RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 HERV-K104P63124 156 aa7.56□□□□□ -1.2
C11orf54-210ENST00000531516 MEIG1Q5JSS6 88 aa7.56□□□□□ -1.2
C11orf54-210ENST00000531516 MAP1LC3CQ9BXW4 147 aa7.56□□□□□ -1.2
C11orf54-210ENST00000531516 CRYGAP11844 174 aa7.55□□□□□ -1.2
C11orf54-210ENST00000531516 HERVK_113P61574 105 aa7.55□□□□□ -1.2
C11orf54-210ENST00000531516 S100A12P80511 92 aa7.55□□□□□ -1.2
C11orf54-210ENST00000531516 MYMXA0A1B0GTQ4 84 aa7.54□□□□□ -1.2
C11orf54-210ENST00000531516 KRTAP1-4P0C5Y4 121 aa7.54□□□□□ -1.2
C11orf54-210ENST00000531516 VPREB1P12018 145 aa7.54□□□□□ -1.2
C11orf54-210ENST00000531516 S100A1P23297 94 aa7.54□□□□□ -1.2
C11orf54-210ENST00000531516 PLNP26678 52 aa7.54□□□□□ -1.2
C11orf54-210ENST00000531516 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
C11orf54-210ENST00000531516 A0A0U1RRA0 63 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BKO60814 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BJP06899 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BOP23527 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BBP33778 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BDP58876 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BCP62807 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST2H2BEQ16778 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.52□□□□□ -1.21
C11orf54-210ENST00000531516 TYMSOSQ8TAI1 123 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BHQ93079 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 PLEKHB2Q96CS7 222 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BNQ99877 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 HIST1H2BMQ99879 126 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 NDUFA12Q9UI09 145 aa7.52□□□□□ -1.21
C11orf54-210ENST00000531516 TNXBP22105 4242 aa7.51□□□□□ -1.21
C11orf54-210ENST00000531516 M0R378 163 aa7.51□□□□□ -1.21
C11orf54-210ENST00000531516 TMEM126AQ9H061 195 aa7.51□□□□□ -1.21
C11orf54-210ENST00000531516 DPM2O94777 84 aa7.5□□□□□ -1.21
C11orf54-210ENST00000531516 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
C11orf54-210ENST00000531516 FABP4P15090 132 aa7.5□□□□□ -1.21
C11orf54-210ENST00000531516 BOD1L2Q8IYS8 172 aa7.5□□□□□ -1.21
C11orf54-210ENST00000531516 IGKV2D-26A0A0A0MRZ7 120 aa7.49□□□□□ -1.21
C11orf54-210ENST00000531516 FAM229BQ4G0N7 80 aa7.49□□□□□ -1.21
C11orf54-210ENST00000531516 MIEN1Q9BRT3 115 aa7.49□□□□□ -1.21
C11orf54-210ENST00000531516 LEPROTO15243 131 aa7.48□□□□□ -1.21
C11orf54-210ENST00000531516 LGALS3P17931 250 aaKnown RBP7.48□□□□□ -1.21
C11orf54-210ENST00000531516 NMUP48645 174 aa7.48□□□□□ -1.21
C11orf54-210ENST00000531516 PRLHP81277 87 aa7.48□□□□□ -1.21
C11orf54-210ENST00000531516 PRR4Q16378 134 aa7.48□□□□□ -1.21
C11orf54-210ENST00000531516 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
C11orf54-210ENST00000531516 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
C11orf54-210ENST00000531516 IGKCP01834 107 aa7.47□□□□□ -1.21
C11orf54-210ENST00000531516 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
C11orf54-210ENST00000531516 ZNF706Q9Y5V0 76 aaPredicted RBP7.47□□□□□ -1.21
C11orf54-210ENST00000531516 PRYO14603 147 aa7.46□□□□□ -1.22
C11orf54-210ENST00000531516 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
C11orf54-210ENST00000531516 J3QQQ9 107 aa7.45□□□□□ -1.22
C11orf54-210ENST00000531516 TSPAN13O95857 204 aa7.45□□□□□ -1.22
C11orf54-210ENST00000531516 A0A087X002 238 aa7.44□□□□□ -1.22
C11orf54-210ENST00000531516 ETDCA0A1B0GVM5 59 aa7.44□□□□□ -1.22
C11orf54-210ENST00000531516 NCR3O14931 201 aa7.44□□□□□ -1.22
C11orf54-210ENST00000531516 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
C11orf54-210ENST00000531516 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
C11orf54-210ENST00000531516 LINC00304Q8N9R0 145 aa7.42□□□□□ -1.22
C11orf54-210ENST00000531516 PMCHL2Q9BQD1 86 aa7.42□□□□□ -1.22
C11orf54-210ENST00000531516 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
C11orf54-210ENST00000531516 CBY1Q9Y3M2 126 aa7.42□□□□□ -1.22
C11orf54-210ENST00000531516 CTAG1AP78358 180 aa7.41□□□□□ -1.22
C11orf54-210ENST00000531516 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
C11orf54-210ENST00000531516 LINC00337Q8N6G1 96 aa7.41□□□□□ -1.22
C11orf54-210ENST00000531516 Q8NDZ9 215 aa7.41□□□□□ -1.22
C11orf54-210ENST00000531516 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
C11orf54-210ENST00000531516 TRBV10-2A0A0K0K1G8 114 aa7.4□□□□□ -1.22
C11orf54-210ENST00000531516 C4orf48Q5BLP8 95 aa7.4□□□□□ -1.22
C11orf54-210ENST00000531516 SPANXB1Q9NS25 103 aaPredicted RBP7.4□□□□□ -1.22
C11orf54-210ENST00000531516 TRBV10-3A0A0K0K1G6 114 aa7.39□□□□□ -1.23
C11orf54-210ENST00000531516 SYS1-DBNDD2H3BUS1 97 aa7.39□□□□□ -1.23
C11orf54-210ENST00000531516 DDTP30046 118 aa7.39□□□□□ -1.23
C11orf54-210ENST00000531516 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
C11orf54-210ENST00000531516 LRP2P98164 4655 aa7.39□□□□□ -1.23
C11orf54-210ENST00000531516 LOC107984156A0A0G2JMH3 177 aa7.38□□□□□ -1.23
C11orf54-210ENST00000531516 E9PLD3 99 aa7.38□□□□□ -1.23
C11orf54-210ENST00000531516 NDUFC2O95298 119 aa7.38□□□□□ -1.23
C11orf54-210ENST00000531516 SPAG11AQ6PDA7 123 aa7.38□□□□□ -1.23
C11orf54-210ENST00000531516 ARL17AQ8IVW1 177 aa7.38□□□□□ -1.23
C11orf54-210ENST00000531516 DAND5Q8N907 189 aa7.38□□□□□ -1.23
C11orf54-210ENST00000531516 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
C11orf54-210ENST00000531516 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
C11orf54-210ENST00000531516 JOSD1Q15040 202 aaPredicted RBP7.37□□□□□ -1.23
C11orf54-210ENST00000531516 KRTAP13-2Q52LG2 175 aa7.37□□□□□ -1.23
C11orf54-210ENST00000531516 PET117Q6UWS5 81 aa7.37□□□□□ -1.23
C11orf54-210ENST00000531516 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
C11orf54-210ENST00000531516 C20orf202A1L168 122 aa7.36□□□□□ -1.23
C11orf54-210ENST00000531516 SPRR1AP35321 89 aa7.36□□□□□ -1.23
C11orf54-210ENST00000531516 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
C11orf54-210ENST00000531516 SMCR5Q8TEV8 140 aa7.36□□□□□ -1.23
C11orf54-210ENST00000531516 A0A0J9YXY3 114 aa7.35□□□□□ -1.23
C11orf54-210ENST00000531516 KRTDAPP60985 99 aa7.35□□□□□ -1.23
C11orf54-210ENST00000531516 AKR1D1P51857 326 aa7.34□□□□□ -1.23
C11orf54-210ENST00000531516 TRAV23DV6A0A075B6W5 121 aa7.33□□□□□ -1.24
C11orf54-210ENST00000531516 HIST3H2BBQ8N257 126 aa7.33□□□□□ -1.24
C11orf54-210ENST00000531516 COPS9Q8WXC6 57 aa7.33□□□□□ -1.24
C11orf54-210ENST00000531516 B5MCH6 92 aa7.32□□□□□ -1.24
C11orf54-210ENST00000531516 TIMM17BO60830 172 aa7.32□□□□□ -1.24
C11orf54-210ENST00000531516 S100A6P06703 90 aa7.32□□□□□ -1.24
C11orf54-210ENST00000531516 NPC2P61916 151 aa7.32□□□□□ -1.24
C11orf54-210ENST00000531516 ZNF815PA8K554 130 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms