333 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
PAX6-228ENST00000533333 MUC22E2RYF6 1773 aaPredicted RBP11.87□□□□□ -0.51
PAX6-228ENST00000533333 C8orf17Q9NRJ1 99 aa11.86□□□□□ -0.51
PAX6-228ENST00000533333 PIEZO2Q9H5I5 2752 aa11.85□□□□□ -0.51
PAX6-228ENST00000533333 ZFYVE26Q68DK2 2539 aa11.84□□□□□ -0.51
PAX6-228ENST00000533333 DNAH10OSP0CZ25 163 aa11.84□□□□□ -0.51
PAX6-228ENST00000533333 LUZP6Q538Z0 58 aa11.83□□□□□ -0.52
PAX6-228ENST00000533333 CDC42SE1Q9NRR8 79 aa11.83□□□□□ -0.52
PAX6-228ENST00000533333 IGLV1-50A0A075B6I6 118 aa11.81□□□□□ -0.52
PAX6-228ENST00000533333 IGFL1Q6UW32 110 aa11.8□□□□□ -0.52
PAX6-228ENST00000533333 A0A1B0GVX0 72 aa11.79□□□□□ -0.52
PAX6-228ENST00000533333 IGLV5-48A0A075B6I7 105 aa11.79□□□□□ -0.52
PAX6-228ENST00000533333 ZNF575Q86XF7 245 aa11.79□□□□□ -0.52
PAX6-228ENST00000533333 ZNF861PO60384 105 aa11.77□□□□□ -0.53
PAX6-228ENST00000533333 COL5A1P20908 1838 aaPredicted RBP11.76□□□□□ -0.53
PAX6-228ENST00000533333 PRR15Q8IV56 129 aa11.75□□□□□ -0.53
PAX6-228ENST00000533333 TLN2Q9Y4G6 2542 aa11.75□□□□□ -0.53
PAX6-228ENST00000533333 ABCA12Q86UK0 2595 aa11.75□□□□□ -0.53
PAX6-228ENST00000533333 LRP4O75096 1905 aa11.74□□□□□ -0.53
PAX6-228ENST00000533333 ADAMTS20P59510 1910 aa11.74□□□□□ -0.53
PAX6-228ENST00000533333 ERC2-IT1O76042 136 aa11.74□□□□□ -0.53
PAX6-228ENST00000533333 LRRK2Q5S007 2527 aa11.73□□□□□ -0.53
PAX6-228ENST00000533333 PRO0461Q9UI25 63 aa11.72□□□□□ -0.53
PAX6-228ENST00000533333 KCNQ1DNQ9H478 68 aa11.71□□□□□ -0.53
PAX6-228ENST00000533333 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.54
PAX6-228ENST00000533333 CHD8Q9HCK8 2581 aa11.7□□□□□ -0.54
PAX6-228ENST00000533333 TLN1Q9Y490 2541 aaKnown RBP11.7□□□□□ -0.54
PAX6-228ENST00000533333 Q8N1X5 172 aa11.7□□□□□ -0.54
PAX6-228ENST00000533333 EP400Q96L91 3159 aa11.69□□□□□ -0.54
PAX6-228ENST00000533333 CSNK1G2-AS1Q8NCQ2 148 aa11.69□□□□□ -0.54
PAX6-228ENST00000533333 F8P00451 2351 aa11.69□□□□□ -0.54
PAX6-228ENST00000533333 FN1P02751 2386 aaKnown RBP11.68□□□□□ -0.54
PAX6-228ENST00000533333 M0R2T5 61 aa11.68□□□□□ -0.54
PAX6-228ENST00000533333 ZNF462Q96JM2 2506 aa11.68□□□□□ -0.54
PAX6-228ENST00000533333 C10orf142B7Z368 130 aa11.67□□□□□ -0.54
PAX6-228ENST00000533333 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
PAX6-228ENST00000533333 CAMK2N1Q7Z7J9 78 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms