RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 Q8NDZ9 215 aa13.13□□□□□ -0.31
GSDMD-212ENST00000533063 CBY1Q9Y3M2 126 aa13.13□□□□□ -0.31
GSDMD-212ENST00000533063 KMT2CQ8NEZ4 4911 aaKnown RBP13.12□□□□□ -0.31
GSDMD-212ENST00000533063 TLX1NBP0CAT3 122 aa13.12□□□□□ -0.31
GSDMD-212ENST00000533063 COPS9Q8WXC6 57 aa13.12□□□□□ -0.31
GSDMD-212ENST00000533063 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
GSDMD-212ENST00000533063 DNAH11Q96DT5 4516 aa13.09□□□□□ -0.31
GSDMD-212ENST00000533063 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
GSDMD-212ENST00000533063 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
GSDMD-212ENST00000533063 A0A0B4J2C4 111 aa13.09□□□□□ -0.31
GSDMD-212ENST00000533063 TNP2Q05952 138 aa13.09□□□□□ -0.31
GSDMD-212ENST00000533063 GAGE2EQ4V326 116 aa13.09□□□□□ -0.31
GSDMD-212ENST00000533063 GAGE2DQ9UEU5 116 aa13.09□□□□□ -0.31
GSDMD-212ENST00000533063 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
GSDMD-212ENST00000533063 RAB37Q96AX2 223 aa13.08□□□□□ -0.32
GSDMD-212ENST00000533063 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
GSDMD-212ENST00000533063 RPL18AQ02543 176 aaKnown RBP13.06□□□□□ -0.32
GSDMD-212ENST00000533063 PRR3P79522 188 aaKnown RBP13.06□□□□□ -0.32
GSDMD-212ENST00000533063 VAMP3Q15836 100 aa13.06□□□□□ -0.32
GSDMD-212ENST00000533063 C9orf163Q8N9P6 203 aa13.06□□□□□ -0.32
GSDMD-212ENST00000533063 FUSP35637 526 aaKnown RBP eCLIP13.04□□□□□ -0.32
GSDMD-212ENST00000533063 LINC01620Q4KN68 170 aa13.04□□□□□ -0.32
GSDMD-212ENST00000533063 LINC00337Q8N6G1 96 aa13.04□□□□□ -0.32
GSDMD-212ENST00000533063 PRO1854Q9UHT4 67 aa13.04□□□□□ -0.32
GSDMD-212ENST00000533063 LOC107984640A0A0U1RRK4 108 aa13.04□□□□□ -0.32
GSDMD-212ENST00000533063 NDUFC2O95298 119 aa13.04□□□□□ -0.32
GSDMD-212ENST00000533063 PKD1P98161 4303 aa13.03□□□□□ -0.32
GSDMD-212ENST00000533063 RYR2Q92736 4967 aa13.03□□□□□ -0.32
GSDMD-212ENST00000533063 NAA38Q9BRA0 125 aaKnown RBP13.02□□□□□ -0.33
GSDMD-212ENST00000533063 A0A096LNI7 61 aa13.01□□□□□ -0.33
GSDMD-212ENST00000533063 GAGE2BQ13066 116 aa13.01□□□□□ -0.33
GSDMD-212ENST00000533063 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
GSDMD-212ENST00000533063 DNAH5Q8TE73 4624 aa13.01□□□□□ -0.33
GSDMD-212ENST00000533063 TSPAN13O95857 204 aa13□□□□□ -0.33
GSDMD-212ENST00000533063 VPREB1P12018 145 aa12.99□□□□□ -0.33
GSDMD-212ENST00000533063 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
GSDMD-212ENST00000533063 SDIM1Q6ZPB5 146 aa12.99□□□□□ -0.33
GSDMD-212ENST00000533063 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
GSDMD-212ENST00000533063 C16orf90A8MZG2 172 aa12.98□□□□□ -0.33
GSDMD-212ENST00000533063 RPL13AP40429 203 aaKnown RBP12.98□□□□□ -0.33
GSDMD-212ENST00000533063 FAM168BA1KXE4 195 aa12.97□□□□□ -0.33
GSDMD-212ENST00000533063 NCR3O14931 201 aa12.97□□□□□ -0.33
GSDMD-212ENST00000533063 SERTAD4-AS1Q5TG53 156 aa12.97□□□□□ -0.33
GSDMD-212ENST00000533063 H3BUT2 72 aa12.97□□□□□ -0.33
GSDMD-212ENST00000533063 H7C2G1 150 aa12.97□□□□□ -0.33
GSDMD-212ENST00000533063 TRAV13-2A0A0B4J235 113 aa12.95□□□□□ -0.34
GSDMD-212ENST00000533063 IGKV2-24A0A0C4DH68 120 aa12.95□□□□□ -0.34
GSDMD-212ENST00000533063 CHTF8P0CG12 524 aa12.95□□□□□ -0.34
GSDMD-212ENST00000533063 KRTAP10-2P60368 255 aa12.95□□□□□ -0.34
GSDMD-212ENST00000533063 PLA2G2DQ9UNK4 145 aa12.95□□□□□ -0.34
GSDMD-212ENST00000533063 PANO1I0J062 215 aa12.93□□□□□ -0.34
GSDMD-212ENST00000533063 TRBV10-2A0A0K0K1G8 114 aa12.92□□□□□ -0.34
GSDMD-212ENST00000533063 GTF2H5Q6ZYL4 71 aa12.92□□□□□ -0.34
GSDMD-212ENST00000533063 IGLV5-52A0A0A0MRZ9 124 aa12.92□□□□□ -0.34
GSDMD-212ENST00000533063 A0A1W2PPM0 123 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 GAGE10A6NGK3 116 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 OCIAD2Q56VL3 154 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 OR13C6PQ8NH95 151 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 IGLV5-37A0A075B6J1 123 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 A0A1W2PNN7 141 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 K7EP34 96 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 IGLV6-57P01721 117 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 Q1RN00 199 aa12.9□□□□□ -0.34
GSDMD-212ENST00000533063 TRIAP1O43715 76 aa12.88□□□□□ -0.35
GSDMD-212ENST00000533063 SMIM11BQ8TCY0 68 aa12.88□□□□□ -0.35
GSDMD-212ENST00000533063 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.88□□□□□ -0.35
GSDMD-212ENST00000533063 TRBV10-3A0A0K0K1G6 114 aa12.88□□□□□ -0.35
GSDMD-212ENST00000533063 M0R378 163 aa12.88□□□□□ -0.35
GSDMD-212ENST00000533063 FAM19A5Q7Z5A7 132 aaPredicted RBP12.88□□□□□ -0.35
GSDMD-212ENST00000533063 TMEM126AQ9H061 195 aa12.88□□□□□ -0.35
GSDMD-212ENST00000533063 PKIGQ9Y2B9 76 aa12.87□□□□□ -0.35
GSDMD-212ENST00000533063 K7ERU9 68 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 RPL28P46779 137 aaKnown RBP12.85□□□□□ -0.35
GSDMD-212ENST00000533063 S100A7L2Q5SY68 101 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 C7orf33Q8WU49 177 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 C22orf24Q9Y442 160 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 PCP4P48539 62 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 NKAPP1Q8N9T2 125 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 DNAH8Q96JB1 4490 aa12.85□□□□□ -0.35
GSDMD-212ENST00000533063 PKHD1P08F94 4074 aa12.84□□□□□ -0.35
GSDMD-212ENST00000533063 RYR3Q15413 4870 aa12.84□□□□□ -0.35
GSDMD-212ENST00000533063 FABP2P12104 132 aa12.83□□□□□ -0.36
GSDMD-212ENST00000533063 PSMB2P49721 201 aa12.83□□□□□ -0.36
GSDMD-212ENST00000533063 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
GSDMD-212ENST00000533063 LINC00474Q9P2X8 69 aa12.83□□□□□ -0.36
GSDMD-212ENST00000533063 MRPL55Q7Z7F7 128 aaKnown RBP12.81□□□□□ -0.36
GSDMD-212ENST00000533063 LINC00167Q96N53 147 aa12.81□□□□□ -0.36
GSDMD-212ENST00000533063 EPM2AB3EWF7 344 aa12.8□□□□□ -0.36
GSDMD-212ENST00000533063 M0QXV9 152 aa12.8□□□□□ -0.36
GSDMD-212ENST00000533063 SPCS1Q9Y6A9 102 aa12.79□□□□□ -0.36
GSDMD-212ENST00000533063 IGLV1-50A0A075B6I6 118 aa12.78□□□□□ -0.36
GSDMD-212ENST00000533063 TRAV23DV6A0A075B6W5 121 aa12.78□□□□□ -0.36
GSDMD-212ENST00000533063 A0A1B0GVY2 172 aa12.78□□□□□ -0.36
GSDMD-212ENST00000533063 RPL37AP8A6NKH3 93 aa12.78□□□□□ -0.36
GSDMD-212ENST00000533063 TCL1BO95988 128 aa12.77□□□□□ -0.37
GSDMD-212ENST00000533063 SCGB1C2P0DMR2 95 aa12.77□□□□□ -0.37
GSDMD-212ENST00000533063 A0A087WYN8 130 aa12.76□□□□□ -0.37
GSDMD-212ENST00000533063 KRTAP10-1P60331 282 aa12.76□□□□□ -0.37
GSDMD-212ENST00000533063 C6orf99Q4VX62 202 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms