RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
SF3B2-208ENST00000529994 A0A087X002 238 aa6.66□□□□□ -1.34
SF3B2-208ENST00000529994 TRAV12-1A0A0B4J245 112 aa6.66□□□□□ -1.34
SF3B2-208ENST00000529994 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
SF3B2-208ENST00000529994 SERF1AO75920 110 aa6.66□□□□□ -1.34
SF3B2-208ENST00000529994 LINC00158P58513 81 aa6.66□□□□□ -1.34
SF3B2-208ENST00000529994 RETNLBQ9BQ08 111 aa6.66□□□□□ -1.34
SF3B2-208ENST00000529994 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.34
SF3B2-208ENST00000529994 IGLV5-37A0A075B6J1 123 aa6.65□□□□□ -1.34
SF3B2-208ENST00000529994 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
SF3B2-208ENST00000529994 UBE2AP49459 152 aa6.65□□□□□ -1.34
SF3B2-208ENST00000529994 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
SF3B2-208ENST00000529994 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
SF3B2-208ENST00000529994 LEPROTL1O95214 131 aa6.64□□□□□ -1.35
SF3B2-208ENST00000529994 VPREB1P12018 145 aa6.64□□□□□ -1.35
SF3B2-208ENST00000529994 FABP4P15090 132 aa6.64□□□□□ -1.35
SF3B2-208ENST00000529994 MEIG1Q5JSS6 88 aa6.64□□□□□ -1.35
SF3B2-208ENST00000529994 ATP6V1G1O75348 118 aa6.63□□□□□ -1.35
SF3B2-208ENST00000529994 LINC00310P59036 64 aa6.63□□□□□ -1.35
SF3B2-208ENST00000529994 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
SF3B2-208ENST00000529994 COX17Q14061 63 aa6.63□□□□□ -1.35
SF3B2-208ENST00000529994 SFTA2Q6UW10 78 aa6.63□□□□□ -1.35
SF3B2-208ENST00000529994 Q8NDZ9 215 aa6.63□□□□□ -1.35
SF3B2-208ENST00000529994 TYMSOSQ8TAI1 123 aa6.63□□□□□ -1.35
SF3B2-208ENST00000529994 CDIP1Q9H305 208 aa6.63□□□□□ -1.35
SF3B2-208ENST00000529994 TMEM238C9JI98 176 aa6.62□□□□□ -1.35
SF3B2-208ENST00000529994 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
SF3B2-208ENST00000529994 PRLHP81277 87 aa6.62□□□□□ -1.35
SF3B2-208ENST00000529994 FAM19A1Q7Z5A9 133 aa6.62□□□□□ -1.35
SF3B2-208ENST00000529994 PMCHL2Q9BQD1 86 aa6.62□□□□□ -1.35
SF3B2-208ENST00000529994 COLCA2A8K830 154 aa6.61□□□□□ -1.35
SF3B2-208ENST00000529994 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
SF3B2-208ENST00000529994 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
SF3B2-208ENST00000529994 NCR3O14931 201 aa6.6□□□□□ -1.35
SF3B2-208ENST00000529994 CRYGAP11844 174 aa6.6□□□□□ -1.35
SF3B2-208ENST00000529994 TMEM126AQ9H061 195 aa6.6□□□□□ -1.35
SF3B2-208ENST00000529994 HSPB8Q9UJY1 196 aa6.6□□□□□ -1.35
SF3B2-208ENST00000529994 TSPEAR-AS2P59090 65 aa6.59□□□□□ -1.35
SF3B2-208ENST00000529994 BOD1L2Q8IYS8 172 aa6.59□□□□□ -1.35
SF3B2-208ENST00000529994 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
SF3B2-208ENST00000529994 MYMXA0A1B0GTQ4 84 aa6.58□□□□□ -1.36
SF3B2-208ENST00000529994 DPM2O94777 84 aa6.58□□□□□ -1.36
SF3B2-208ENST00000529994 HERV-K104P63124 156 aa6.58□□□□□ -1.36
SF3B2-208ENST00000529994 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
SF3B2-208ENST00000529994 IGLV7-46A0A075B6I9 117 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 M0R378 163 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 LEPROTO15243 131 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 PLNP26678 52 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 HERVK_113P61574 105 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 DAND5Q8N907 189 aa6.57□□□□□ -1.36
SF3B2-208ENST00000529994 IGKCP01834 107 aa6.56□□□□□ -1.36
SF3B2-208ENST00000529994 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
SF3B2-208ENST00000529994 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
SF3B2-208ENST00000529994 PLEKHB2Q96CS7 222 aa6.56□□□□□ -1.36
SF3B2-208ENST00000529994 HIGD2AQ9BW72 106 aa6.56□□□□□ -1.36
SF3B2-208ENST00000529994 MAP1LC3CQ9BXW4 147 aa6.56□□□□□ -1.36
SF3B2-208ENST00000529994 J3QQQ9 107 aa6.55□□□□□ -1.36
SF3B2-208ENST00000529994 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
SF3B2-208ENST00000529994 LINC00587B1AMM8 73 aa6.54□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BKO60814 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BJP06899 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BOP23527 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BBP33778 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BDP58876 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 NPC2P61916 151 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BCP62807 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST2H2BEQ16778 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BHQ93079 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BNQ99877 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 HIST1H2BMQ99879 126 aa6.53□□□□□ -1.36
SF3B2-208ENST00000529994 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
SF3B2-208ENST00000529994 PRYO14603 147 aa6.52□□□□□ -1.37
SF3B2-208ENST00000529994 LINC01547P58512 204 aaPredicted RBP6.52□□□□□ -1.37
SF3B2-208ENST00000529994 MIEN1Q9BRT3 115 aa6.52□□□□□ -1.37
SF3B2-208ENST00000529994 TRBV10-3A0A0K0K1G6 114 aa6.51□□□□□ -1.37
SF3B2-208ENST00000529994 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
SF3B2-208ENST00000529994 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
SF3B2-208ENST00000529994 SYS1-DBNDD2H3BUS1 97 aa6.5□□□□□ -1.37
SF3B2-208ENST00000529994 NMUP48645 174 aa6.5□□□□□ -1.37
SF3B2-208ENST00000529994 FAM229BQ4G0N7 80 aa6.49□□□□□ -1.37
SF3B2-208ENST00000529994 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
SF3B2-208ENST00000529994 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
SF3B2-208ENST00000529994 E9PLD3 99 aa6.48□□□□□ -1.37
SF3B2-208ENST00000529994 DDTP30046 118 aa6.48□□□□□ -1.37
SF3B2-208ENST00000529994 S100A12P80511 92 aa6.48□□□□□ -1.37
SF3B2-208ENST00000529994 KRTDAPP60985 99 aa6.47□□□□□ -1.37
SF3B2-208ENST00000529994 S100A7L2Q5SY68 101 aa6.47□□□□□ -1.37
SF3B2-208ENST00000529994 SMCR5Q8TEV8 140 aa6.47□□□□□ -1.37
SF3B2-208ENST00000529994 SPRR4Q96PI1 79 aa6.47□□□□□ -1.37
SF3B2-208ENST00000529994 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
SF3B2-208ENST00000529994 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
SF3B2-208ENST00000529994 LINC01545Q5VT33 79 aa6.46□□□□□ -1.38
SF3B2-208ENST00000529994 PET117Q6UWS5 81 aa6.46□□□□□ -1.38
SF3B2-208ENST00000529994 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.38
SF3B2-208ENST00000529994 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.38
SF3B2-208ENST00000529994 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
SF3B2-208ENST00000529994 ZNF706Q9Y5V0 76 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms