RNA–Protein interactions for RNA: ENST00000530330.1

SNX19-208, Transcript of sorting nexin 19, human

TSL 1 (best)

Gene SNX19, Length 880 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX19-208	ENST00000530330	LCE3C	Q5T5A8	94 aa		3.24	□□□□□ -1.89
SNX19-208	ENST00000530330	C18orf32	Q8TCD1	76 aa		3.24	□□□□□ -1.89
SNX19-208	ENST00000530330	C20orf78	Q9BR46	151 aa		3.24	□□□□□ -1.89
SNX19-208	ENST00000530330	NOP10	Q9NPE3	64 aa	Known RBP	3.24	□□□□□ -1.89
SNX19-208	ENST00000530330	TRBV6-5	A0A0K0K1A5	114 aa		3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	RTL8C	O15255	209 aa		3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	TCL1B	O95988	128 aa		3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	MGP	P08493	103 aa		3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	RPL28	P46779	137 aa	Known RBP	3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	CFAP126	Q5VTH2	177 aa		3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	IGFL1	Q6UW32	110 aa		3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	CHCHD1	Q96BP2	118 aa	Known RBP	3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	NXT2	Q9NPJ8	142 aa	Known RBP	3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	PSORS1C2	Q9UIG4	136 aa		3.23	□□□□□ -1.89
SNX19-208	ENST00000530330	TRGV2	A0A075B6R0	118 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	TRAV7	A0A075B6U4	112 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330		K7EIL1	84 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330		K7EMI3	77 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	NCR2	O95944	276 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	IGLV6-57	P01721	117 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	FXYD2	P54710	66 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	ZNF56	Q15929	161 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	KRTAP13-2	Q52LG2	175 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	LINC01554	Q52M75	96 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	DEFB121	Q5J5C9	76 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330		Q6ZTI0	123 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330		Q8N8P6	123 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	ST20	Q9HBF5	79 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	NIT2	Q9NQR4	276 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	HHLA3	Q9XRX5	114 aa		3.22	□□□□□ -1.89
SNX19-208	ENST00000530330	TENM2	Q9NT68	2774 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	IGKV2-24	A0A0C4DH68	120 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	TRBV10-1	A0A0K0K1A3	114 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	LINC01546	A6NGU7	62 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	LINC01549	A6NIU2	74 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330		H7C2G1	150 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330		M0QY20	66 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	TAX1BP3	O14907	124 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	SPART-AS1	P0CW21	52 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	POLR2K	P53803	58 aa	Known RBP	3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	IQCJ	Q1A5X6	159 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	FAM74A4	Q5TZK3	123 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	HIST1H2BL	Q99880	126 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	SMIM2	Q9BVW6	85 aa		3.21	□□□□□ -1.9
SNX19-208	ENST00000530330	COL7A1	Q02388	2944 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	TRGV4	A0A0C4DH28	118 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	TRBV27	A0A0K0K1C4	114 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	TRBV6-4	A0A1B0GX49	114 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	SDHAF1	A6NFY7	115 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	NUPR1	O60356	82 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	SMIM6	P0DI80	62 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	DEFB130B	P0DP73	79 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	DEFB130A	P0DP74	79 aa		3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	IFI27	P40305	119 aa	Predicted RBP	3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	RPL39L	Q96EH5	51 aa	Known RBP	3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	PLEC	Q15149	4684 aa	Known RBP	3.2	□□□□□ -1.9
SNX19-208	ENST00000530330	TRBV7-3	A0A075B6L6	115 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	IGHV3-64	A0A075B6Q5	118 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330		I3L3M4	83 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	HBD	P02042	147 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	PRB2	P02812	416 aa	Predicted RBP	3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	FABP4	P15090	132 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	FCER1G	P30273	86 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	RHOH	Q15669	191 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	SBSPON	Q8IVN8	264 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	PRADC1	Q9BSG0	188 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	PRO0255	Q9UI72	69 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	HSPB8	Q9UJY1	196 aa		3.19	□□□□□ -1.9
SNX19-208	ENST00000530330	IGHV1-24	A0A0C4DH33	117 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	TRBV10-2	A0A0K0K1G8	114 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330		A0A1W2PNM2	257 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	DEFB4A	O15263	64 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	LEPROTL1	O95214	131 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	HINT1	P49773	126 aa	Predicted RBP	3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	AKR1D1	P51857	326 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	UBE2D3	P61077	147 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	UBE2D2	P62837	147 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	UBE2B	P63146	152 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	FAM19A2	Q8N3H0	131 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	C2orf88	Q9BSF0	95 aa		3.18	□□□□□ -1.9
SNX19-208	ENST00000530330	NHP2	Q9NX24	153 aa	Known RBP	3.18	□□□□□ -1.9
SNX19-208	ENST00000530330		P0DMU3	169 aa		3.17	□□□□□ -1.9
SNX19-208	ENST00000530330	FAM231A	P0DMU4	169 aa		3.17	□□□□□ -1.9
SNX19-208	ENST00000530330	FAM231C	P0DMU5	169 aa		3.17	□□□□□ -1.9
SNX19-208	ENST00000530330	RPS28	P62857	69 aa	Known RBP	3.17	□□□□□ -1.9
SNX19-208	ENST00000530330	C12orf57	Q99622	126 aa		3.17	□□□□□ -1.9
SNX19-208	ENST00000530330	VPS13D	Q5THJ4	4388 aa		3.17	□□□□□ -1.9
SNX19-208	ENST00000530330	C20orf202	A1L168	122 aa		3.16	□□□□□ -1.9
SNX19-208	ENST00000530330		H3BNG1	76 aa		3.16	□□□□□ -1.9
SNX19-208	ENST00000530330	LINC00694	P0DN24	101 aa		3.16	□□□□□ -1.9
SNX19-208	ENST00000530330	LGALS3	P17931	250 aa	Known RBP	3.16	□□□□□ -1.9
SNX19-208	ENST00000530330	KRTDAP	P60985	99 aa		3.16	□□□□□ -1.9
SNX19-208	ENST00000530330	OR5A1	Q8NGJ0	315 aa		3.16	□□□□□ -1.9
SNX19-208	ENST00000530330	IFI27L1	Q96BM0	104 aa		3.16	□□□□□ -1.9
SNX19-208	ENST00000530330	TMEM141	Q96I45	108 aa		3.16	□□□□□ -1.9
SNX19-208	ENST00000530330	TRBV25-1	A0A075B6N4	114 aa		3.15	□□□□□ -1.91
SNX19-208	ENST00000530330	TRAV12-1	A0A0B4J245	112 aa		3.15	□□□□□ -1.91
SNX19-208	ENST00000530330	SYS1-DBNDD2	H3BUS1	97 aa		3.15	□□□□□ -1.91
SNX19-208	ENST00000530330	C3orf79	P0CE67	100 aa		3.15	□□□□□ -1.91
SNX19-208	ENST00000530330	HTN3	P15516	51 aa		3.15	□□□□□ -1.91

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