RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 HERV-K104P63124 156 aa11.26□□□□□ -0.61
SCN4B-205ENST00000531550 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
SCN4B-205ENST00000531550 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
SCN4B-205ENST00000531550 TTTY13Q9BZ97 58 aa11.26□□□□□ -0.61
SCN4B-205ENST00000531550 SLC25A34Q6PIV7 304 aa11.24□□□□□ -0.61
SCN4B-205ENST00000531550 C2orf82Q6UX34 121 aa11.24□□□□□ -0.61
SCN4B-205ENST00000531550 CAMK2N2Q96S95 79 aa11.24□□□□□ -0.61
SCN4B-205ENST00000531550 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
SCN4B-205ENST00000531550 SYCNQ0VAF6 134 aa11.23□□□□□ -0.61
SCN4B-205ENST00000531550 REG3GQ6UW15 175 aa11.23□□□□□ -0.61
SCN4B-205ENST00000531550 UNQ6190/PRO20217Q6UXQ8 127 aa11.23□□□□□ -0.61
SCN4B-205ENST00000531550 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
SCN4B-205ENST00000531550 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
SCN4B-205ENST00000531550 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
SCN4B-205ENST00000531550 SPINK6Q6UWN8 80 aa11.22□□□□□ -0.61
SCN4B-205ENST00000531550 UQCR10Q9UDW1 63 aa11.22□□□□□ -0.61
SCN4B-205ENST00000531550 A0A0J9YXY3 114 aa11.21□□□□□ -0.61
SCN4B-205ENST00000531550 LINC00587B1AMM8 73 aa11.21□□□□□ -0.61
SCN4B-205ENST00000531550 PRO1933Q9H354 126 aa11.2□□□□□ -0.62
SCN4B-205ENST00000531550 C6orf48Q9UBA6 75 aa11.2□□□□□ -0.62
SCN4B-205ENST00000531550 LPAP08519 4548 aa11.2□□□□□ -0.62
SCN4B-205ENST00000531550 CARD19Q96LW7 228 aa11.19□□□□□ -0.62
SCN4B-205ENST00000531550 MIEN1Q9BRT3 115 aa11.19□□□□□ -0.62
SCN4B-205ENST00000531550 A0A096LNI7 61 aa11.18□□□□□ -0.62
SCN4B-205ENST00000531550 TSTD3H0UI37 97 aa11.18□□□□□ -0.62
SCN4B-205ENST00000531550 TIMM17BO60830 172 aa11.18□□□□□ -0.62
SCN4B-205ENST00000531550 COX17Q14061 63 aa11.18□□□□□ -0.62
SCN4B-205ENST00000531550 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
SCN4B-205ENST00000531550 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
SCN4B-205ENST00000531550 ERG28Q9UKR5 140 aa11.18□□□□□ -0.62
SCN4B-205ENST00000531550 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCN4B-205ENST00000531550 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
SCN4B-205ENST00000531550 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
SCN4B-205ENST00000531550 C9orf116Q5BN46 136 aaPredicted RBP11.15□□□□□ -0.62
SCN4B-205ENST00000531550 C2orf91Q6ZV80 131 aa11.15□□□□□ -0.62
SCN4B-205ENST00000531550 TLX1NBP0CAT3 122 aa11.14□□□□□ -0.63
SCN4B-205ENST00000531550 SMIM13P0DJ93 91 aa11.14□□□□□ -0.63
SCN4B-205ENST00000531550 LITAFQ99732 161 aa11.14□□□□□ -0.63
SCN4B-205ENST00000531550 TMEM238C9JI98 176 aa11.13□□□□□ -0.63
SCN4B-205ENST00000531550 Q6ZRP5 223 aa11.13□□□□□ -0.63
SCN4B-205ENST00000531550 SPANXB1Q9NS25 103 aaPredicted RBP11.13□□□□□ -0.63
SCN4B-205ENST00000531550 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
SCN4B-205ENST00000531550 PFN2P35080 140 aa11.12□□□□□ -0.63
SCN4B-205ENST00000531550 LINC00158P58513 81 aa11.12□□□□□ -0.63
SCN4B-205ENST00000531550 Q6ZVH6 145 aa11.12□□□□□ -0.63
SCN4B-205ENST00000531550 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
SCN4B-205ENST00000531550 SPANXCQ9NY87 97 aa11.12□□□□□ -0.63
SCN4B-205ENST00000531550 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
SCN4B-205ENST00000531550 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
SCN4B-205ENST00000531550 A0A0U1RRA0 63 aa11.1□□□□□ -0.63
SCN4B-205ENST00000531550 LOC107984640A0A0U1RRK4 108 aa11.1□□□□□ -0.63
SCN4B-205ENST00000531550 PKIGQ9Y2B9 76 aa11.1□□□□□ -0.63
SCN4B-205ENST00000531550 PTTG1IPP53801 180 aa11.09□□□□□ -0.63
SCN4B-205ENST00000531550 TAL2Q16559 108 aa11.09□□□□□ -0.63
SCN4B-205ENST00000531550 MIR7-3HGQ8N6C7 128 aa11.09□□□□□ -0.63
SCN4B-205ENST00000531550 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
SCN4B-205ENST00000531550 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
SCN4B-205ENST00000531550 IFITM1P13164 125 aa11.07□□□□□ -0.64
SCN4B-205ENST00000531550 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
SCN4B-205ENST00000531550 DDTP30046 118 aa11.06□□□□□ -0.64
SCN4B-205ENST00000531550 DAND5Q8N907 189 aa11.06□□□□□ -0.64
SCN4B-205ENST00000531550 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
SCN4B-205ENST00000531550 HIST1H4GQ99525 98 aa11.06□□□□□ -0.64
SCN4B-205ENST00000531550 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
SCN4B-205ENST00000531550 SND1-IT1Q9HBX3 110 aa11.05□□□□□ -0.64
SCN4B-205ENST00000531550 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
SCN4B-205ENST00000531550 HSD52Q0P140 79 aa11.04□□□□□ -0.64
SCN4B-205ENST00000531550 MUSTN1Q8IVN3 82 aa11.03□□□□□ -0.64
SCN4B-205ENST00000531550 CTAG1AP78358 180 aa11.02□□□□□ -0.65
SCN4B-205ENST00000531550 GAGE2BQ13066 116 aa11.02□□□□□ -0.65
SCN4B-205ENST00000531550 GAGE2EQ4V326 116 aa11.02□□□□□ -0.65
SCN4B-205ENST00000531550 SOSTDC1Q6X4U4 206 aa11.02□□□□□ -0.65
SCN4B-205ENST00000531550 GAGE2DQ9UEU5 116 aa11.02□□□□□ -0.65
SCN4B-205ENST00000531550 CEND1Q8N111 149 aa11.01□□□□□ -0.65
SCN4B-205ENST00000531550 EIF4EBP3O60516 100 aaPredicted RBP11□□□□□ -0.65
SCN4B-205ENST00000531550 KRTAP9-2Q9BYQ4 174 aa11□□□□□ -0.65
SCN4B-205ENST00000531550 XAGE1AQ9HD64 81 aa11□□□□□ -0.65
SCN4B-205ENST00000531550 NPC2P61916 151 aa10.99□□□□□ -0.65
SCN4B-205ENST00000531550 RPL24P83731 157 aaKnown RBP10.99□□□□□ -0.65
SCN4B-205ENST00000531550 C9orf129Q5T035 196 aaKnown RBP10.99□□□□□ -0.65
SCN4B-205ENST00000531550 PSORS1C2Q9UIG4 136 aa10.99□□□□□ -0.65
SCN4B-205ENST00000531550 MUC2Q02817 5179 aa10.98□□□□□ -0.65
SCN4B-205ENST00000531550 A0A1W2PNN7 141 aa10.97□□□□□ -0.65
SCN4B-205ENST00000531550 NDUFC2O95298 119 aa10.97□□□□□ -0.65
SCN4B-205ENST00000531550 PCP4L1A6NKN8 68 aa10.96□□□□□ -0.65
SCN4B-205ENST00000531550 PRR26Q8N8Z3 221 aa10.96□□□□□ -0.65
SCN4B-205ENST00000531550 A4D1N5 150 aa10.95□□□□□ -0.66
SCN4B-205ENST00000531550 M0R143 59 aa10.95□□□□□ -0.66
SCN4B-205ENST00000531550 TMEM238LA0A1B0GVL6 79 aa10.94□□□□□ -0.66
SCN4B-205ENST00000531550 A6NJY4 79 aa10.94□□□□□ -0.66
SCN4B-205ENST00000531550 FXYD2P54710 66 aa10.94□□□□□ -0.66
SCN4B-205ENST00000531550 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
SCN4B-205ENST00000531550 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
SCN4B-205ENST00000531550 VPREB1P12018 145 aa10.93□□□□□ -0.66
SCN4B-205ENST00000531550 HINT1P49773 126 aaPredicted RBP10.93□□□□□ -0.66
SCN4B-205ENST00000531550 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
SCN4B-205ENST00000531550 Q8NDZ9 215 aa10.92□□□□□ -0.66
SCN4B-205ENST00000531550 LCE2DQ5TA82 110 aaPredicted RBP10.91□□□□□ -0.66
SCN4B-205ENST00000531550 PHF5AQ7RTV0 110 aaKnown RBP10.91□□□□□ -0.66
SCN4B-205ENST00000531550 TRBV10-2A0A0K0K1G8 114 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms