RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 YPEL4Q96NS1 127 aa12.93□□□□□ -0.34
PACSIN3-207ENST00000530513 SND1-IT1Q9HBX3 110 aa12.93□□□□□ -0.34
PACSIN3-207ENST00000530513 ERG28Q9UKR5 140 aa12.93□□□□□ -0.34
PACSIN3-207ENST00000530513 TMEM238C9JI98 176 aa12.92□□□□□ -0.34
PACSIN3-207ENST00000530513 IGKV2D-26A0A0A0MRZ7 120 aa12.91□□□□□ -0.34
PACSIN3-207ENST00000530513 TPRXLQ17RH7 258 aa12.91□□□□□ -0.34
PACSIN3-207ENST00000530513 FAM19A1Q7Z5A9 133 aa12.91□□□□□ -0.34
PACSIN3-207ENST00000530513 CBLN2Q8IUK8 224 aa12.91□□□□□ -0.34
PACSIN3-207ENST00000530513 TMEM126AQ9H061 195 aa12.91□□□□□ -0.34
PACSIN3-207ENST00000530513 CDIP1Q9H305 208 aa12.9□□□□□ -0.34
PACSIN3-207ENST00000530513 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
PACSIN3-207ENST00000530513 IGLV7-46A0A075B6I9 117 aa12.87□□□□□ -0.35
PACSIN3-207ENST00000530513 M0R378 163 aa12.87□□□□□ -0.35
PACSIN3-207ENST00000530513 TMEM170BQ5T4T1 132 aa12.87□□□□□ -0.35
PACSIN3-207ENST00000530513 C3orf22Q8N5N4 141 aa12.86□□□□□ -0.35
PACSIN3-207ENST00000530513 COX17Q14061 63 aa12.84□□□□□ -0.35
PACSIN3-207ENST00000530513 PLEKHB2Q96CS7 222 aa12.83□□□□□ -0.36
PACSIN3-207ENST00000530513 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
PACSIN3-207ENST00000530513 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
PACSIN3-207ENST00000530513 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
PACSIN3-207ENST00000530513 CTAG1AP78358 180 aa12.8□□□□□ -0.36
PACSIN3-207ENST00000530513 HIGD2AQ9BW72 106 aa12.8□□□□□ -0.36
PACSIN3-207ENST00000530513 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
PACSIN3-207ENST00000530513 LINC00158P58513 81 aa12.78□□□□□ -0.36
PACSIN3-207ENST00000530513 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
PACSIN3-207ENST00000530513 SFTA2Q6UW10 78 aa12.77□□□□□ -0.37
PACSIN3-207ENST00000530513 IFI27L1Q96BM0 104 aa12.76□□□□□ -0.37
PACSIN3-207ENST00000530513 TRAV12-1A0A0B4J245 112 aa12.75□□□□□ -0.37
PACSIN3-207ENST00000530513 TRGC2P03986 189 aa12.75□□□□□ -0.37
PACSIN3-207ENST00000530513 SPRR4Q96PI1 79 aa12.75□□□□□ -0.37
PACSIN3-207ENST00000530513 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
PACSIN3-207ENST00000530513 COLCA2A8K830 154 aa12.73□□□□□ -0.37
PACSIN3-207ENST00000530513 SMIM13P0DJ93 91 aa12.73□□□□□ -0.37
PACSIN3-207ENST00000530513 KRTAP9-6A0A140TA67 174 aa12.71□□□□□ -0.37
PACSIN3-207ENST00000530513 SPAG11AQ6PDA7 123 aa12.71□□□□□ -0.37
PACSIN3-207ENST00000530513 FAM19A2Q8N3H0 131 aa12.71□□□□□ -0.37
PACSIN3-207ENST00000530513 NCR3O14931 201 aa12.7□□□□□ -0.38
PACSIN3-207ENST00000530513 MEIG1Q5JSS6 88 aa12.68□□□□□ -0.38
PACSIN3-207ENST00000530513 FP248Q71RG6 208 aaPredicted RBP12.68□□□□□ -0.38
PACSIN3-207ENST00000530513 BOD1L2Q8IYS8 172 aa12.68□□□□□ -0.38
PACSIN3-207ENST00000530513 MIR7-3HGQ8N6C7 128 aa12.68□□□□□ -0.38
PACSIN3-207ENST00000530513 DAND5Q8N907 189 aa12.67□□□□□ -0.38
PACSIN3-207ENST00000530513 Q8NBF4 154 aa12.67□□□□□ -0.38
PACSIN3-207ENST00000530513 ZNF706Q9Y5V0 76 aaPredicted RBP12.67□□□□□ -0.38
PACSIN3-207ENST00000530513 H0Y8G0 127 aa12.66□□□□□ -0.38
PACSIN3-207ENST00000530513 TSPEAR-AS2P59090 65 aa12.66□□□□□ -0.38
PACSIN3-207ENST00000530513 KRTAP13-3Q3SY46 172 aa12.66□□□□□ -0.38
PACSIN3-207ENST00000530513 PRYO14603 147 aa12.64□□□□□ -0.39
PACSIN3-207ENST00000530513 HSBP1O75506 76 aa12.64□□□□□ -0.39
PACSIN3-207ENST00000530513 LINC00310P59036 64 aa12.64□□□□□ -0.39
PACSIN3-207ENST00000530513 NDUFA12Q9UI09 145 aa12.64□□□□□ -0.39
PACSIN3-207ENST00000530513 ATP6V1G1O75348 118 aa12.63□□□□□ -0.39
PACSIN3-207ENST00000530513 C4orf48Q5BLP8 95 aa12.63□□□□□ -0.39
PACSIN3-207ENST00000530513 SPRR1AP35321 89 aa12.62□□□□□ -0.39
PACSIN3-207ENST00000530513 HERV-K104P63124 156 aa12.62□□□□□ -0.39
PACSIN3-207ENST00000530513 TRBV10-3A0A0K0K1G6 114 aa12.61□□□□□ -0.39
PACSIN3-207ENST00000530513 KRTAP4-16G5E9R7 235 aaPredicted RBP12.61□□□□□ -0.39
PACSIN3-207ENST00000530513 LINC00337Q8N6G1 96 aa12.61□□□□□ -0.39
PACSIN3-207ENST00000530513 KCNQ1DNQ9H478 68 aa12.61□□□□□ -0.39
PACSIN3-207ENST00000530513 SERF1AO75920 110 aa12.6□□□□□ -0.39
PACSIN3-207ENST00000530513 SMCR5Q8TEV8 140 aa12.6□□□□□ -0.39
PACSIN3-207ENST00000530513 ASB16-AS1Q495Z4 193 aa12.59□□□□□ -0.39
PACSIN3-207ENST00000530513 MYMXA0A1B0GTQ4 84 aa12.57□□□□□ -0.4
PACSIN3-207ENST00000530513 KRTAP4-1Q9BYQ7 146 aa12.57□□□□□ -0.4
PACSIN3-207ENST00000530513 ETDCA0A1B0GVM5 59 aa12.56□□□□□ -0.4
PACSIN3-207ENST00000530513 LINC00483Q53H64 154 aa12.56□□□□□ -0.4
PACSIN3-207ENST00000530513 PMCHL2Q9BQD1 86 aa12.56□□□□□ -0.4
PACSIN3-207ENST00000530513 LEPROTO15243 131 aa12.55□□□□□ -0.4
PACSIN3-207ENST00000530513 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
PACSIN3-207ENST00000530513 SPINK1P00995 79 aa12.55□□□□□ -0.4
PACSIN3-207ENST00000530513 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
PACSIN3-207ENST00000530513 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
PACSIN3-207ENST00000530513 ERC2-IT1O76042 136 aa12.52□□□□□ -0.41
PACSIN3-207ENST00000530513 MOBPQ13875 183 aa12.52□□□□□ -0.41
PACSIN3-207ENST00000530513 GAGE2AQ6NT46 116 aa12.52□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BKO60814 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BJP06899 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 FABP4P15090 132 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BOP23527 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 PLNP26678 52 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BBP33778 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BDP58876 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BCP62807 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST2H2BEQ16778 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BHQ93079 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BNQ99877 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 HIST1H2BMQ99879 126 aa12.51□□□□□ -0.41
PACSIN3-207ENST00000530513 IGLV9-49A0A0B4J1Y8 123 aa12.5□□□□□ -0.41
PACSIN3-207ENST00000530513 LOC107984156A0A0G2JMH3 177 aa12.5□□□□□ -0.41
PACSIN3-207ENST00000530513 B5MCH6 92 aa12.5□□□□□ -0.41
PACSIN3-207ENST00000530513 J3QQQ9 107 aa12.5□□□□□ -0.41
PACSIN3-207ENST00000530513 ARL17AQ8IVW1 177 aa12.5□□□□□ -0.41
PACSIN3-207ENST00000530513 DDTP30046 118 aa12.49□□□□□ -0.41
PACSIN3-207ENST00000530513 Q8N377 158 aa12.49□□□□□ -0.41
PACSIN3-207ENST00000530513 DPM2O94777 84 aa12.48□□□□□ -0.41
PACSIN3-207ENST00000530513 LINC01547P58512 204 aaPredicted RBP12.48□□□□□ -0.41
PACSIN3-207ENST00000530513 SEC61BP60468 96 aaKnown RBP12.48□□□□□ -0.41
PACSIN3-207ENST00000530513 Q9BRP9 147 aa12.48□□□□□ -0.41
PACSIN3-207ENST00000530513 TRBV10-2A0A0K0K1G8 114 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms