RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
HIF3A-212ENST00000529205 TMEM126AQ9H061 195 aa7.7□□□□□ -1.18
HIF3A-212ENST00000529205 A0A096LNJ9 63 aa7.69□□□□□ -1.18
HIF3A-212ENST00000529205 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
HIF3A-212ENST00000529205 RPL24P83731 157 aaKnown RBP7.69□□□□□ -1.18
HIF3A-212ENST00000529205 C3orf22Q8N5N4 141 aa7.69□□□□□ -1.18
HIF3A-212ENST00000529205 TOMM6Q96B49 74 aa7.68□□□□□ -1.18
HIF3A-212ENST00000529205 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
HIF3A-212ENST00000529205 ERASQ7Z444 233 aa7.67□□□□□ -1.18
HIF3A-212ENST00000529205 SCGB3A1Q96QR1 104 aa7.67□□□□□ -1.18
HIF3A-212ENST00000529205 HIGD2AQ9BW72 106 aa7.67□□□□□ -1.18
HIF3A-212ENST00000529205 LINC01549A6NIU2 74 aa7.66□□□□□ -1.18
HIF3A-212ENST00000529205 TMEM238C9JI98 176 aa7.66□□□□□ -1.18
HIF3A-212ENST00000529205 PFN2P35080 140 aa7.66□□□□□ -1.18
HIF3A-212ENST00000529205 NDUFA12Q9UI09 145 aa7.66□□□□□ -1.18
HIF3A-212ENST00000529205 ZNF706Q9Y5V0 76 aaPredicted RBP7.66□□□□□ -1.18
HIF3A-212ENST00000529205 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
HIF3A-212ENST00000529205 H3BRM9 83 aa7.65□□□□□ -1.18
HIF3A-212ENST00000529205 M0R378 163 aa7.65□□□□□ -1.18
HIF3A-212ENST00000529205 SPINK8P0C7L1 97 aa7.65□□□□□ -1.18
HIF3A-212ENST00000529205 PMCHL1Q16048 86 aa7.65□□□□□ -1.18
HIF3A-212ENST00000529205 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
HIF3A-212ENST00000529205 SPINK1P00995 79 aa7.63□□□□□ -1.19
HIF3A-212ENST00000529205 VPREB1P12018 145 aa7.63□□□□□ -1.19
HIF3A-212ENST00000529205 COX17Q14061 63 aa7.63□□□□□ -1.19
HIF3A-212ENST00000529205 DAND5Q8N907 189 aa7.63□□□□□ -1.19
HIF3A-212ENST00000529205 LINC00614P0C842 121 aa7.62□□□□□ -1.19
HIF3A-212ENST00000529205 Q8NBF4 154 aa7.62□□□□□ -1.19
HIF3A-212ENST00000529205 SPRR4Q96PI1 79 aa7.62□□□□□ -1.19
HIF3A-212ENST00000529205 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
HIF3A-212ENST00000529205 CST9LQ9H4G1 147 aa7.61□□□□□ -1.19
HIF3A-212ENST00000529205 ERG28Q9UKR5 140 aa7.61□□□□□ -1.19
HIF3A-212ENST00000529205 SERF1AO75920 110 aa7.6□□□□□ -1.19
HIF3A-212ENST00000529205 PMVKQ15126 192 aa7.6□□□□□ -1.19
HIF3A-212ENST00000529205 FA2HQ7L5A8 372 aa7.6□□□□□ -1.19
HIF3A-212ENST00000529205 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
HIF3A-212ENST00000529205 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
HIF3A-212ENST00000529205 SFTA2Q6UW10 78 aa7.58□□□□□ -1.2
HIF3A-212ENST00000529205 CHCHD1Q96BP2 118 aaKnown RBP7.57□□□□□ -1.2
HIF3A-212ENST00000529205 COA6Q5JTJ3 125 aaKnown RBP7.56□□□□□ -1.2
HIF3A-212ENST00000529205 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
HIF3A-212ENST00000529205 ZNF625Q96I27 306 aaPredicted RBP7.56□□□□□ -1.2
HIF3A-212ENST00000529205 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
HIF3A-212ENST00000529205 HBDP02042 147 aa7.54□□□□□ -1.2
HIF3A-212ENST00000529205 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
HIF3A-212ENST00000529205 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
HIF3A-212ENST00000529205 SLC25A20O43772 301 aa7.53□□□□□ -1.2
HIF3A-212ENST00000529205 NDUFA6P56556 154 aa7.53□□□□□ -1.2
HIF3A-212ENST00000529205 LINC00158P58513 81 aa7.53□□□□□ -1.2
HIF3A-212ENST00000529205 SMCR5Q8TEV8 140 aa7.53□□□□□ -1.2
HIF3A-212ENST00000529205 PRYO14603 147 aa7.52□□□□□ -1.21
HIF3A-212ENST00000529205 IGLC3P0DOY3 106 aa7.52□□□□□ -1.21
HIF3A-212ENST00000529205 S100A12P80511 92 aa7.52□□□□□ -1.21
HIF3A-212ENST00000529205 XP32Q5T750 250 aa7.52□□□□□ -1.21
HIF3A-212ENST00000529205 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
HIF3A-212ENST00000529205 ETDCA0A1B0GVM5 59 aa7.51□□□□□ -1.21
HIF3A-212ENST00000529205 HSBP1O75506 76 aa7.51□□□□□ -1.21
HIF3A-212ENST00000529205 Q8N377 158 aa7.51□□□□□ -1.21
HIF3A-212ENST00000529205 Q8NDZ9 215 aa7.51□□□□□ -1.21
HIF3A-212ENST00000529205 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
HIF3A-212ENST00000529205 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
HIF3A-212ENST00000529205 GAGE2AQ6NT46 116 aa7.5□□□□□ -1.21
HIF3A-212ENST00000529205 FABP4P15090 132 aa7.49□□□□□ -1.21
HIF3A-212ENST00000529205 MOBPQ13875 183 aa7.49□□□□□ -1.21
HIF3A-212ENST00000529205 LINC00483Q53H64 154 aa7.49□□□□□ -1.21
HIF3A-212ENST00000529205 IFI27L1Q96BM0 104 aa7.49□□□□□ -1.21
HIF3A-212ENST00000529205 TMEM170BQ5T4T1 132 aa7.48□□□□□ -1.21
HIF3A-212ENST00000529205 A0A0U1RRA0 63 aa7.47□□□□□ -1.21
HIF3A-212ENST00000529205 SPRR1AP35321 89 aa7.47□□□□□ -1.21
HIF3A-212ENST00000529205 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
HIF3A-212ENST00000529205 HIST3H2BBQ8N257 126 aa7.47□□□□□ -1.21
HIF3A-212ENST00000529205 KCNQ1DNQ9H478 68 aa7.47□□□□□ -1.21
HIF3A-212ENST00000529205 LEPROTL1O95214 131 aa7.46□□□□□ -1.22
HIF3A-212ENST00000529205 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.22
HIF3A-212ENST00000529205 TRAV12-1A0A0B4J245 112 aa7.45□□□□□ -1.22
HIF3A-212ENST00000529205 C11orf86A6NJI1 115 aa7.45□□□□□ -1.22
HIF3A-212ENST00000529205 NCR3O14931 201 aa7.45□□□□□ -1.22
HIF3A-212ENST00000529205 MT1HP80294 61 aa7.45□□□□□ -1.22
HIF3A-212ENST00000529205 PMCHL2Q9BQD1 86 aa7.45□□□□□ -1.22
HIF3A-212ENST00000529205 C5orf52A6NGY3 159 aa7.44□□□□□ -1.22
HIF3A-212ENST00000529205 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
HIF3A-212ENST00000529205 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
HIF3A-212ENST00000529205 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
HIF3A-212ENST00000529205 LINC00587B1AMM8 73 aa7.43□□□□□ -1.22
HIF3A-212ENST00000529205 C3orf79P0CE67 100 aa7.43□□□□□ -1.22
HIF3A-212ENST00000529205 HIST1H2BLQ99880 126 aa7.43□□□□□ -1.22
HIF3A-212ENST00000529205 KRTAP4-16G5E9R7 235 aaPredicted RBP7.42□□□□□ -1.22
HIF3A-212ENST00000529205 H0Y8G0 127 aa7.42□□□□□ -1.22
HIF3A-212ENST00000529205 C9orf153Q5TBE3 101 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms