RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
CCS-206ENST00000530961 RNF213Q63HN8 5207 aa9.55□□□□□ -0.88
CCS-206ENST00000530961 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
CCS-206ENST00000530961 M0QXV9 152 aa9.54□□□□□ -0.88
CCS-206ENST00000530961 SMIM13P0DJ93 91 aa9.54□□□□□ -0.88
CCS-206ENST00000530961 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
CCS-206ENST00000530961 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
CCS-206ENST00000530961 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
CCS-206ENST00000530961 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
CCS-206ENST00000530961 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
CCS-206ENST00000530961 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.89
CCS-206ENST00000530961 ATOH7Q8N100 152 aa9.52□□□□□ -0.89
CCS-206ENST00000530961 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
CCS-206ENST00000530961 IGKV2D-26A0A0A0MRZ7 120 aa9.51□□□□□ -0.89
CCS-206ENST00000530961 RPL24P83731 157 aaKnown RBP9.51□□□□□ -0.89
CCS-206ENST00000530961 MIR7-3HGQ8N6C7 128 aa9.51□□□□□ -0.89
CCS-206ENST00000530961 HSBP1L1C9JCN9 74 aa9.5□□□□□ -0.89
CCS-206ENST00000530961 A0A0J9YXY3 114 aa9.49□□□□□ -0.89
CCS-206ENST00000530961 ZNF815PA8K554 130 aa9.49□□□□□ -0.89
CCS-206ENST00000530961 SCGB1D1O95968 90 aa9.49□□□□□ -0.89
CCS-206ENST00000530961 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
CCS-206ENST00000530961 ANKRD39Q53RE8 183 aa9.49□□□□□ -0.89
CCS-206ENST00000530961 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
CCS-206ENST00000530961 NKAPP1Q8N9T2 125 aa9.49□□□□□ -0.89
CCS-206ENST00000530961 UBE2BP63146 152 aa9.48□□□□□ -0.89
CCS-206ENST00000530961 LOC107984156A0A0G2JMH3 177 aa9.47□□□□□ -0.89
CCS-206ENST00000530961 VPREB1P12018 145 aa9.47□□□□□ -0.89
CCS-206ENST00000530961 ARL17AQ8IVW1 177 aa9.47□□□□□ -0.89
CCS-206ENST00000530961 PSORS1C2Q9UIG4 136 aa9.47□□□□□ -0.89
CCS-206ENST00000530961 TMA7Q9Y2S6 64 aaKnown RBP9.47□□□□□ -0.89
CCS-206ENST00000530961 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
CCS-206ENST00000530961 TIMM17BO60830 172 aa9.46□□□□□ -0.9
CCS-206ENST00000530961 BOD1L2Q8IYS8 172 aa9.46□□□□□ -0.9
CCS-206ENST00000530961 KRTAP9-6A0A140TA67 174 aa9.45□□□□□ -0.9
CCS-206ENST00000530961 LINC00167Q96N53 147 aa9.45□□□□□ -0.9
CCS-206ENST00000530961 C1orf137Q5JT78 98 aa9.44□□□□□ -0.9
CCS-206ENST00000530961 DAND5Q8N907 189 aa9.44□□□□□ -0.9
CCS-206ENST00000530961 MIEN1Q9BRT3 115 aa9.44□□□□□ -0.9
CCS-206ENST00000530961 TTTY13Q9BZ97 58 aa9.44□□□□□ -0.9
CCS-206ENST00000530961 ADAMTSL4-AS1Q5T5F5 129 aa9.43□□□□□ -0.9
CCS-206ENST00000530961 SCGB1D4Q6XE38 83 aa9.43□□□□□ -0.9
CCS-206ENST00000530961 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
CCS-206ENST00000530961 KRTAP9-2Q9BYQ4 174 aa9.43□□□□□ -0.9
CCS-206ENST00000530961 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
CCS-206ENST00000530961 KRTAP29-1A8MX34 341 aaPredicted RBP9.42□□□□□ -0.9
CCS-206ENST00000530961 JOSD1Q15040 202 aaPredicted RBP9.42□□□□□ -0.9
CCS-206ENST00000530961 PCP2Q8IVA1 136 aa9.42□□□□□ -0.9
CCS-206ENST00000530961 Q8NDZ9 215 aa9.42□□□□□ -0.9
CCS-206ENST00000530961 LITAFQ99732 161 aa9.42□□□□□ -0.9
CCS-206ENST00000530961 RPL37AP8A6NKH3 93 aa9.41□□□□□ -0.9
CCS-206ENST00000530961 M0R378 163 aa9.41□□□□□ -0.9
CCS-206ENST00000530961 TMEM238C9JI98 176 aa9.4□□□□□ -0.9
CCS-206ENST00000530961 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
CCS-206ENST00000530961 SRSF9Q13242 221 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCS-206ENST00000530961 SPINK6Q6UWN8 80 aa9.4□□□□□ -0.9
CCS-206ENST00000530961 IGLV1-50A0A075B6I6 118 aa9.39□□□□□ -0.91
CCS-206ENST00000530961 NDUFC2O95298 119 aa9.39□□□□□ -0.91
CCS-206ENST00000530961 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
CCS-206ENST00000530961 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
CCS-206ENST00000530961 Q6ZVH6 145 aa9.38□□□□□ -0.91
CCS-206ENST00000530961 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
CCS-206ENST00000530961 IGKV2-28A0A075B6P5 120 aa9.37□□□□□ -0.91
CCS-206ENST00000530961 IGKV2D-28P01615 120 aa9.37□□□□□ -0.91
CCS-206ENST00000530961 SOSTDC1Q6X4U4 206 aa9.37□□□□□ -0.91
CCS-206ENST00000530961 COPS9Q8WXC6 57 aa9.37□□□□□ -0.91
CCS-206ENST00000530961 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
CCS-206ENST00000530961 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
CCS-206ENST00000530961 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
CCS-206ENST00000530961 BCE1O60756 84 aa9.36□□□□□ -0.91
CCS-206ENST00000530961 NPC2P61916 151 aa9.36□□□□□ -0.91
CCS-206ENST00000530961 NCR3O14931 201 aa9.35□□□□□ -0.91
CCS-206ENST00000530961 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
CCS-206ENST00000530961 IFITM1P13164 125 aa9.35□□□□□ -0.91
CCS-206ENST00000530961 VAMP8Q9BV40 100 aa9.35□□□□□ -0.91
CCS-206ENST00000530961 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
CCS-206ENST00000530961 COX8AP10176 69 aa9.34□□□□□ -0.91
CCS-206ENST00000530961 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
CCS-206ENST00000530961 DLEU1O43261 78 aa9.33□□□□□ -0.92
CCS-206ENST00000530961 ZNF861PO60384 105 aa9.33□□□□□ -0.92
CCS-206ENST00000530961 S100A12P80511 92 aa9.33□□□□□ -0.92
CCS-206ENST00000530961 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
CCS-206ENST00000530961 DIRC1Q969H9 104 aa9.33□□□□□ -0.92
CCS-206ENST00000530961 TMEM126AQ9H061 195 aa9.33□□□□□ -0.92
CCS-206ENST00000530961 PAM16Q9Y3D7 125 aa9.33□□□□□ -0.92
CCS-206ENST00000530961 OXTP01178 125 aa9.32□□□□□ -0.92
CCS-206ENST00000530961 RPL28P46779 137 aaKnown RBP9.32□□□□□ -0.92
CCS-206ENST00000530961 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
CCS-206ENST00000530961 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
CCS-206ENST00000530961 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
CCS-206ENST00000530961 TRBV10-3A0A0K0K1G6 114 aa9.31□□□□□ -0.92
CCS-206ENST00000530961 PRYO14603 147 aa9.31□□□□□ -0.92
CCS-206ENST00000530961 DDTP30046 118 aa9.31□□□□□ -0.92
CCS-206ENST00000530961 S100A7L2Q5SY68 101 aa9.31□□□□□ -0.92
CCS-206ENST00000530961 UBE2AP49459 152 aa9.3□□□□□ -0.92
CCS-206ENST00000530961 CBY1Q9Y3M2 126 aa9.3□□□□□ -0.92
CCS-206ENST00000530961 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
CCS-206ENST00000530961 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
CCS-206ENST00000530961 C14orf144Q96I85 54 aa9.29□□□□□ -0.92
CCS-206ENST00000530961 H0Y9J4 135 aa9.28□□□□□ -0.92
CCS-206ENST00000530961 FAM19A1Q7Z5A9 133 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms