RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 CEND1Q8N111 149 aa12.9□□□□□ -0.34
CHID1-220ENST00000532909 PCP4L1A6NKN8 68 aa12.89□□□□□ -0.35
CHID1-220ENST00000532909 C9orf163Q8N9P6 203 aa12.89□□□□□ -0.35
CHID1-220ENST00000532909 LINC00308Q8TCZ7 52 aa12.89□□□□□ -0.35
CHID1-220ENST00000532909 LINC00474Q9P2X8 69 aa12.89□□□□□ -0.35
CHID1-220ENST00000532909 ADAMTSL4-AS1Q5T5F5 129 aa12.88□□□□□ -0.35
CHID1-220ENST00000532909 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
CHID1-220ENST00000532909 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.87□□□□□ -0.35
CHID1-220ENST00000532909 A0A0U1RRA0 63 aa12.86□□□□□ -0.35
CHID1-220ENST00000532909 A6NDN8 102 aa12.86□□□□□ -0.35
CHID1-220ENST00000532909 NDUFC2O95298 119 aa12.86□□□□□ -0.35
CHID1-220ENST00000532909 SLPIP03973 132 aa12.86□□□□□ -0.35
CHID1-220ENST00000532909 C9orf116Q5BN46 136 aaPredicted RBP12.85□□□□□ -0.35
CHID1-220ENST00000532909 MUSTN1Q8IVN3 82 aa12.85□□□□□ -0.35
CHID1-220ENST00000532909 SND1-IT1Q9HBX3 110 aa12.85□□□□□ -0.35
CHID1-220ENST00000532909 APOBP04114 4563 aaKnown RBP12.84□□□□□ -0.35
CHID1-220ENST00000532909 IGLV5-52A0A0A0MRZ9 124 aa12.83□□□□□ -0.36
CHID1-220ENST00000532909 RPL18AQ02543 176 aaKnown RBP12.83□□□□□ -0.36
CHID1-220ENST00000532909 DNAH5Q8TE73 4624 aa12.82□□□□□ -0.36
CHID1-220ENST00000532909 BVES-AS1Q5T3Y7 98 aa12.82□□□□□ -0.36
CHID1-220ENST00000532909 DAND5Q8N907 189 aa12.82□□□□□ -0.36
CHID1-220ENST00000532909 Q6ZRP5 223 aa12.81□□□□□ -0.36
CHID1-220ENST00000532909 CBY1Q9Y3M2 126 aa12.81□□□□□ -0.36
CHID1-220ENST00000532909 EPM2AB3EWF7 344 aa12.8□□□□□ -0.36
CHID1-220ENST00000532909 HINT1P49773 126 aaPredicted RBP12.8□□□□□ -0.36
CHID1-220ENST00000532909 PLA2G2DQ9UNK4 145 aa12.8□□□□□ -0.36
CHID1-220ENST00000532909 A0A0B4J2C4 111 aa12.78□□□□□ -0.36
CHID1-220ENST00000532909 A4D1N5 150 aa12.78□□□□□ -0.36
CHID1-220ENST00000532909 GAGE2EQ4V326 116 aa12.78□□□□□ -0.36
CHID1-220ENST00000532909 LBHQ53QV2 105 aaPredicted RBP12.78□□□□□ -0.36
CHID1-220ENST00000532909 GAGE2DQ9UEU5 116 aa12.78□□□□□ -0.36
CHID1-220ENST00000532909 TRAV13-2A0A0B4J235 113 aa12.77□□□□□ -0.37
CHID1-220ENST00000532909 TRBV10-2A0A0K0K1G8 114 aa12.77□□□□□ -0.37
CHID1-220ENST00000532909 FXYD2P54710 66 aa12.76□□□□□ -0.37
CHID1-220ENST00000532909 KRTAP10-1P60331 282 aa12.76□□□□□ -0.37
CHID1-220ENST00000532909 GAGE2BQ13066 116 aa12.76□□□□□ -0.37
CHID1-220ENST00000532909 RAB37Q96AX2 223 aa12.76□□□□□ -0.37
CHID1-220ENST00000532909 XGP55808 180 aa12.75□□□□□ -0.37
CHID1-220ENST00000532909 NPC2P61916 151 aa12.75□□□□□ -0.37
CHID1-220ENST00000532909 SOSTDC1Q6X4U4 206 aa12.75□□□□□ -0.37
CHID1-220ENST00000532909 SDIM1Q6ZPB5 146 aa12.75□□□□□ -0.37
CHID1-220ENST00000532909 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
CHID1-220ENST00000532909 XAGE1AQ9HD64 81 aa12.74□□□□□ -0.37
CHID1-220ENST00000532909 BATFQ16520 125 aa12.73□□□□□ -0.37
CHID1-220ENST00000532909 COL5A1-AS1Q5SY13 56 aa12.73□□□□□ -0.37
CHID1-220ENST00000532909 NHP2Q9NX24 153 aaKnown RBP12.73□□□□□ -0.37
CHID1-220ENST00000532909 NKAPP1Q8N9T2 125 aa12.72□□□□□ -0.37
CHID1-220ENST00000532909 IGLV5-37A0A075B6J1 123 aa12.71□□□□□ -0.37
CHID1-220ENST00000532909 INAFM2P0DMQ5 153 aa12.71□□□□□ -0.37
CHID1-220ENST00000532909 SNHG12Q9BXW3 62 aa12.71□□□□□ -0.37
CHID1-220ENST00000532909 PRO1854Q9UHT4 67 aa12.71□□□□□ -0.37
CHID1-220ENST00000532909 A0A096LNI7 61 aa12.7□□□□□ -0.38
CHID1-220ENST00000532909 C9orf129Q5T035 196 aaKnown RBP12.7□□□□□ -0.38
CHID1-220ENST00000532909 Q5VSD8 79 aa12.7□□□□□ -0.38
CHID1-220ENST00000532909 TMEM126AQ9H061 195 aa12.7□□□□□ -0.38
CHID1-220ENST00000532909 M0R378 163 aa12.69□□□□□ -0.38
CHID1-220ENST00000532909 SMR3BP02814 79 aaPredicted RBP12.69□□□□□ -0.38
CHID1-220ENST00000532909 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
CHID1-220ENST00000532909 CFC1P0CG37 223 aa12.69□□□□□ -0.38
CHID1-220ENST00000532909 VPREB1P12018 145 aa12.68□□□□□ -0.38
CHID1-220ENST00000532909 HAMPP81172 84 aa12.68□□□□□ -0.38
CHID1-220ENST00000532909 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
CHID1-220ENST00000532909 IGKV2-24A0A0C4DH68 120 aa12.67□□□□□ -0.38
CHID1-220ENST00000532909 S100A7L2Q5SY68 101 aa12.67□□□□□ -0.38
CHID1-220ENST00000532909 EIF4EBP3O60516 100 aaPredicted RBP12.66□□□□□ -0.38
CHID1-220ENST00000532909 SPACA4Q8TDM5 124 aa12.65□□□□□ -0.38
CHID1-220ENST00000532909 DPH3Q96FX2 82 aa12.65□□□□□ -0.38
CHID1-220ENST00000532909 IGKV2-28A0A075B6P5 120 aa12.63□□□□□ -0.39
CHID1-220ENST00000532909 IGKV2D-28P01615 120 aa12.63□□□□□ -0.39
CHID1-220ENST00000532909 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
CHID1-220ENST00000532909 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
CHID1-220ENST00000532909 LYRM7Q5U5X0 104 aa12.62□□□□□ -0.39
CHID1-220ENST00000532909 FLG2Q5D862 2391 aaPredicted RBP12.61□□□□□ -0.39
CHID1-220ENST00000532909 RPL13AP40429 203 aaKnown RBP12.61□□□□□ -0.39
CHID1-220ENST00000532909 MRPL55Q7Z7F7 128 aaKnown RBP12.61□□□□□ -0.39
CHID1-220ENST00000532909 NCR3O14931 201 aa12.6□□□□□ -0.39
CHID1-220ENST00000532909 IGLV6-57P01721 117 aa12.6□□□□□ -0.39
CHID1-220ENST00000532909 COX6CP09669 75 aa12.6□□□□□ -0.39
CHID1-220ENST00000532909 Q1RN00 199 aa12.6□□□□□ -0.39
CHID1-220ENST00000532909 LINC00337Q8N6G1 96 aa12.6□□□□□ -0.39
CHID1-220ENST00000532909 SRRM2Q9UQ35 2752 aaKnown RBP12.59□□□□□ -0.39
CHID1-220ENST00000532909 M0QXV9 152 aa12.59□□□□□ -0.39
CHID1-220ENST00000532909 FAM19A5Q7Z5A7 132 aaPredicted RBP12.59□□□□□ -0.39
CHID1-220ENST00000532909 C22orf24Q9Y442 160 aa12.59□□□□□ -0.39
CHID1-220ENST00000532909 FAT1Q14517 4588 aa12.59□□□□□ -0.39
CHID1-220ENST00000532909 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
CHID1-220ENST00000532909 SERTAD4-AS1Q5TG53 156 aa12.58□□□□□ -0.4
CHID1-220ENST00000532909 PLAC8Q9NZF1 115 aa12.58□□□□□ -0.4
CHID1-220ENST00000532909 HERC1Q15751 4861 aa12.57□□□□□ -0.4
CHID1-220ENST00000532909 K7ERJ3 54 aa12.57□□□□□ -0.4
CHID1-220ENST00000532909 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
CHID1-220ENST00000532909 RPL28P46779 137 aaKnown RBP12.56□□□□□ -0.4
CHID1-220ENST00000532909 Q6ZSA8 131 aa12.56□□□□□ -0.4
CHID1-220ENST00000532909 FAM30AQ9NZY2 134 aa12.56□□□□□ -0.4
CHID1-220ENST00000532909 C9orf118A6NHY6 69 aa12.55□□□□□ -0.4
CHID1-220ENST00000532909 VAMP3Q15836 100 aa12.55□□□□□ -0.4
CHID1-220ENST00000532909 C7orf33Q8WU49 177 aa12.55□□□□□ -0.4
CHID1-220ENST00000532909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.55□□□□□ -0.4
CHID1-220ENST00000532909 TRAV23DV6A0A075B6W5 121 aa12.54□□□□□ -0.4
CHID1-220ENST00000532909 A0A087WYN8 130 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms