RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 DNAH1Q9P2D7 4330 aa5.44□□□□□ -1.54
CSDE1-214ENST00000530886 UBE2E2Q96LR5 201 aa5.44□□□□□ -1.54
CSDE1-214ENST00000530886 Q9BRP9 147 aa5.44□□□□□ -1.54
CSDE1-214ENST00000530886 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.44□□□□□ -1.547e-7■■■■■ 28.6
CSDE1-214ENST00000530886 A8MU10 97 aa5.44□□□□□ -1.54
CSDE1-214ENST00000530886 FAM30AQ9NZY2 134 aa5.44□□□□□ -1.54
CSDE1-214ENST00000530886 ITPR1Q14643 2758 aa5.43□□□□□ -1.54
CSDE1-214ENST00000530886 Q8N9P0 234 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-214ENST00000530886 SPANXA2-OT1Q8N9U9 137 aa5.43□□□□□ -1.54
CSDE1-214ENST00000530886 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-214ENST00000530886 ZNF73O43830 326 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-214ENST00000530886 APOC4P55056 127 aa5.43□□□□□ -1.54
CSDE1-214ENST00000530886 HIGD2BQ4VC39 106 aa5.43□□□□□ -1.54
CSDE1-214ENST00000530886 ACACAQ13085 2346 aa5.43□□□□□ -1.54
CSDE1-214ENST00000530886 A0A0J9YWU9 116 aa5.43□□□□□ -1.54
CSDE1-214ENST00000530886 LOC101927531A0A1B0GV80 90 aa5.43□□□□□ -1.54
CSDE1-214ENST00000530886 VPREB1P12018 145 aa5.42□□□□□ -1.54
CSDE1-214ENST00000530886 C10orf25Q5T742 122 aa5.42□□□□□ -1.54
CSDE1-214ENST00000530886 C7orf65Q6ZTY9 151 aa5.42□□□□□ -1.54
CSDE1-214ENST00000530886 SPTAN1Q13813 2472 aaKnown RBP5.42□□□□□ -1.54
CSDE1-214ENST00000530886 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
CSDE1-214ENST00000530886 LCA10Q71F78 164 aa5.41□□□□□ -1.54
CSDE1-214ENST00000530886 C16orf74Q96GX8 76 aa5.41□□□□□ -1.54
CSDE1-214ENST00000530886 GVQW2A0A096LPI5 108 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-214ENST00000530886 CHKB-CPT1BH3BT56 60 aa5.4□□□□□ -1.54
CSDE1-214ENST00000530886 FBN2P35556 2912 aa5.4□□□□□ -1.54
CSDE1-214ENST00000530886 IGLV5-48A0A075B6I7 105 aa5.4□□□□□ -1.54
CSDE1-214ENST00000530886 B9D2Q9BPU9 175 aa5.4□□□□□ -1.54
CSDE1-214ENST00000530886 PTPRZ1P23471 2315 aaPredicted RBP5.4□□□□□ -1.55
CSDE1-214ENST00000530886 GIG44P09565 113 aaPredicted RBP5.4□□□□□ -1.55
CSDE1-214ENST00000530886 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.55
CSDE1-214ENST00000530886 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.55
CSDE1-214ENST00000530886 C11orf45Q8TAV5 145 aa5.39□□□□□ -1.55
CSDE1-214ENST00000530886 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
CSDE1-214ENST00000530886 C9orf116Q5BN46 136 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-214ENST00000530886 LINC00528Q8N1L1 170 aa5.39□□□□□ -1.55
CSDE1-214ENST00000530886 KLK12Q9UKR0 248 aa5.39□□□□□ -1.55
CSDE1-214ENST00000530886 APCP25054 2843 aa5.38□□□□□ -1.55
CSDE1-214ENST00000530886 OTOGQ6ZRI0 2925 aa5.38□□□□□ -1.55
CSDE1-214ENST00000530886 C8orf87E5RJ46 101 aa5.38□□□□□ -1.55
CSDE1-214ENST00000530886 UTP20O75691 2785 aaKnown RBP5.38□□□□□ -1.55
CSDE1-214ENST00000530886 ODF3L2Q3SX64 289 aa5.38□□□□□ -1.55
CSDE1-214ENST00000530886 C18orf65Q6ZTR6 163 aa5.38□□□□□ -1.55
CSDE1-214ENST00000530886 H3BPC8 53 aa5.37□□□□□ -1.55
CSDE1-214ENST00000530886 LINC00208Q96KT6 92 aa5.37□□□□□ -1.55
CSDE1-214ENST00000530886 TRRAPQ9Y4A5 3859 aa5.37□□□□□ -1.55
CSDE1-214ENST00000530886 PRB1P04280 392 aa5.36□□□□□ -1.55
CSDE1-214ENST00000530886 SLURP1P55000 103 aa5.36□□□□□ -1.55
CSDE1-214ENST00000530886 ST20-AS1Q8NBB2 130 aa5.36□□□□□ -1.55
CSDE1-214ENST00000530886 CSNK1G2-AS1Q8NCQ2 148 aa5.36□□□□□ -1.55
CSDE1-214ENST00000530886 DSCR10P59022 87 aa5.36□□□□□ -1.55
CSDE1-214ENST00000530886 CHCHD10Q8WYQ3 142 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-214ENST00000530886 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
CSDE1-214ENST00000530886 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
CSDE1-214ENST00000530886 ANK2Q01484 3957 aa5.35□□□□□ -1.55
CSDE1-214ENST00000530886 DSCR9P59020 149 aa5.35□□□□□ -1.55
CSDE1-214ENST00000530886 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
CSDE1-214ENST00000530886 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
CSDE1-214ENST00000530886 PLAC8Q9NZF1 115 aa5.35□□□□□ -1.55
CSDE1-214ENST00000530886 C3orf84H3BNL1 204 aa5.34□□□□□ -1.55
CSDE1-214ENST00000530886 KPRPQ5T749 579 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-214ENST00000530886 HIVEP3Q5T1R4 2406 aa5.34□□□□□ -1.56
CSDE1-214ENST00000530886 UNQ6190/PRO20217Q6UXQ8 127 aa5.33□□□□□ -1.56
CSDE1-214ENST00000530886 C4orf3Q8WVX3 66 aa5.33□□□□□ -1.56
CSDE1-214ENST00000530886 MP68P56378 58 aa5.33□□□□□ -1.56
CSDE1-214ENST00000530886 TNP2Q05952 138 aa5.33□□□□□ -1.56
CSDE1-214ENST00000530886 CEP295Q9C0D2 2601 aa5.33□□□□□ -1.56
CSDE1-214ENST00000530886 SPAG11BQ08648 103 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 A0A1W2PNM2 257 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 A6NED7 52 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 CYSRT1A8MQ03 144 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 FSHBP01225 129 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 MOBPQ13875 183 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 LYSTQ99698 3801 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 CSMD3Q7Z407 3707 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 CMC4P56277 68 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-214ENST00000530886 DEFB136Q30KP8 78 aa5.32□□□□□ -1.56
CSDE1-214ENST00000530886 REG3AQ06141 175 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 PRR4Q16378 134 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 Q8NBF4 154 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 K7EQZ3 153 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 DEFB112Q30KQ8 113 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 AKAP6Q13023 2319 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 MSMBP08118 114 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 Q8N377 158 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 C9orf163Q8N9P6 203 aa5.31□□□□□ -1.56
CSDE1-214ENST00000530886 CFAP46Q8IYW2 2715 aa5.3□□□□□ -1.56
CSDE1-214ENST00000530886 NF1P21359 2839 aa5.3□□□□□ -1.56
CSDE1-214ENST00000530886 CLPSL2Q6UWE3 100 aa5.3□□□□□ -1.56
CSDE1-214ENST00000530886 LINC01558Q9Y6Z2 57 aa5.3□□□□□ -1.56
CSDE1-214ENST00000530886 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
CSDE1-214ENST00000530886 C6orf48Q9UBA6 75 aa5.29□□□□□ -1.56
CSDE1-214ENST00000530886 A0A087X002 238 aa5.29□□□□□ -1.56
CSDE1-214ENST00000530886 GYPEP15421 78 aa5.29□□□□□ -1.56
CSDE1-214ENST00000530886 ASB16-AS1Q495Z4 193 aa5.29□□□□□ -1.56
CSDE1-214ENST00000530886 C19orf73Q9NVV2 129 aa5.29□□□□□ -1.56
CSDE1-214ENST00000530886 NOTCH3Q9UM47 2321 aa5.29□□□□□ -1.56
CSDE1-214ENST00000530886 DEFB123Q8N688 67 aa5.28□□□□□ -1.56
CSDE1-214ENST00000530886 WFDC10AQ9H1F0 79 aa5.28□□□□□ -1.56
CSDE1-214ENST00000530886 TEX15Q9BXT5 2789 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms