RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 POLR2KP53803 58 aaKnown RBP2.63□□□□□ -1.99
CSDE1-212ENST00000529046 Q5W150 140 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 AMMECR1LQ6DCA0 310 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 SLC51BQ86UW2 128 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 LINC00337Q8N6G1 96 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 CDC42SE2Q9NRR3 84 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 TNXBP22105 4242 aa2.63□□□□□ -1.99
CSDE1-212ENST00000529046 A0A096LNI7 61 aa2.62□□□□□ -1.99
CSDE1-212ENST00000529046 C1orf196B1AJZ1 125 aa2.62□□□□□ -1.99
CSDE1-212ENST00000529046 UBE2AP49459 152 aa2.62□□□□□ -1.99
CSDE1-212ENST00000529046 TCTE3Q8IZS6 198 aa2.62□□□□□ -1.99
CSDE1-212ENST00000529046 BTF3L4Q96K17 158 aa2.62□□□□□ -1.99
CSDE1-212ENST00000529046 TMEM191AQ9H0A3 160 aa2.62□□□□□ -1.99
CSDE1-212ENST00000529046 RBM12B-AS1Q9P1G2 102 aa2.62□□□□□ -1.99
CSDE1-212ENST00000529046 TRAV26-2A0A0B4J265 109 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 LOC107984640A0A0U1RRK4 108 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 LINC00862A6NCI5 91 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 LRP2P98164 4655 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 SYCNQ0VAF6 134 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 MOBPQ13875 183 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 SS18Q15532 418 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 ZNF664Q8N3J9 261 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 TSKUQ8WUA8 353 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 ORAOV1Q8WV07 137 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 CARD19Q96LW7 228 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 ANAPC13Q9BS18 74 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 TIMM21Q9BVV7 248 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 RNASE7Q9H1E1 156 aaKnown RBP2.61□□□□□ -1.99
CSDE1-212ENST00000529046 ST20Q9HBF5 79 aa2.61□□□□□ -1.99
CSDE1-212ENST00000529046 TRBV24-1A0A075B6N3 115 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.6□□□□□ -1.99
CSDE1-212ENST00000529046 IGKV2-24A0A0C4DH68 120 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 A0A1B0GUT8 65 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 IGKV2-29A2NJV5 120 aaPredicted RBP2.6□□□□□ -1.99
CSDE1-212ENST00000529046 C7orf77A4D0Y5 90 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 HIGD1CA8MV81 97 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 APOMO95445 188 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 TMEM241Q24JQ0 296 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 SCGB1D4Q6XE38 83 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 NUP35Q8NFH5 326 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 OR10D4PQ8NGN7 298 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 BORCS7Q96B45 105 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 RPL39LQ96EH5 51 aaKnown RBP2.6□□□□□ -1.99
CSDE1-212ENST00000529046 CAMK2N2Q96S95 79 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 C20orf78Q9BR46 151 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 OSTCQ9NRP0 149 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 PSORS1C2Q9UIG4 136 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 UBE2D4Q9Y2X8 147 aa2.6□□□□□ -1.99
CSDE1-212ENST00000529046 IGLV1-50A0A075B6I6 118 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 IGKV3OR2-268A0A0C4DH90 116 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 COX7A2LO14548 114 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 SCGB1C2P0DMR2 95 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 XCL1P47992 114 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 RAB5BP61020 215 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 IFITM2Q01629 132 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 LINC00483Q53H64 154 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 YPEL4Q96NS1 127 aa2.59□□□□□ -1.99
CSDE1-212ENST00000529046 MRPL35Q9NZE8 188 aaKnown RBP2.59□□□□□ -1.99
CSDE1-212ENST00000529046 A0A1W2PNN7 141 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.58□□□□□ -2
CSDE1-212ENST00000529046 MRPS36P82909 103 aaKnown RBP2.58□□□□□ -2
CSDE1-212ENST00000529046 C9orf116Q5BN46 136 aaPredicted RBP2.58□□□□□ -2
CSDE1-212ENST00000529046 FAM104BQ5XKR9 115 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 AMN1Q8IY45 258 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 IMMP2LQ96T52 175 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 SMDT1Q9H4I9 107 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 TMEM242Q9NWH2 141 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 NAT8BQ9UHF3 227 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 V9GYV3 84 aa2.58□□□□□ -2
CSDE1-212ENST00000529046 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 SMIM27A0A1W2PRY6 76 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 ZNF727A8MUV8 499 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 PPBPP02775 128 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 DDTP30046 118 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 FCER1GP30273 86 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 MP68P56378 58 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 BATFQ16520 125 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 DIRC1Q969H9 104 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 LINC00526Q96FQ7 95 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 SIGMAR1Q99720 223 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 SMIM7Q9BQ49 75 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 SPANXA1Q9NS26 97 aa2.57□□□□□ -2
CSDE1-212ENST00000529046 CARHSP1Q9Y2V2 147 aaKnown RBP2.57□□□□□ -2
CSDE1-212ENST00000529046 ZNF706Q9Y5V0 76 aaPredicted RBP2.57□□□□□ -2
CSDE1-212ENST00000529046 TRAV13-1A0A0B4J241 112 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 TRBV30A0A0K0K1B3 111 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 C9JQL5 133 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 NDUFA1O15239 70 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 MT-ND6P03923 174 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 IGLV7-43P04211 117 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 S100A8P05109 93 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 SRP19P09132 144 aaKnown RBP2.56□□□□□ -2
CSDE1-212ENST00000529046 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
CSDE1-212ENST00000529046 ALKAL2Q6UX46 152 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 FA2HQ7L5A8 372 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 FAM19A3Q7Z5A8 133 aa2.56□□□□□ -2
CSDE1-212ENST00000529046 EIF5A2Q9GZV4 153 aaKnown RBP2.56□□□□□ -2
CSDE1-212ENST00000529046 A0A1B0GV72 72 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 F8W036 122 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms