RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 PRR3P79522 188 aaKnown RBP5.44□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 BATFQ16520 125 aa5.44□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 HYDINQ4G0P3 5121 aa5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 LOC107984156A0A0G2JMH3 177 aa5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 TMEM238LA0A1B0GVL6 79 aa5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 A6NJY4 79 aa5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 FXYD2P54710 66 aa5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 BVES-AS1Q5T3Y7 98 aa5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 FAM19A5Q7Z5A7 132 aaPredicted RBP5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 ARL17AQ8IVW1 177 aa5.43□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 DNAH2Q9P225 4427 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 A0A1W2PNN7 141 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 FAM168BA1KXE4 195 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 KRTAP10-1P60331 282 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 SERTAD4-AS1Q5TG53 156 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 RAB37Q96AX2 223 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 PPDPFQ9H3Y8 114 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 SACSQ9NZJ4 4579 aa5.42□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 RYR2Q92736 4967 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 A6NDN8 102 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 PANO1I0J062 215 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 NCR3O14931 201 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 NDUFC2O95298 119 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 VPREB1P12018 145 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 Q8NDZ9 215 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 OR13C6PQ8NH95 151 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 SPACA4Q8TDM5 124 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 NHP2Q9NX24 153 aaKnown RBP5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 PLA2G2DQ9UNK4 145 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 DNAH10Q8IVF4 4471 aa5.41□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 GAGE10A6NGK3 116 aa5.4□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 M0R378 163 aa5.4□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 CFC1P0CG37 223 aa5.4□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 S100A7L2Q5SY68 101 aa5.4□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 C22orf24Q9Y442 160 aa5.4□□□□□ -1.54
NEDD8-MDP1-201ENST00000530579 DNAH17Q9UFH2 4485 aa5.4□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 IGKV2-28A0A075B6P5 120 aa5.39□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 A0A087WYN8 130 aa5.39□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 H7C2G1 150 aa5.39□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 IGKV2D-28P01615 120 aa5.39□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 LBHQ53QV2 105 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 IGLV5-37A0A075B6J1 123 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 TRBV10-2A0A0K0K1G8 114 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 K7ERJ3 54 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 M0QXV9 152 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 KRTAP7-1Q8IUC3 87 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 SNHG12Q9BXW3 62 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 PLAC8Q9NZF1 115 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 PRO1854Q9UHT4 67 aa5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 A0A0B4J2C4 111 aa5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 TRBV10-3A0A0K0K1G6 114 aa5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 RPL37AP8A6NKH3 93 aa5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 RPL13AP40429 203 aaKnown RBP5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 MRPL55Q7Z7F7 128 aaKnown RBP5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 LINC00337Q8N6G1 96 aa5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 LINC00167Q96N53 147 aa5.37□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 A0A1B0GWB2 263 aa5.36□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 UBE2BP63146 152 aa5.36□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 HAMPP81172 84 aa5.36□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 Q1RN00 199 aa5.36□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 TMEM126AQ9H061 195 aa5.36□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 IGLV6-57P01721 117 aa5.35□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 Q6ZSA8 131 aa5.35□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 SCXQ7RTU7 201 aa5.35□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 IGLV1-50A0A075B6I6 118 aa5.34□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 COL5A1-AS1Q5SY13 56 aa5.34□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 CBY1Q9Y3M2 126 aa5.34□□□□□ -1.55
NEDD8-MDP1-201ENST00000530579 TRAV23DV6A0A075B6W5 121 aa5.33□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 EPM2AB3EWF7 344 aa5.33□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 PSMB2P49721 201 aa5.33□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 SMIM11BQ8TCY0 68 aa5.33□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 FAT2Q9NYQ8 4349 aa5.33□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 FRAS1Q86XX4 4008 aa5.33□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 TSPAN13O95857 204 aa5.32□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 KCNQ1DNQ9H478 68 aa5.32□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 RYR3Q15413 4870 aa5.32□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 PRYO14603 147 aa5.31□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 TAX1BP3O14907 124 aa5.31□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 ZNF73O43830 326 aaPredicted RBP5.31□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 SCGB1C2P0DMR2 95 aa5.31□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 VAMP3Q15836 100 aa5.31□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 REG3GQ6UW15 175 aa5.31□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 NAA38Q9BRA0 125 aaKnown RBP5.31□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 DNAH11Q96DT5 4516 aa5.3□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 C9orf118A6NHY6 69 aa5.3□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 H3BUT2 72 aa5.3□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 RPL28P46779 137 aaKnown RBP5.3□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 XGP55808 180 aa5.3□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 C6orf99Q4VX62 202 aa5.3□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 KRTAP11-1Q8IUC1 163 aa5.3□□□□□ -1.56
NEDD8-MDP1-201ENST00000530579 DIRC1Q969H9 104 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms