RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TSPEAR-AS2P59090 65 aa12.46□□□□□ -0.41
CCS-208ENST00000533244 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
CCS-208ENST00000533244 HERV-K104P63124 156 aa12.45□□□□□ -0.42
CCS-208ENST00000533244 LINC00167Q96N53 147 aa12.45□□□□□ -0.42
CCS-208ENST00000533244 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
CCS-208ENST00000533244 VPREB1P12018 145 aa12.45□□□□□ -0.42
CCS-208ENST00000533244 PLEKHB2Q96CS7 222 aa12.45□□□□□ -0.42
CCS-208ENST00000533244 LINC00158P58513 81 aa12.44□□□□□ -0.42
CCS-208ENST00000533244 MYMXA0A1B0GTQ4 84 aa12.43□□□□□ -0.42
CCS-208ENST00000533244 HERVK_113P61574 105 aa12.43□□□□□ -0.42
CCS-208ENST00000533244 NKAPP1Q8N9T2 125 aa12.43□□□□□ -0.42
CCS-208ENST00000533244 Q8NDZ9 215 aa12.43□□□□□ -0.42
CCS-208ENST00000533244 SMIM13P0DJ93 91 aa12.42□□□□□ -0.42
CCS-208ENST00000533244 LINC01545Q5VT33 79 aa12.42□□□□□ -0.42
CCS-208ENST00000533244 DIRC1Q969H9 104 aa12.42□□□□□ -0.42
CCS-208ENST00000533244 J3QQQ9 107 aa12.41□□□□□ -0.42
CCS-208ENST00000533244 PET117Q6UWS5 81 aa12.41□□□□□ -0.42
CCS-208ENST00000533244 A0A0U1RRA0 63 aa12.4□□□□□ -0.42
CCS-208ENST00000533244 GAGE10A6NGK3 116 aa12.4□□□□□ -0.42
CCS-208ENST00000533244 H0Y9J4 135 aa12.4□□□□□ -0.42
CCS-208ENST00000533244 RPL24P83731 157 aaKnown RBP12.4□□□□□ -0.42
CCS-208ENST00000533244 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
CCS-208ENST00000533244 RPL37AP8A6NKH3 93 aa12.39□□□□□ -0.43
CCS-208ENST00000533244 LINC00587B1AMM8 73 aa12.39□□□□□ -0.43
CCS-208ENST00000533244 C3orf79P0CE67 100 aa12.39□□□□□ -0.43
CCS-208ENST00000533244 E9PLD3 99 aa12.38□□□□□ -0.43
CCS-208ENST00000533244 NMUP48645 174 aa12.38□□□□□ -0.43
CCS-208ENST00000533244 ZNF861PO60384 105 aa12.37□□□□□ -0.43
CCS-208ENST00000533244 BCE1O60756 84 aa12.37□□□□□ -0.43
CCS-208ENST00000533244 KRTAP10-8P60410 259 aa12.37□□□□□ -0.43
CCS-208ENST00000533244 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
CCS-208ENST00000533244 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
CCS-208ENST00000533244 LGALS3P17931 250 aaKnown RBP12.36□□□□□ -0.43
CCS-208ENST00000533244 IGKV2-28A0A075B6P5 120 aa12.34□□□□□ -0.43
CCS-208ENST00000533244 IGKV2D-28P01615 120 aa12.34□□□□□ -0.43
CCS-208ENST00000533244 LOC107984156A0A0G2JMH3 177 aa12.32□□□□□ -0.44
CCS-208ENST00000533244 KRTAP1-4P0C5Y4 121 aa12.32□□□□□ -0.44
CCS-208ENST00000533244 KRTDAPP60985 99 aa12.32□□□□□ -0.44
CCS-208ENST00000533244 KRTAP13-1Q8IUC0 172 aa12.32□□□□□ -0.44
CCS-208ENST00000533244 ARL17AQ8IVW1 177 aa12.32□□□□□ -0.44
CCS-208ENST00000533244 HMCN2Q8NDA2 5059 aa12.3□□□□□ -0.44
CCS-208ENST00000533244 RPL28P46779 137 aaKnown RBP12.3□□□□□ -0.44
CCS-208ENST00000533244 BOD1L2Q8IYS8 172 aa12.3□□□□□ -0.44
CCS-208ENST00000533244 M0R378 163 aa12.29□□□□□ -0.44
CCS-208ENST00000533244 A0A0J9YXY3 114 aa12.28□□□□□ -0.44
CCS-208ENST00000533244 DAND5Q8N907 189 aa12.28□□□□□ -0.44
CCS-208ENST00000533244 TMEM126AQ9H061 195 aa12.28□□□□□ -0.44
CCS-208ENST00000533244 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.45
CCS-208ENST00000533244 TMEM238C9JI98 176 aa12.27□□□□□ -0.45
CCS-208ENST00000533244 HIST3H2BBQ8N257 126 aa12.27□□□□□ -0.45
CCS-208ENST00000533244 C20orf202A1L168 122 aa12.26□□□□□ -0.45
CCS-208ENST00000533244 PRR26Q8N8Z3 221 aa12.25□□□□□ -0.45
CCS-208ENST00000533244 NCR3O14931 201 aa12.24□□□□□ -0.45
CCS-208ENST00000533244 UBE2AP49459 152 aa12.24□□□□□ -0.45
CCS-208ENST00000533244 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
CCS-208ENST00000533244 ADAMTSL4-AS1Q5T5F5 129 aa12.23□□□□□ -0.45
CCS-208ENST00000533244 LITAFQ99732 161 aa12.22□□□□□ -0.45
CCS-208ENST00000533244 SOSTDC1Q6X4U4 206 aa12.21□□□□□ -0.45
CCS-208ENST00000533244 TRBV10-2A0A0K0K1G8 114 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 TIMM17BO60830 172 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 NDUFC2O95298 119 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 AKR1D1P51857 326 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 PRLHP81277 87 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 FAM19A1Q7Z5A9 133 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 TTTY13Q9BZ97 58 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 KCNQ1DNQ9H478 68 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 ZNF815PA8K554 130 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 PRYO14603 147 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 EIF4EBP3O60516 100 aaPredicted RBP12.2□□□□□ -0.46
CCS-208ENST00000533244 SPRR1AP35321 89 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 ANKRD39Q53RE8 183 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 MIEN1Q9BRT3 115 aa12.2□□□□□ -0.46
CCS-208ENST00000533244 S100A2P29034 98 aa12.19□□□□□ -0.46
CCS-208ENST00000533244 ATOH7Q8N100 152 aa12.19□□□□□ -0.46
CCS-208ENST00000533244 TRBV10-3A0A0K0K1G6 114 aa12.18□□□□□ -0.46
CCS-208ENST00000533244 S100A6P06703 90 aa12.18□□□□□ -0.46
CCS-208ENST00000533244 SPANXB1Q9NS25 103 aaPredicted RBP12.18□□□□□ -0.46
CCS-208ENST00000533244 KRTAP4-16G5E9R7 235 aaPredicted RBP12.16□□□□□ -0.46
CCS-208ENST00000533244 RPL13AP40429 203 aaKnown RBP12.16□□□□□ -0.46
CCS-208ENST00000533244 LINC00337Q8N6G1 96 aa12.16□□□□□ -0.46
CCS-208ENST00000533244 NPC2P61916 151 aa12.15□□□□□ -0.46
CCS-208ENST00000533244 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
CCS-208ENST00000533244 DDTP30046 118 aa12.13□□□□□ -0.47
CCS-208ENST00000533244 SNRPEP62304 92 aaKnown RBP12.13□□□□□ -0.47
CCS-208ENST00000533244 A0A087X002 238 aa12.12□□□□□ -0.47
CCS-208ENST00000533244 IGLV6-57P01721 117 aa12.12□□□□□ -0.47
CCS-208ENST00000533244 C5orf52A6NGY3 159 aa12.11□□□□□ -0.47
CCS-208ENST00000533244 SPANXCQ9NY87 97 aa12.11□□□□□ -0.47
CCS-208ENST00000533244 CRYGAP11844 174 aa12.1□□□□□ -0.47
CCS-208ENST00000533244 S100A12P80511 92 aa12.1□□□□□ -0.47
CCS-208ENST00000533244 FAM229BQ4G0N7 80 aa12.1□□□□□ -0.47
CCS-208ENST00000533244 HIGD2AQ9BW72 106 aa12.1□□□□□ -0.47
CCS-208ENST00000533244 PCP2Q8IVA1 136 aa12.09□□□□□ -0.47
CCS-208ENST00000533244 SPANXDQ9BXN6 97 aa12.09□□□□□ -0.47
CCS-208ENST00000533244 ANAPC11Q9NYG5 84 aa12.09□□□□□ -0.47
CCS-208ENST00000533244 ETDCA0A1B0GVM5 59 aa12.08□□□□□ -0.48
CCS-208ENST00000533244 SCGB1D4Q6XE38 83 aa12.08□□□□□ -0.48
CCS-208ENST00000533244 S100A7L2Q5SY68 101 aa12.07□□□□□ -0.48
CCS-208ENST00000533244 B5MCH6 92 aa12.06□□□□□ -0.48
CCS-208ENST00000533244 KRTAP13-2Q52LG2 175 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms