RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
UBXN1-213ENST00000532904 SERP2Q8N6R1 65 aa12.23□□□□□ -0.45
UBXN1-213ENST00000532904 TRRAPQ9Y4A5 3859 aa12.22□□□□□ -0.45
UBXN1-213ENST00000532904 USP17L23D6RBM5 183 aa12.22□□□□□ -0.45
UBXN1-213ENST00000532904 SPART-AS1P0CW21 52 aa12.22□□□□□ -0.45
UBXN1-213ENST00000532904 KRTAP10-11P60412 298 aa12.22□□□□□ -0.45
UBXN1-213ENST00000532904 REG3AQ06141 175 aa12.22□□□□□ -0.45
UBXN1-213ENST00000532904 C9orf116Q5BN46 136 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-213ENST00000532904 hADV29S1A0JD25 119 aa12.21□□□□□ -0.45
UBXN1-213ENST00000532904 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.45
UBXN1-213ENST00000532904 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.45
UBXN1-213ENST00000532904 Q8NDZ9 215 aa12.21□□□□□ -0.45
UBXN1-213ENST00000532904 IGLV10-54A0A075B6I4 117 aa12.2□□□□□ -0.46
UBXN1-213ENST00000532904 DEFB4AO15263 64 aa12.2□□□□□ -0.46
UBXN1-213ENST00000532904 C6orf99Q4VX62 202 aa12.2□□□□□ -0.46
UBXN1-213ENST00000532904 Q8N3U1 123 aa12.2□□□□□ -0.46
UBXN1-213ENST00000532904 UPK3BQ9BT76 320 aa12.19□□□□□ -0.46
UBXN1-213ENST00000532904 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
UBXN1-213ENST00000532904 LINC00575Q6W349 94 aa12.18□□□□□ -0.46
UBXN1-213ENST00000532904 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
UBXN1-213ENST00000532904 NBEAL2Q6ZNJ1 2754 aa12.18□□□□□ -0.46
UBXN1-213ENST00000532904 MUC7Q8TAX7 377 aa12.17□□□□□ -0.46
UBXN1-213ENST00000532904 CYSTM1Q9H1C7 97 aa12.17□□□□□ -0.46
UBXN1-213ENST00000532904 CYSRT1A8MQ03 144 aa12.15□□□□□ -0.46
UBXN1-213ENST00000532904 J3KT08 172 aa12.15□□□□□ -0.46
UBXN1-213ENST00000532904 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
UBXN1-213ENST00000532904 UNQ6190/PRO20217Q6UXQ8 127 aa12.14□□□□□ -0.47
UBXN1-213ENST00000532904 TRBV10-3A0A0K0K1G6 114 aa12.13□□□□□ -0.47
UBXN1-213ENST00000532904 SPAG11BQ08648 103 aa12.13□□□□□ -0.47
UBXN1-213ENST00000532904 A0A0J9YWU9 116 aa12.12□□□□□ -0.47
UBXN1-213ENST00000532904 RPS28P62857 69 aaKnown RBP12.12□□□□□ -0.47
UBXN1-213ENST00000532904 C6orf223Q8N319 242 aa12.12□□□□□ -0.47
UBXN1-213ENST00000532904 UBL5Q9BZL1 73 aa12.12□□□□□ -0.47
UBXN1-213ENST00000532904 LOC107984640A0A0U1RRK4 108 aa12.12□□□□□ -0.47
UBXN1-213ENST00000532904 ZNF561-AS1K7EIQ3 104 aa12.12□□□□□ -0.47
UBXN1-213ENST00000532904 TMEM258P61165 79 aa12.12□□□□□ -0.47
UBXN1-213ENST00000532904 Q6ZQT0 140 aa12.12□□□□□ -0.47
UBXN1-213ENST00000532904 FBN1P35555 2871 aaKnown RBP12.11□□□□□ -0.47
UBXN1-213ENST00000532904 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
UBXN1-213ENST00000532904 LOC110117498A0A087WWA1 95 aa12.11□□□□□ -0.47
UBXN1-213ENST00000532904 IGLV6-57P01721 117 aa12.11□□□□□ -0.47
UBXN1-213ENST00000532904 RBM3P98179 157 aaKnown RBP12.1□□□□□ -0.47
UBXN1-213ENST00000532904 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
UBXN1-213ENST00000532904 FAM19A1Q7Z5A9 133 aa12.1□□□□□ -0.47
UBXN1-213ENST00000532904 LELP1Q5T871 98 aa12.09□□□□□ -0.47
UBXN1-213ENST00000532904 GHRHP01286 108 aa12.08□□□□□ -0.48
UBXN1-213ENST00000532904 CMYA5Q8N3K9 4069 aa12.08□□□□□ -0.48
UBXN1-213ENST00000532904 PRR34Q9NV39 138 aa12.07□□□□□ -0.48
UBXN1-213ENST00000532904 GVQW2A0A096LPI5 108 aaPredicted RBP12.07□□□□□ -0.48
UBXN1-213ENST00000532904 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
UBXN1-213ENST00000532904 H3BNG1 76 aa12.06□□□□□ -0.48
UBXN1-213ENST00000532904 H3BQ85 93 aa12.06□□□□□ -0.48
UBXN1-213ENST00000532904 LAMTOR3Q9UHA4 124 aa12.06□□□□□ -0.48
UBXN1-213ENST00000532904 HTN3P15516 51 aa12.05□□□□□ -0.48
UBXN1-213ENST00000532904 RETNQ9HD89 108 aa12.04□□□□□ -0.48
UBXN1-213ENST00000532904 MAST4O15021 2626 aa12.04□□□□□ -0.48
UBXN1-213ENST00000532904 DPH3Q96FX2 82 aa12.04□□□□□ -0.48
UBXN1-213ENST00000532904 KLK12Q9UKR0 248 aa12.04□□□□□ -0.48
UBXN1-213ENST00000532904 Q6ZQY7 126 aa12.02□□□□□ -0.48
UBXN1-213ENST00000532904 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.48
UBXN1-213ENST00000532904 DNAH3Q8TD57 4116 aa12.02□□□□□ -0.48
UBXN1-213ENST00000532904 M0R2N4 97 aa12.02□□□□□ -0.49
UBXN1-213ENST00000532904 PDE6GP18545 87 aa12.02□□□□□ -0.49
UBXN1-213ENST00000532904 DSCR8Q96T75 97 aa12.01□□□□□ -0.49
UBXN1-213ENST00000532904 C6orf48Q9UBA6 75 aa12.01□□□□□ -0.49
UBXN1-213ENST00000532904 BCE1O60756 84 aa12□□□□□ -0.49
UBXN1-213ENST00000532904 DIRC1Q969H9 104 aa12□□□□□ -0.49
UBXN1-213ENST00000532904 PKD1L1Q8TDX9 2849 aa11.99□□□□□ -0.49
UBXN1-213ENST00000532904 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
UBXN1-213ENST00000532904 Q6ZVQ6 151 aa11.99□□□□□ -0.49
UBXN1-213ENST00000532904 NDUFC2-KCTD14E9PQ53 114 aa11.98□□□□□ -0.49
UBXN1-213ENST00000532904 COL6A5A8TX70 2615 aa11.98□□□□□ -0.49
UBXN1-213ENST00000532904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.97□□□□□ -0.49
UBXN1-213ENST00000532904 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
UBXN1-213ENST00000532904 ZNF73O43830 326 aaPredicted RBP11.96□□□□□ -0.5
UBXN1-213ENST00000532904 Q6ZTC4 211 aa11.96□□□□□ -0.5
UBXN1-213ENST00000532904 COX7BP24311 80 aa11.95□□□□□ -0.5
UBXN1-213ENST00000532904 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
UBXN1-213ENST00000532904 TRBV7-6A0A0J9YX20 115 aa11.95□□□□□ -0.5
UBXN1-213ENST00000532904 HAMPP81172 84 aa11.95□□□□□ -0.5
UBXN1-213ENST00000532904 TRAV7A0A075B6U4 112 aa11.94□□□□□ -0.5
UBXN1-213ENST00000532904 ELOF1P60002 83 aaKnown RBP11.94□□□□□ -0.5
UBXN1-213ENST00000532904 CXCL6P80162 114 aa11.94□□□□□ -0.5
UBXN1-213ENST00000532904 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
UBXN1-213ENST00000532904 OXTP01178 125 aa11.93□□□□□ -0.5
UBXN1-213ENST00000532904 C20orf197Q8N268 126 aa11.93□□□□□ -0.5
UBXN1-213ENST00000532904 VPREB1P12018 145 aa11.92□□□□□ -0.5
UBXN1-213ENST00000532904 C11orf45Q8TAV5 145 aa11.92□□□□□ -0.5
UBXN1-213ENST00000532904 TM2D3Q9BRN9 247 aa11.91□□□□□ -0.5
UBXN1-213ENST00000532904 ANK2Q01484 3957 aa11.9□□□□□ -0.5
UBXN1-213ENST00000532904 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
UBXN1-213ENST00000532904 CAMK2N2Q96S95 79 aa11.89□□□□□ -0.51
UBXN1-213ENST00000532904 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
UBXN1-213ENST00000532904 K7EIL1 84 aa11.88□□□□□ -0.51
UBXN1-213ENST00000532904 M0R378 163 aa11.88□□□□□ -0.51
UBXN1-213ENST00000532904 TRAV10A0A0B4J240 114 aa11.88□□□□□ -0.51
UBXN1-213ENST00000532904 HIGD2BQ4VC39 106 aa11.88□□□□□ -0.51
UBXN1-213ENST00000532904 C5orf47Q569G3 176 aa11.86□□□□□ -0.51
UBXN1-213ENST00000532904 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
UBXN1-213ENST00000532904 TENM3Q9P273 2699 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms