RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 UBL5Q9BZL1 73 aa13.25□□□□□ -0.29
LTBP3-217ENST00000530785 UBE2L6O14933 153 aa13.25□□□□□ -0.29
LTBP3-217ENST00000530785 TMEM256-PLSCR3K7ERE1 68 aa13.24□□□□□ -0.29
LTBP3-217ENST00000530785 KLKP1Q107X0 134 aa13.24□□□□□ -0.29
LTBP3-217ENST00000530785 Q8N814 137 aa13.24□□□□□ -0.29
LTBP3-217ENST00000530785 ATRQ13535 2644 aa13.24□□□□□ -0.29
LTBP3-217ENST00000530785 TENM1Q9UKZ4 2725 aa13.24□□□□□ -0.29
LTBP3-217ENST00000530785 IGHV3OR16-9A0A0B4J2B5 98 aa13.22□□□□□ -0.29
LTBP3-217ENST00000530785 DEFB130BP0DP73 79 aa13.22□□□□□ -0.29
LTBP3-217ENST00000530785 DEFB130AP0DP74 79 aa13.22□□□□□ -0.29
LTBP3-217ENST00000530785 C1orf195Q5TG92 126 aa13.22□□□□□ -0.29
LTBP3-217ENST00000530785 VWFP04275 2813 aa13.21□□□□□ -0.29
LTBP3-217ENST00000530785 SMIM26A0A096LP01 95 aa13.2□□□□□ -0.3
LTBP3-217ENST00000530785 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
LTBP3-217ENST00000530785 A0A087WZ39 114 aa13.19□□□□□ -0.3
LTBP3-217ENST00000530785 FP248Q71RG6 208 aaPredicted RBP13.19□□□□□ -0.3
LTBP3-217ENST00000530785 X6R8D5 127 aa13.19□□□□□ -0.3
LTBP3-217ENST00000530785 LINC00612Q8N6U2 182 aa13.18□□□□□ -0.3
LTBP3-217ENST00000530785 TRBV6-8A0A0A6YYG3 113 aa13.18□□□□□ -0.3
LTBP3-217ENST00000530785 C9orf66Q5T8R8 295 aa13.18□□□□□ -0.3
LTBP3-217ENST00000530785 FBN1P35555 2871 aaKnown RBP13.17□□□□□ -0.3
LTBP3-217ENST00000530785 IGLV4-60A0A075B6I1 120 aa13.16□□□□□ -0.3
LTBP3-217ENST00000530785 IGKV3OR2-268A0A0C4DH90 116 aa13.15□□□□□ -0.3
LTBP3-217ENST00000530785 Q6ZQT0 140 aa13.15□□□□□ -0.3
LTBP3-217ENST00000530785 TRAV10A0A0B4J240 114 aa13.13□□□□□ -0.31
LTBP3-217ENST00000530785 LINC01547P58512 204 aaPredicted RBP13.13□□□□□ -0.31
LTBP3-217ENST00000530785 RMI2Q96E14 147 aa13.13□□□□□ -0.31
LTBP3-217ENST00000530785 LOC110117498A0A087WWA1 95 aa13.12□□□□□ -0.31
LTBP3-217ENST00000530785 GYPEP15421 78 aa13.12□□□□□ -0.31
LTBP3-217ENST00000530785 SNURFQ9Y675 71 aa13.12□□□□□ -0.31
LTBP3-217ENST00000530785 F8WEM9 126 aa13.12□□□□□ -0.31
LTBP3-217ENST00000530785 NBEAL2Q6ZNJ1 2754 aa13.11□□□□□ -0.31
LTBP3-217ENST00000530785 DEFB135Q30KP9 77 aa13.11□□□□□ -0.31
LTBP3-217ENST00000530785 C6orf226Q5I0X4 101 aa13.1□□□□□ -0.31
LTBP3-217ENST00000530785 TRRAPQ9Y4A5 3859 aa13.09□□□□□ -0.31
LTBP3-217ENST00000530785 PRR3P79522 188 aaKnown RBP13.08□□□□□ -0.31
LTBP3-217ENST00000530785 RBM3P98179 157 aaKnown RBP13.08□□□□□ -0.31
LTBP3-217ENST00000530785 DEFB4AO15263 64 aa13.08□□□□□ -0.32
LTBP3-217ENST00000530785 NDUFC1O43677 76 aa13.08□□□□□ -0.32
LTBP3-217ENST00000530785 Q6ZVQ6 151 aa13.07□□□□□ -0.32
LTBP3-217ENST00000530785 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
LTBP3-217ENST00000530785 PRO0255Q9UI72 69 aa13.07□□□□□ -0.32
LTBP3-217ENST00000530785 TRBV7-6A0A0J9YX20 115 aa13.07□□□□□ -0.32
LTBP3-217ENST00000530785 ATP5EP56381 51 aaPredicted RBP13.06□□□□□ -0.32
LTBP3-217ENST00000530785 C6orf223Q8N319 242 aa13.06□□□□□ -0.32
LTBP3-217ENST00000530785 ZNF561-AS1K7EIQ3 104 aa13.06□□□□□ -0.32
LTBP3-217ENST00000530785 M0R2N4 97 aa13.06□□□□□ -0.32
LTBP3-217ENST00000530785 CXCL6P80162 114 aa13.06□□□□□ -0.32
LTBP3-217ENST00000530785 A0A096LPF7 62 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 LYRM9A8MSI8 78 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 A0A0U1RQV1 116 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 LINC00959A0A1B0GUT2 108 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 HAMPP81172 84 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 Q8IZM0 81 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 LINC00474Q9P2X8 69 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 STAB1Q9NY15 2570 aa13.05□□□□□ -0.32
LTBP3-217ENST00000530785 APOC4P55056 127 aa13.04□□□□□ -0.32
LTBP3-217ENST00000530785 LINC00575Q6W349 94 aa13.04□□□□□ -0.32
LTBP3-217ENST00000530785 IGHV4-28A0A0C4DH34 117 aa13.03□□□□□ -0.32
LTBP3-217ENST00000530785 COL6A5A8TX70 2615 aa13.03□□□□□ -0.32
LTBP3-217ENST00000530785 TRBV7-4A0A0J9YYF1 115 aa13.03□□□□□ -0.32
LTBP3-217ENST00000530785 C6orf99Q4VX62 202 aa13.03□□□□□ -0.32
LTBP3-217ENST00000530785 KRTAP24-1Q3LI83 254 aa13.02□□□□□ -0.33
LTBP3-217ENST00000530785 BRK1Q8WUW1 75 aa13.01□□□□□ -0.33
LTBP3-217ENST00000530785 Q8N3U1 123 aa13□□□□□ -0.33
LTBP3-217ENST00000530785 A0A1B0GUV1 79 aa13□□□□□ -0.33
LTBP3-217ENST00000530785 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
LTBP3-217ENST00000530785 CELA1Q9UNI1 258 aa12.99□□□□□ -0.33
LTBP3-217ENST00000530785 MIFP14174 115 aa12.99□□□□□ -0.33
LTBP3-217ENST00000530785 CLPSL2Q6UWE3 100 aa12.99□□□□□ -0.33
LTBP3-217ENST00000530785 Q8NAQ8 132 aa12.99□□□□□ -0.33
LTBP3-217ENST00000530785 LAMTOR3Q9UHA4 124 aa12.99□□□□□ -0.33
LTBP3-217ENST00000530785 PDE6GP18545 87 aa12.98□□□□□ -0.33
LTBP3-217ENST00000530785 DAD1P61803 113 aa12.98□□□□□ -0.33
LTBP3-217ENST00000530785 COX17Q14061 63 aa12.98□□□□□ -0.33
LTBP3-217ENST00000530785 IGHV4-30-4P0DP06 118 aa12.96□□□□□ -0.34
LTBP3-217ENST00000530785 Q8NDZ9 215 aa12.95□□□□□ -0.34
LTBP3-217ENST00000530785 ERC2-IT1O76042 136 aa12.93□□□□□ -0.34
LTBP3-217ENST00000530785 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
LTBP3-217ENST00000530785 NREPQ16612 68 aa12.93□□□□□ -0.34
LTBP3-217ENST00000530785 MUC7Q8TAX7 377 aa12.91□□□□□ -0.34
LTBP3-217ENST00000530785 TMEM254Q8TBM7 123 aa12.91□□□□□ -0.34
LTBP3-217ENST00000530785 H3BQ85 93 aa12.91□□□□□ -0.34
LTBP3-217ENST00000530785 LINC00269Q8N2A0 174 aa12.91□□□□□ -0.34
LTBP3-217ENST00000530785 PKD1L1Q8TDX9 2849 aa12.91□□□□□ -0.34
LTBP3-217ENST00000530785 SPART-AS1P0CW21 52 aa12.9□□□□□ -0.34
LTBP3-217ENST00000530785 HTN3P15516 51 aa12.9□□□□□ -0.34
LTBP3-217ENST00000530785 FAM229BQ4G0N7 80 aa12.9□□□□□ -0.34
LTBP3-217ENST00000530785 ANGP03950 147 aaKnown RBP12.88□□□□□ -0.35
LTBP3-217ENST00000530785 Q6ZQY7 126 aa12.88□□□□□ -0.35
LTBP3-217ENST00000530785 SCXQ7RTU7 201 aa12.88□□□□□ -0.35
LTBP3-217ENST00000530785 BPY2O14599 106 aa12.87□□□□□ -0.35
LTBP3-217ENST00000530785 IGLV10-54A0A075B6I4 117 aa12.86□□□□□ -0.35
LTBP3-217ENST00000530785 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
LTBP3-217ENST00000530785 REG3AQ06141 175 aa12.86□□□□□ -0.35
LTBP3-217ENST00000530785 CHCHD10Q8WYQ3 142 aaPredicted RBP12.86□□□□□ -0.35
LTBP3-217ENST00000530785 PMAIP1Q13794 54 aa12.85□□□□□ -0.35
LTBP3-217ENST00000530785 OXLD1Q5BKU9 147 aa12.85□□□□□ -0.35
LTBP3-217ENST00000530785 CD164L2Q6UWJ8 174 aa12.85□□□□□ -0.35
LTBP3-217ENST00000530785 IGLV6-57P01721 117 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms