RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 Q6ZRU5 148 aa2.78□□□□□ -1.96
VPS26B-205ENST00000530402 TCTE3Q8IZS6 198 aa2.78□□□□□ -1.96
VPS26B-205ENST00000530402 OR5A1Q8NGJ0 315 aa2.78□□□□□ -1.96
VPS26B-205ENST00000530402 RNASE7Q9H1E1 156 aaKnown RBP2.78□□□□□ -1.96
VPS26B-205ENST00000530402 A0A0B4J2C4 111 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 IGHV1-58A0A0C4DH39 117 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 A0A1B0GUT8 65 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 SDHAF1A6NFY7 115 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 ZNF727A8MUV8 499 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 C1orf196B1AJZ1 125 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 APOMO95445 188 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 S100A8P05109 93 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 FGF6P10767 208 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 LGALS3P17931 250 aaKnown RBP2.77□□□□□ -1.97
VPS26B-205ENST00000530402 XCL1P47992 114 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 COX6A2Q02221 97 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 AKAP14Q86UN6 197 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 GATD1Q8NB37 220 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 CNFNQ9BYD5 112 aa2.77□□□□□ -1.97
VPS26B-205ENST00000530402 TRBV20OR9-2A0A075B6H5 130 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.76□□□□□ -1.97
VPS26B-205ENST00000530402 TRAV26-2A0A0B4J265 109 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 IGKV2-29A2NJV5 120 aaPredicted RBP2.76□□□□□ -1.97
VPS26B-205ENST00000530402 C7orf77A4D0Y5 90 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 HIGD1CA8MV81 97 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 F8W036 122 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 FOXA3P55318 350 aaPredicted RBP2.76□□□□□ -1.97
VPS26B-205ENST00000530402 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 ALKAL2Q6UX46 152 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 TSKUQ8WUA8 353 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 SMIM7Q9BQ49 75 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 TMEM191AQ9H0A3 160 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 RBM12B-AS1Q9P1G2 102 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 NAT8BQ9UHF3 227 aa2.76□□□□□ -1.97
VPS26B-205ENST00000530402 ABCA13Q86UQ4 5058 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
VPS26B-205ENST00000530402 TRBV6-5A0A0K0K1A5 114 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 LINC00959A0A1B0GUT2 108 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 A0A1B0GW15 77 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 LINC00862A6NCI5 91 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 COX7A2LO14548 114 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 CKS2P33552 79 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 PEA15Q15121 130 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 RPL39LQ96EH5 51 aaKnown RBP2.75□□□□□ -1.97
VPS26B-205ENST00000530402 CARD19Q96LW7 228 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 OSTCQ9NRP0 149 aa2.75□□□□□ -1.97
VPS26B-205ENST00000530402 GVQW2A0A096LPI5 108 aaPredicted RBP2.74□□□□□ -1.97
VPS26B-205ENST00000530402 TRAV13-1A0A0B4J241 112 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 TRBV27A0A0K0K1C4 114 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 LOC107984640A0A0U1RRK4 108 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 G0S2P27469 103 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 S100A2P29034 98 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 CIRBPQ14011 172 aaKnown RBP2.74□□□□□ -1.97
VPS26B-205ENST00000530402 KRTAP26-1Q6PEX3 210 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 SPINK6Q6UWN8 80 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 KRTAP13-1Q8IUC0 172 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 SPACA4Q8TDM5 124 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 IMMP2LQ96T52 175 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 SMDT1Q9H4I9 107 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 CDC42SE2Q9NRR3 84 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 PLAC8Q9NZF1 115 aa2.74□□□□□ -1.97
VPS26B-205ENST00000530402 PPBPP02775 128 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 ESDP10768 282 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 IFI27P40305 119 aaPredicted RBP2.73□□□□□ -1.97
VPS26B-205ENST00000530402 ADIRFQ15847 76 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 FAM19A1Q7Z5A9 133 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 MRPL52Q86TS9 123 aaKnown RBP2.73□□□□□ -1.97
VPS26B-205ENST00000530402 C3orf22Q8N5N4 141 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 C20orf78Q9BR46 151 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 TMEM242Q9NWH2 141 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 NAT8Q9UHE5 227 aa2.73□□□□□ -1.97
VPS26B-205ENST00000530402 TGIF2-C20orf24A0A0A6YYL0 155 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 A8MWP4 228 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 M0QXV9 152 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 MT-ND6P03923 174 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 POLR2KP53803 58 aaKnown RBP2.72□□□□□ -1.97
VPS26B-205ENST00000530402 RAB14P61106 215 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 HBBP68871 147 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 NUP35Q8NFH5 326 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 PACRGQ96M98 296 aaPredicted RBP2.72□□□□□ -1.97
VPS26B-205ENST00000530402 C2orf88Q9BSF0 95 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 SPANXA1Q9NS26 97 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 FAT1Q14517 4588 aa2.72□□□□□ -1.97
VPS26B-205ENST00000530402 A0A096LNI7 61 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 A0A1B0GXF2 115 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 A6NED7 52 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 NDUFA1O15239 70 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 SRP19P09132 144 aaKnown RBP2.71□□□□□ -1.98
VPS26B-205ENST00000530402 SPAG11BQ08648 103 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 C5orf38Q86SI9 138 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 OR10D4PQ8NGN7 298 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 LINC01600Q96MT4 127 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 TIMM21Q9BVV7 248 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 UBE2D4Q9Y2X8 147 aa2.71□□□□□ -1.98
VPS26B-205ENST00000530402 TRBV24-1A0A075B6N3 115 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 SMIM27A0A1W2PRY6 76 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 MT-ND4LP03901 98 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 KRTAP10-4P60372 401 aaPredicted RBP2.7□□□□□ -1.98
VPS26B-205ENST00000530402 CKS1BP61024 79 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 UBE2BP63146 152 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms