RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	SND1-IT1	Q9HBX3	110 aa		10.61	□□□□□ -0.71
CTSB-223	ENST00000532370	TP73-AS1	Q9UF72	201 aa		10.61	□□□□□ -0.71
CTSB-223	ENST00000532370	GAGE10	A6NGK3	116 aa		10.6	□□□□□ -0.71
CTSB-223	ENST00000532370	DPM2	O94777	84 aa		10.6	□□□□□ -0.71
CTSB-223	ENST00000532370	SNRPE	P62304	92 aa	Known RBP	10.6	□□□□□ -0.71
CTSB-223	ENST00000532370	REG3G	Q6UW15	175 aa		10.6	□□□□□ -0.71
CTSB-223	ENST00000532370	PLA2G2D	Q9UNK4	145 aa		10.6	□□□□□ -0.71
CTSB-223	ENST00000532370	RPL37AP8	A6NKH3	93 aa		10.59	□□□□□ -0.71
CTSB-223	ENST00000532370	S100A2	P29034	98 aa		10.59	□□□□□ -0.71
CTSB-223	ENST00000532370	LINC00167	Q96N53	147 aa		10.59	□□□□□ -0.71
CTSB-223	ENST00000532370		A0A0U1RRA0	63 aa		10.58	□□□□□ -0.72
CTSB-223	ENST00000532370	IGKC	P01834	107 aa		10.58	□□□□□ -0.72
CTSB-223	ENST00000532370	KRTDAP	P60985	99 aa		10.58	□□□□□ -0.72
CTSB-223	ENST00000532370	COX17	Q14061	63 aa		10.58	□□□□□ -0.72
CTSB-223	ENST00000532370	SFTA2	Q6UW10	78 aa		10.58	□□□□□ -0.72
CTSB-223	ENST00000532370	IGLV5-37	A0A075B6J1	123 aa		10.57	□□□□□ -0.72
CTSB-223	ENST00000532370	LINC00158	P58513	81 aa		10.57	□□□□□ -0.72
CTSB-223	ENST00000532370	TSPEAR-AS2	P59090	65 aa		10.57	□□□□□ -0.72
CTSB-223	ENST00000532370		Q8NDZ9	215 aa		10.57	□□□□□ -0.72
CTSB-223	ENST00000532370	NKAPP1	Q8N9T2	125 aa		10.56	□□□□□ -0.72
CTSB-223	ENST00000532370	DIRC1	Q969H9	104 aa		10.56	□□□□□ -0.72
CTSB-223	ENST00000532370	VPREB1	P12018	145 aa		10.55	□□□□□ -0.72
CTSB-223	ENST00000532370	KRTAP10-8	P60410	259 aa		10.55	□□□□□ -0.72
CTSB-223	ENST00000532370	NDUFA12	Q9UI09	145 aa		10.55	□□□□□ -0.72
CTSB-223	ENST00000532370		H0Y9J4	135 aa		10.54	□□□□□ -0.72
CTSB-223	ENST00000532370	SMIM13	P0DJ93	91 aa		10.54	□□□□□ -0.72
CTSB-223	ENST00000532370	C20orf202	A1L168	122 aa		10.53	□□□□□ -0.72
CTSB-223	ENST00000532370	LEPROT	O15243	131 aa		10.52	□□□□□ -0.73
CTSB-223	ENST00000532370	AKR1D1	P51857	326 aa		10.52	□□□□□ -0.73
CTSB-223	ENST00000532370	MEIG1	Q5JSS6	88 aa		10.52	□□□□□ -0.73
CTSB-223	ENST00000532370	IGKV2-28	A0A075B6P5	120 aa		10.51	□□□□□ -0.73
CTSB-223	ENST00000532370	ZNF861P	O60384	105 aa		10.51	□□□□□ -0.73
CTSB-223	ENST00000532370	BCE1	O60756	84 aa		10.51	□□□□□ -0.73
CTSB-223	ENST00000532370	IGKV2D-28	P01615	120 aa		10.51	□□□□□ -0.73
CTSB-223	ENST00000532370	HERVK_113	P61574	105 aa		10.51	□□□□□ -0.73
CTSB-223	ENST00000532370	HERV-K104	P63124	156 aa		10.51	□□□□□ -0.73
CTSB-223	ENST00000532370	MYMX	A0A1B0GTQ4	84 aa		10.5	□□□□□ -0.73
CTSB-223	ENST00000532370		J3QQQ9	107 aa		10.5	□□□□□ -0.73
CTSB-223	ENST00000532370	RPL24	P83731	157 aa	Known RBP	10.5	□□□□□ -0.73
CTSB-223	ENST00000532370	MIR7-3HG	Q8N6C7	128 aa		10.5	□□□□□ -0.73
CTSB-223	ENST00000532370	PLEKHB2	Q96CS7	222 aa		10.5	□□□□□ -0.73
CTSB-223	ENST00000532370	IGLV1-50	A0A075B6I6	118 aa		10.48	□□□□□ -0.73
CTSB-223	ENST00000532370		E9PLD3	99 aa		10.48	□□□□□ -0.73
CTSB-223	ENST00000532370	KRTAP1-4	P0C5Y4	121 aa		10.48	□□□□□ -0.73
CTSB-223	ENST00000532370	PRR26	Q8N8Z3	221 aa		10.48	□□□□□ -0.73
CTSB-223	ENST00000532370	TMA7	Q9Y2S6	64 aa	Known RBP	10.48	□□□□□ -0.73
CTSB-223	ENST00000532370	TMEM238	C9JI98	176 aa		10.46	□□□□□ -0.73
CTSB-223	ENST00000532370	LGALS3	P17931	250 aa	Known RBP	10.46	□□□□□ -0.73
CTSB-223	ENST00000532370	BOD1L2	Q8IYS8	172 aa		10.46	□□□□□ -0.73
CTSB-223	ENST00000532370	DAND5	Q8N907	189 aa		10.46	□□□□□ -0.73
CTSB-223	ENST00000532370	RPL28	P46779	137 aa	Known RBP	10.45	□□□□□ -0.74
CTSB-223	ENST00000532370	LINC00587	B1AMM8	73 aa		10.44	□□□□□ -0.74
CTSB-223	ENST00000532370	NMU	P48645	174 aa		10.44	□□□□□ -0.74
CTSB-223	ENST00000532370	KRTAP13-1	Q8IUC0	172 aa		10.44	□□□□□ -0.74
CTSB-223	ENST00000532370	UBR4	Q5T4S7	5183 aa		10.43	□□□□□ -0.74
CTSB-223	ENST00000532370	TMEM126A	Q9H061	195 aa		10.43	□□□□□ -0.74
CTSB-223	ENST00000532370		M0R378	163 aa		10.42	□□□□□ -0.74
CTSB-223	ENST00000532370	NCR3	O14931	201 aa		10.42	□□□□□ -0.74
CTSB-223	ENST00000532370	UBE2A	P49459	152 aa		10.42	□□□□□ -0.74
CTSB-223	ENST00000532370	ATOH7	Q8N100	152 aa		10.42	□□□□□ -0.74
CTSB-223	ENST00000532370	IGKV2D-26	A0A0A0MRZ7	120 aa		10.41	□□□□□ -0.74
CTSB-223	ENST00000532370	PRLH	P81277	87 aa		10.4	□□□□□ -0.74
CTSB-223	ENST00000532370	ANKRD39	Q53RE8	183 aa		10.4	□□□□□ -0.74
CTSB-223	ENST00000532370		A0A0J9YXY3	114 aa		10.39	□□□□□ -0.75
CTSB-223	ENST00000532370	SCGB1D1	O95968	90 aa		10.39	□□□□□ -0.75
CTSB-223	ENST00000532370	FAM19A1	Q7Z5A9	133 aa		10.39	□□□□□ -0.75
CTSB-223	ENST00000532370	ADAMTSL4-AS1	Q5T5F5	129 aa		10.38	□□□□□ -0.75
CTSB-223	ENST00000532370	ANAPC11	Q9NYG5	84 aa		10.38	□□□□□ -0.75
CTSB-223	ENST00000532370	LOC107984156	A0A0G2JMH3	177 aa		10.37	□□□□□ -0.75
CTSB-223	ENST00000532370	EIF4EBP3	O60516	100 aa	Predicted RBP	10.37	□□□□□ -0.75
CTSB-223	ENST00000532370	JOSD1	Q15040	202 aa	Predicted RBP	10.37	□□□□□ -0.75
CTSB-223	ENST00000532370	ARL17A	Q8IVW1	177 aa		10.37	□□□□□ -0.75
CTSB-223	ENST00000532370	TTTY13	Q9BZ97	58 aa		10.36	□□□□□ -0.75
CTSB-223	ENST00000532370	LRP2	P98164	4655 aa		10.36	□□□□□ -0.75
CTSB-223	ENST00000532370	NPC2	P61916	151 aa		10.35	□□□□□ -0.75
CTSB-223	ENST00000532370	SOSTDC1	Q6X4U4	206 aa		10.35	□□□□□ -0.75
CTSB-223	ENST00000532370		A0A087X002	238 aa		10.34	□□□□□ -0.75
CTSB-223	ENST00000532370	TRBV10-3	A0A0K0K1G6	114 aa		10.34	□□□□□ -0.75
CTSB-223	ENST00000532370	HSBP1L1	C9JCN9	74 aa		10.34	□□□□□ -0.75
CTSB-223	ENST00000532370	ZNF815P	A8K554	130 aa		10.33	□□□□□ -0.76
CTSB-223	ENST00000532370	LITAF	Q99732	161 aa		10.33	□□□□□ -0.76
CTSB-223	ENST00000532370	KCNQ1DN	Q9H478	68 aa		10.33	□□□□□ -0.76
CTSB-223	ENST00000532370	MIEN1	Q9BRT3	115 aa		10.32	□□□□□ -0.76
CTSB-223	ENST00000532370	PRY	O14603	147 aa		10.31	□□□□□ -0.76
CTSB-223	ENST00000532370	TIMM17B	O60830	172 aa		10.31	□□□□□ -0.76
CTSB-223	ENST00000532370	RPL13A	P40429	203 aa	Known RBP	10.31	□□□□□ -0.76
CTSB-223	ENST00000532370	PCP2	Q8IVA1	136 aa		10.31	□□□□□ -0.76
CTSB-223	ENST00000532370	PYY3	Q5JQD4	70 aa		10.3	□□□□□ -0.76
CTSB-223	ENST00000532370	HIGD2A	Q9BW72	106 aa		10.3	□□□□□ -0.76
CTSB-223	ENST00000532370	TRBV10-2	A0A0K0K1G8	114 aa		10.29	□□□□□ -0.76
CTSB-223	ENST00000532370	CRYGA	P11844	174 aa		10.29	□□□□□ -0.76
CTSB-223	ENST00000532370	SPRR1A	P35321	89 aa		10.29	□□□□□ -0.76
CTSB-223	ENST00000532370	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.29	□□□□□ -0.76
CTSB-223	ENST00000532370	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.28	□□□□□ -0.76
CTSB-223	ENST00000532370	NDUFC2	O95298	119 aa		10.28	□□□□□ -0.76
CTSB-223	ENST00000532370	DDT	P30046	118 aa		10.28	□□□□□ -0.76
CTSB-223	ENST00000532370	KRTAP13-2	Q52LG2	175 aa		10.27	□□□□□ -0.77
CTSB-223	ENST00000532370	LINC00337	Q8N6G1	96 aa		10.27	□□□□□ -0.77
CTSB-223	ENST00000532370	LINC00308	Q8TCZ7	52 aa		10.27	□□□□□ -0.77
CTSB-223	ENST00000532370	ETDC	A0A1B0GVM5	59 aa		10.25	□□□□□ -0.77

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