RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 TYMSOSQ8TAI1 123 aa13.84□□□□□ -0.19
SMPD1-209ENST00000533196 FAM19A1Q7Z5A9 133 aa13.82□□□□□ -0.2
SMPD1-209ENST00000533196 CBLN2Q8IUK8 224 aa13.82□□□□□ -0.2
SMPD1-209ENST00000533196 PRR4Q16378 134 aa13.8□□□□□ -0.2
SMPD1-209ENST00000533196 Q8NDZ9 215 aa13.8□□□□□ -0.2
SMPD1-209ENST00000533196 LINC00587B1AMM8 73 aa13.79□□□□□ -0.2
SMPD1-209ENST00000533196 TMEM238C9JI98 176 aa13.79□□□□□ -0.2
SMPD1-209ENST00000533196 M0R378 163 aa13.79□□□□□ -0.2
SMPD1-209ENST00000533196 HERV-K104P63124 156 aa13.79□□□□□ -0.2
SMPD1-209ENST00000533196 PRLHP81277 87 aa13.79□□□□□ -0.2
SMPD1-209ENST00000533196 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
SMPD1-209ENST00000533196 ATP6V1G1O75348 118 aa13.78□□□□□ -0.2
SMPD1-209ENST00000533196 TRGC2P03986 189 aa13.77□□□□□ -0.21
SMPD1-209ENST00000533196 ANAPC11Q9NYG5 84 aa13.76□□□□□ -0.21
SMPD1-209ENST00000533196 A0A0U1RRA0 63 aa13.75□□□□□ -0.21
SMPD1-209ENST00000533196 LEPROTL1O95214 131 aa13.75□□□□□ -0.21
SMPD1-209ENST00000533196 TSPAN13O95857 204 aa13.75□□□□□ -0.21
SMPD1-209ENST00000533196 SMIM13P0DJ93 91 aa13.75□□□□□ -0.21
SMPD1-209ENST00000533196 KRTAP13-2Q52LG2 175 aa13.75□□□□□ -0.21
SMPD1-209ENST00000533196 MEIG1Q5JSS6 88 aa13.75□□□□□ -0.21
SMPD1-209ENST00000533196 MYMXA0A1B0GTQ4 84 aa13.73□□□□□ -0.21
SMPD1-209ENST00000533196 NDUFA12Q9UI09 145 aa13.73□□□□□ -0.21
SMPD1-209ENST00000533196 IGKV2D-26A0A0A0MRZ7 120 aa13.72□□□□□ -0.21
SMPD1-209ENST00000533196 MAP1LC3CQ9BXW4 147 aa13.72□□□□□ -0.21
SMPD1-209ENST00000533196 SERF1AO75920 110 aa13.71□□□□□ -0.21
SMPD1-209ENST00000533196 CTAG1AP78358 180 aa13.71□□□□□ -0.21
SMPD1-209ENST00000533196 BOD1L2Q8IYS8 172 aa13.71□□□□□ -0.21
SMPD1-209ENST00000533196 MIR7-3HGQ8N6C7 128 aa13.71□□□□□ -0.21
SMPD1-209ENST00000533196 PLEKHB2Q96CS7 222 aa13.71□□□□□ -0.21
SMPD1-209ENST00000533196 PLNP26678 52 aa13.7□□□□□ -0.22
SMPD1-209ENST00000533196 LINC00310P59036 64 aa13.7□□□□□ -0.22
SMPD1-209ENST00000533196 H0Y8G0 127 aa13.69□□□□□ -0.22
SMPD1-209ENST00000533196 PRYO14603 147 aa13.69□□□□□ -0.22
SMPD1-209ENST00000533196 LINC00304Q8N9R0 145 aa13.69□□□□□ -0.22
SMPD1-209ENST00000533196 HSPB8Q9UJY1 196 aa13.69□□□□□ -0.22
SMPD1-209ENST00000533196 HIGD2AQ9BW72 106 aa13.68□□□□□ -0.22
SMPD1-209ENST00000533196 LEPROTO15243 131 aa13.67□□□□□ -0.22
SMPD1-209ENST00000533196 KCNQ1DNQ9H478 68 aa13.66□□□□□ -0.22
SMPD1-209ENST00000533196 LINC00337Q8N6G1 96 aa13.65□□□□□ -0.22
SMPD1-209ENST00000533196 LOC107984156A0A0G2JMH3 177 aa13.64□□□□□ -0.23
SMPD1-209ENST00000533196 DPM2O94777 84 aa13.64□□□□□ -0.23
SMPD1-209ENST00000533196 SPRR1AP35321 89 aa13.64□□□□□ -0.23
SMPD1-209ENST00000533196 HERVK_113P61574 105 aa13.64□□□□□ -0.23
SMPD1-209ENST00000533196 ARL17AQ8IVW1 177 aa13.64□□□□□ -0.23
SMPD1-209ENST00000533196 ZNF706Q9Y5V0 76 aaPredicted RBP13.64□□□□□ -0.23
SMPD1-209ENST00000533196 COLCA2A8K830 154 aa13.63□□□□□ -0.23
SMPD1-209ENST00000533196 NCR3O14931 201 aa13.63□□□□□ -0.23
SMPD1-209ENST00000533196 NMUP48645 174 aa13.63□□□□□ -0.23
SMPD1-209ENST00000533196 TSPEAR-AS2P59090 65 aa13.62□□□□□ -0.23
SMPD1-209ENST00000533196 S100A12P80511 92 aa13.62□□□□□ -0.23
SMPD1-209ENST00000533196 SPRR4Q96PI1 79 aa13.62□□□□□ -0.23
SMPD1-209ENST00000533196 J3QQQ9 107 aa13.61□□□□□ -0.23
SMPD1-209ENST00000533196 FABP4P15090 132 aa13.61□□□□□ -0.23
SMPD1-209ENST00000533196 SLC7A5P1Q8MH63 180 aa13.61□□□□□ -0.23
SMPD1-209ENST00000533196 IGKCP01834 107 aa13.6□□□□□ -0.23
SMPD1-209ENST00000533196 ETDCA0A1B0GVM5 59 aa13.59□□□□□ -0.23
SMPD1-209ENST00000533196 TRBV10-3A0A0K0K1G6 114 aa13.58□□□□□ -0.24
SMPD1-209ENST00000533196 TRBV10-2A0A0K0K1G8 114 aa13.58□□□□□ -0.24
SMPD1-209ENST00000533196 KRTAP4-16G5E9R7 235 aaPredicted RBP13.58□□□□□ -0.24
SMPD1-209ENST00000533196 LGALS3P17931 250 aaKnown RBP13.58□□□□□ -0.24
SMPD1-209ENST00000533196 SPAG11AQ6PDA7 123 aa13.57□□□□□ -0.24
SMPD1-209ENST00000533196 C3orf22Q8N5N4 141 aa13.56□□□□□ -0.24
SMPD1-209ENST00000533196 PMCHL2Q9BQD1 86 aa13.55□□□□□ -0.24
SMPD1-209ENST00000533196 MIEN1Q9BRT3 115 aa13.55□□□□□ -0.24
SMPD1-209ENST00000533196 DAND5Q8N907 189 aa13.54□□□□□ -0.24
SMPD1-209ENST00000533196 SMCR5Q8TEV8 140 aa13.54□□□□□ -0.24
SMPD1-209ENST00000533196 SPANXB1Q9NS25 103 aaPredicted RBP13.53□□□□□ -0.24
SMPD1-209ENST00000533196 NDUFC2O95298 119 aa13.52□□□□□ -0.25
SMPD1-209ENST00000533196 DDTP30046 118 aa13.52□□□□□ -0.25
SMPD1-209ENST00000533196 RETNLBQ9BQ08 111 aa13.52□□□□□ -0.25
SMPD1-209ENST00000533196 B5MCH6 92 aa13.49□□□□□ -0.25
SMPD1-209ENST00000533196 E9PLD3 99 aa13.49□□□□□ -0.25
SMPD1-209ENST00000533196 TPRXLQ17RH7 258 aa13.48□□□□□ -0.25
SMPD1-209ENST00000533196 LINC00483Q53H64 154 aa13.48□□□□□ -0.25
SMPD1-209ENST00000533196 C4orf48Q5BLP8 95 aa13.48□□□□□ -0.25
SMPD1-209ENST00000533196 IGLV7-46A0A075B6I9 117 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 A0A0J9YXY3 114 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 SYS1-DBNDD2H3BUS1 97 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BKO60814 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BJP06899 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BOP23527 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BBP33778 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BDP58876 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BCP62807 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST2H2BEQ16778 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BHQ93079 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BNQ99877 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 HIST1H2BMQ99879 126 aa13.46□□□□□ -0.25
SMPD1-209ENST00000533196 MUC2Q02817 5179 aa13.45□□□□□ -0.26
SMPD1-209ENST00000533196 IGLV6-57P01721 117 aa13.45□□□□□ -0.26
SMPD1-209ENST00000533196 S100A7L2Q5SY68 101 aa13.45□□□□□ -0.26
SMPD1-209ENST00000533196 Q6ZRX8 168 aa13.44□□□□□ -0.26
SMPD1-209ENST00000533196 A0A0U1RQV1 116 aa13.43□□□□□ -0.26
SMPD1-209ENST00000533196 PPDPFQ9H3Y8 114 aa13.43□□□□□ -0.26
SMPD1-209ENST00000533196 Q8NBF4 154 aa13.42□□□□□ -0.26
SMPD1-209ENST00000533196 CDIP1Q9H305 208 aa13.42□□□□□ -0.26
SMPD1-209ENST00000533196 CBY1Q9Y3M2 126 aa13.42□□□□□ -0.26
SMPD1-209ENST00000533196 JOSD1Q15040 202 aaPredicted RBP13.41□□□□□ -0.26
SMPD1-209ENST00000533196 GAGE2AQ6NT46 116 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms