RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 PMCHL1Q16048 86 aa9.09□□□□□ -0.95
CHMP4A-204ENST00000530996 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
CHMP4A-204ENST00000530996 A0A0U1RRA0 63 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 C11orf86A6NJI1 115 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 CTAG1AP78358 180 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 C4orf48Q5BLP8 95 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 A0A096LNJ9 63 aa9.07□□□□□ -0.96
CHMP4A-204ENST00000530996 BAGE3Q86Y29 109 aa9.07□□□□□ -0.96
CHMP4A-204ENST00000530996 SEC11CQ9BY50 192 aa9.07□□□□□ -0.96
CHMP4A-204ENST00000530996 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
CHMP4A-204ENST00000530996 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
CHMP4A-204ENST00000530996 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
CHMP4A-204ENST00000530996 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
CHMP4A-204ENST00000530996 RPS10P5Q9NQ39 176 aa9.05□□□□□ -0.96
CHMP4A-204ENST00000530996 NCR3O14931 201 aa9.04□□□□□ -0.96
CHMP4A-204ENST00000530996 LINC00614P0C842 121 aa9.04□□□□□ -0.96
CHMP4A-204ENST00000530996 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
CHMP4A-204ENST00000530996 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 DAND5Q8N907 189 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 Q8NBF4 154 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 PRYO14603 147 aa9.02□□□□□ -0.97
CHMP4A-204ENST00000530996 RHEBQ15382 184 aa9.02□□□□□ -0.97
CHMP4A-204ENST00000530996 BOD1L2Q8IYS8 172 aa9.02□□□□□ -0.97
CHMP4A-204ENST00000530996 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
CHMP4A-204ENST00000530996 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
CHMP4A-204ENST00000530996 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
CHMP4A-204ENST00000530996 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
CHMP4A-204ENST00000530996 MUC17Q685J3 4493 aa8.99□□□□□ -0.97
CHMP4A-204ENST00000530996 KRTAP9-6A0A140TA67 174 aa8.98□□□□□ -0.97
CHMP4A-204ENST00000530996 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
CHMP4A-204ENST00000530996 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
CHMP4A-204ENST00000530996 S100A12P80511 92 aa8.97□□□□□ -0.97
CHMP4A-204ENST00000530996 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
CHMP4A-204ENST00000530996 KRTAP13-3Q3SY46 172 aa8.96□□□□□ -0.98
CHMP4A-204ENST00000530996 SMCR5Q8TEV8 140 aa8.96□□□□□ -0.98
CHMP4A-204ENST00000530996 IGLV9-49A0A0B4J1Y8 123 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 SPINK1P00995 79 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 MOBPQ13875 183 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 HERV-K104P63124 156 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 IFI27L1Q96BM0 104 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 IFITM2Q01629 132 aa8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 H0Y8G0 127 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 SPRR1AP35321 89 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 ASB16-AS1Q495Z4 193 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 MAP1LC3CQ9BXW4 147 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 LINC00587B1AMM8 73 aa8.91□□□□□ -0.98
CHMP4A-204ENST00000530996 LINC00483Q53H64 154 aa8.91□□□□□ -0.98
CHMP4A-204ENST00000530996 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
CHMP4A-204ENST00000530996 MYMXA0A1B0GTQ4 84 aa8.9□□□□□ -0.98
CHMP4A-204ENST00000530996 KRTAP4-16G5E9R7 235 aaPredicted RBP8.89□□□□□ -0.99
CHMP4A-204ENST00000530996 DDTP30046 118 aa8.89□□□□□ -0.99
CHMP4A-204ENST00000530996 CHCHD1Q96BP2 118 aaKnown RBP8.89□□□□□ -0.99
CHMP4A-204ENST00000530996 APOC3P02656 99 aa8.88□□□□□ -0.99
CHMP4A-204ENST00000530996 B5MCH6 92 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 NDUFA5Q16718 116 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 C9orf153Q5TBE3 101 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 MIEN1Q9BRT3 115 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 HSBP1O75506 76 aa8.86□□□□□ -0.99
CHMP4A-204ENST00000530996 ERC2-IT1O76042 136 aa8.86□□□□□ -0.99
CHMP4A-204ENST00000530996 SLC25A20O43772 301 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 SNAPINO95295 136 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 S100A7L2Q5SY68 101 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 Q8N377 158 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 Q6ZRX8 168 aa8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 SSBP3-AS1Q7Z2R9 100 aa8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 SVBPQ8N300 66 aa8.83□□□□□ -1
CHMP4A-204ENST00000530996 Q9BRP9 147 aa8.83□□□□□ -1
CHMP4A-204ENST00000530996 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
CHMP4A-204ENST00000530996 TRBV10-2A0A0K0K1G8 114 aa8.82□□□□□ -1
CHMP4A-204ENST00000530996 LEPROTO15243 131 aa8.82□□□□□ -1
CHMP4A-204ENST00000530996 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
CHMP4A-204ENST00000530996 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
CHMP4A-204ENST00000530996 HERVK_113P61574 105 aa8.81□□□□□ -1
CHMP4A-204ENST00000530996 LGALS3P17931 250 aaKnown RBP8.8□□□□□ -1
CHMP4A-204ENST00000530996 PLNP26678 52 aa8.8□□□□□ -1
CHMP4A-204ENST00000530996 J3QQQ9 107 aa8.79□□□□□ -1
CHMP4A-204ENST00000530996 NPC2P61916 151 aa8.79□□□□□ -1
CHMP4A-204ENST00000530996 LEPROTL1O95214 131 aa8.78□□□□□ -1
CHMP4A-204ENST00000530996 XP32Q5T750 250 aa8.78□□□□□ -1
CHMP4A-204ENST00000530996 NMUP48645 174 aa8.77□□□□□ -1.01
CHMP4A-204ENST00000530996 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 DPM2O94777 84 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 PMCHL2Q9BQD1 86 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 NDUFC2O95298 119 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms