RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 NAV3Q8IVL0 2385 aa10.06□□□□□ -0.8
LRRK1-207ENST00000531270 AGRNO00468 2067 aa10.05□□□□□ -0.8
LRRK1-207ENST00000531270 ELOF1P60002 83 aaKnown RBP10.05□□□□□ -0.8
LRRK1-207ENST00000531270 COL4A4P53420 1690 aaPredicted RBP10.05□□□□□ -0.8
LRRK1-207ENST00000531270 FAM218AQ96MZ4 157 aa10.05□□□□□ -0.8
LRRK1-207ENST00000531270 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
LRRK1-207ENST00000531270 TRAV22A0A0B4J277 110 aa10.04□□□□□ -0.8
LRRK1-207ENST00000531270 IGLV5-39A0A0G2JS06 123 aa10.04□□□□□ -0.8
LRRK1-207ENST00000531270 C2CD3Q4AC94 2353 aa10.04□□□□□ -0.8
LRRK1-207ENST00000531270 MYO18BQ8IUG5 2567 aa10.04□□□□□ -0.8
LRRK1-207ENST00000531270 CDIP1Q9H305 208 aa10.04□□□□□ -0.8
LRRK1-207ENST00000531270 NAV2Q8IVL1 2488 aa10.03□□□□□ -0.8
LRRK1-207ENST00000531270 COX8CQ7Z4L0 72 aa10.03□□□□□ -0.8
LRRK1-207ENST00000531270 NBDYA0A0U1RRE5 68 aa10.03□□□□□ -0.8
LRRK1-207ENST00000531270 Q6ZRX8 168 aa10.02□□□□□ -0.8
LRRK1-207ENST00000531270 LINC01600Q96MT4 127 aa10.02□□□□□ -0.81
LRRK1-207ENST00000531270 EML5Q05BV3 1969 aa10□□□□□ -0.81
LRRK1-207ENST00000531270 TM2D3Q9BRN9 247 aa9.99□□□□□ -0.81
LRRK1-207ENST00000531270 Q6ZQT0 140 aa9.99□□□□□ -0.81
LRRK1-207ENST00000531270 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
LRRK1-207ENST00000531270 LINC00588Q9Y4M8 146 aa9.98□□□□□ -0.81
LRRK1-207ENST00000531270 LTBP2Q14767 1821 aa9.97□□□□□ -0.81
LRRK1-207ENST00000531270 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
LRRK1-207ENST00000531270 BCE1O60756 84 aa9.97□□□□□ -0.81
LRRK1-207ENST00000531270 KRTAP24-1Q3LI83 254 aa9.96□□□□□ -0.82
LRRK1-207ENST00000531270 CRIPTQ9P021 101 aa9.96□□□□□ -0.82
LRRK1-207ENST00000531270 IGLV6-57P01721 117 aa9.95□□□□□ -0.82
LRRK1-207ENST00000531270 H3BPC8 53 aa9.95□□□□□ -0.82
LRRK1-207ENST00000531270 DSCR10P59022 87 aa9.94□□□□□ -0.82
LRRK1-207ENST00000531270 FAM19A4Q96LR4 140 aa9.94□□□□□ -0.82
LRRK1-207ENST00000531270 TET2Q6N021 2002 aaPredicted RBP9.94□□□□□ -0.82
LRRK1-207ENST00000531270 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
LRRK1-207ENST00000531270 CEP192Q8TEP8 1941 aa9.94□□□□□ -0.82
LRRK1-207ENST00000531270 UTRNP46939 3433 aa9.92□□□□□ -0.82
LRRK1-207ENST00000531270 LOC101927531A0A1B0GV80 90 aa9.92□□□□□ -0.82
LRRK1-207ENST00000531270 TRBV7-4A0A0J9YYF1 115 aa9.92□□□□□ -0.82
LRRK1-207ENST00000531270 LINC01554Q52M75 96 aa9.92□□□□□ -0.82
LRRK1-207ENST00000531270 COA5Q86WW8 74 aa9.91□□□□□ -0.82
LRRK1-207ENST00000531270 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
LRRK1-207ENST00000531270 MRPL34Q9BQ48 92 aaKnown RBP9.91□□□□□ -0.82
LRRK1-207ENST00000531270 LOC110117498A0A087WWA1 95 aa9.9□□□□□ -0.82
LRRK1-207ENST00000531270 K7EQZ3 153 aa9.9□□□□□ -0.83
LRRK1-207ENST00000531270 H3BNG1 76 aa9.89□□□□□ -0.83
LRRK1-207ENST00000531270 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
LRRK1-207ENST00000531270 A8MWP4 228 aa9.89□□□□□ -0.83
LRRK1-207ENST00000531270 OBSCN-AS1Q96MR7 158 aa9.89□□□□□ -0.83
LRRK1-207ENST00000531270 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
LRRK1-207ENST00000531270 A0A1B0GW54 56 aa9.87□□□□□ -0.83
LRRK1-207ENST00000531270 A8MUN3 132 aa9.87□□□□□ -0.83
LRRK1-207ENST00000531270 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
LRRK1-207ENST00000531270 DNAH10OSP0CZ25 163 aa9.86□□□□□ -0.83
LRRK1-207ENST00000531270 GVQW2A0A096LPI5 108 aaPredicted RBP9.85□□□□□ -0.83
LRRK1-207ENST00000531270 UQCR11O14957 56 aa9.85□□□□□ -0.83
LRRK1-207ENST00000531270 LINC01546A6NGU7 62 aa9.84□□□□□ -0.83
LRRK1-207ENST00000531270 IGLV5-45A0A087WSX0 123 aa9.84□□□□□ -0.83
LRRK1-207ENST00000531270 Q8NAQ8 132 aa9.84□□□□□ -0.83
LRRK1-207ENST00000531270 A0A0D9SG42 100 aa9.84□□□□□ -0.83
LRRK1-207ENST00000531270 LINC00304Q8N9R0 145 aa9.84□□□□□ -0.83
LRRK1-207ENST00000531270 IGLV5-37A0A075B6J1 123 aa9.83□□□□□ -0.84
LRRK1-207ENST00000531270 MIR22HGQ0VDD5 57 aa9.82□□□□□ -0.84
LRRK1-207ENST00000531270 PTPRSQ13332 1948 aa9.82□□□□□ -0.84
LRRK1-207ENST00000531270 COL5A1P20908 1838 aaPredicted RBP9.81□□□□□ -0.84
LRRK1-207ENST00000531270 A0A0G2JQZ4 141 aa9.78□□□□□ -0.84
LRRK1-207ENST00000531270 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
LRRK1-207ENST00000531270 ANAPC11Q9NYG5 84 aa9.77□□□□□ -0.84
LRRK1-207ENST00000531270 C8orf17Q9NRJ1 99 aa9.77□□□□□ -0.85
LRRK1-207ENST00000531270 LRP4O75096 1905 aa9.76□□□□□ -0.85
LRRK1-207ENST00000531270 ADAMTS20P59510 1910 aa9.76□□□□□ -0.85
LRRK1-207ENST00000531270 IGLV1-50A0A075B6I6 118 aa9.76□□□□□ -0.85
LRRK1-207ENST00000531270 IGFL1Q6UW32 110 aa9.76□□□□□ -0.85
LRRK1-207ENST00000531270 RPS28P62857 69 aaKnown RBP9.76□□□□□ -0.85
LRRK1-207ENST00000531270 MUC22E2RYF6 1773 aaPredicted RBP9.75□□□□□ -0.85
LRRK1-207ENST00000531270 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
LRRK1-207ENST00000531270 NCOR2Q9Y618 2525 aa9.75□□□□□ -0.85
LRRK1-207ENST00000531270 RBM12B-AS1Q9P1G2 102 aa9.74□□□□□ -0.85
LRRK1-207ENST00000531270 PIEZO2Q9H5I5 2752 aa9.74□□□□□ -0.85
LRRK1-207ENST00000531270 JMJD1CQ15652 2540 aa9.73□□□□□ -0.85
LRRK1-207ENST00000531270 CPAMD8Q8IZJ3 1885 aa9.72□□□□□ -0.85
LRRK1-207ENST00000531270 IGF2RP11717 2491 aa9.71□□□□□ -0.85
LRRK1-207ENST00000531270 ZNF575Q86XF7 245 aa9.71□□□□□ -0.85
LRRK1-207ENST00000531270 A0A1B0GVX0 72 aa9.7□□□□□ -0.86
LRRK1-207ENST00000531270 CYP4F30PQ9H0H9 118 aa9.7□□□□□ -0.86
LRRK1-207ENST00000531270 IGLV5-48A0A075B6I7 105 aa9.69□□□□□ -0.86
LRRK1-207ENST00000531270 Q8N1X5 172 aa9.69□□□□□ -0.86
LRRK1-207ENST00000531270 ZNF861PO60384 105 aa9.68□□□□□ -0.86
LRRK1-207ENST00000531270 PRR15Q8IV56 129 aa9.68□□□□□ -0.86
LRRK1-207ENST00000531270 C15orf56Q8N910 161 aa9.66□□□□□ -0.86
LRRK1-207ENST00000531270 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
LRRK1-207ENST00000531270 KRTAP10-11P60412 298 aa9.66□□□□□ -0.86
LRRK1-207ENST00000531270 KCNQ1DNQ9H478 68 aa9.66□□□□□ -0.86
LRRK1-207ENST00000531270 LRRK2Q5S007 2527 aa9.65□□□□□ -0.86
LRRK1-207ENST00000531270 MYO9AB2RTY4 2548 aa9.65□□□□□ -0.86
LRRK1-207ENST00000531270 LITAFQ99732 161 aa9.64□□□□□ -0.87
LRRK1-207ENST00000531270 K7EIL1 84 aa9.64□□□□□ -0.87
LRRK1-207ENST00000531270 DNAH12Q6ZR08 3092 aa9.62□□□□□ -0.87
LRRK1-207ENST00000531270 CENPFP49454 3210 aa9.62□□□□□ -0.87
LRRK1-207ENST00000531270 TLN1Q9Y490 2541 aaKnown RBP9.62□□□□□ -0.87
LRRK1-207ENST00000531270 C10orf142B7Z368 130 aa9.62□□□□□ -0.87
LRRK1-207ENST00000531270 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
LRRK1-207ENST00000531270 A0A087WTM6 91 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms