RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 IFI27L1Q96BM0 104 aa6.19□□□□□ -1.42
CPSF1-203ENST00000527916 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
CPSF1-203ENST00000527916 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
CPSF1-203ENST00000527916 UBE2AP49459 152 aa6.18□□□□□ -1.42
CPSF1-203ENST00000527916 IGKV2-28A0A075B6P5 120 aa6.17□□□□□ -1.42
CPSF1-203ENST00000527916 A0A087X002 238 aa6.17□□□□□ -1.42
CPSF1-203ENST00000527916 IGKV2D-28P01615 120 aa6.17□□□□□ -1.42
CPSF1-203ENST00000527916 SCO1O75880 301 aa6.16□□□□□ -1.42
CPSF1-203ENST00000527916 FAM229BQ4G0N7 80 aa6.16□□□□□ -1.42
CPSF1-203ENST00000527916 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
CPSF1-203ENST00000527916 LINC00587B1AMM8 73 aa6.15□□□□□ -1.42
CPSF1-203ENST00000527916 HSBP1O75506 76 aa6.15□□□□□ -1.42
CPSF1-203ENST00000527916 LINC00158P58513 81 aa6.15□□□□□ -1.42
CPSF1-203ENST00000527916 TMEM126AQ9H061 195 aa6.15□□□□□ -1.42
CPSF1-203ENST00000527916 M0R378 163 aa6.14□□□□□ -1.43
CPSF1-203ENST00000527916 LINC01547P58512 204 aaPredicted RBP6.14□□□□□ -1.43
CPSF1-203ENST00000527916 HERV-K104P63124 156 aa6.14□□□□□ -1.43
CPSF1-203ENST00000527916 CTAG1AP78358 180 aa6.14□□□□□ -1.43
CPSF1-203ENST00000527916 Q8NDZ9 215 aa6.14□□□□□ -1.43
CPSF1-203ENST00000527916 MUC17Q685J3 4493 aa6.14□□□□□ -1.43
CPSF1-203ENST00000527916 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
CPSF1-203ENST00000527916 TRGC2P03986 189 aa6.13□□□□□ -1.43
CPSF1-203ENST00000527916 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
CPSF1-203ENST00000527916 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
CPSF1-203ENST00000527916 CBLN2Q8IUK8 224 aa6.13□□□□□ -1.43
CPSF1-203ENST00000527916 FAM19A2Q8N3H0 131 aa6.13□□□□□ -1.43
CPSF1-203ENST00000527916 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
CPSF1-203ENST00000527916 ATP6V1G1O75348 118 aa6.12□□□□□ -1.43
CPSF1-203ENST00000527916 PRLHP81277 87 aa6.12□□□□□ -1.43
CPSF1-203ENST00000527916 KRTAP13-2Q52LG2 175 aa6.12□□□□□ -1.43
CPSF1-203ENST00000527916 PLEKHB2Q96CS7 222 aa6.12□□□□□ -1.43
CPSF1-203ENST00000527916 LEPROTL1O95214 131 aa6.11□□□□□ -1.43
CPSF1-203ENST00000527916 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
CPSF1-203ENST00000527916 RETNLBQ9BQ08 111 aa6.11□□□□□ -1.43
CPSF1-203ENST00000527916 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
CPSF1-203ENST00000527916 IGKV2D-26A0A0A0MRZ7 120 aa6.1□□□□□ -1.43
CPSF1-203ENST00000527916 A0A0U1RRA0 63 aa6.1□□□□□ -1.43
CPSF1-203ENST00000527916 MYMXA0A1B0GTQ4 84 aa6.1□□□□□ -1.43
CPSF1-203ENST00000527916 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
CPSF1-203ENST00000527916 MAP1LC3CQ9BXW4 147 aa6.1□□□□□ -1.43
CPSF1-203ENST00000527916 NDUFA12Q9UI09 145 aa6.1□□□□□ -1.43
CPSF1-203ENST00000527916 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 SERF1AO75920 110 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 PLNP26678 52 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 LINC00310P59036 64 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 BOD1L2Q8IYS8 172 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 MIR7-3HGQ8N6C7 128 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
CPSF1-203ENST00000527916 COLCA2A8K830 154 aa6.08□□□□□ -1.44
CPSF1-203ENST00000527916 PRYO14603 147 aa6.08□□□□□ -1.44
CPSF1-203ENST00000527916 LEPROTO15243 131 aa6.08□□□□□ -1.44
CPSF1-203ENST00000527916 SPRR1AP35321 89 aa6.08□□□□□ -1.44
CPSF1-203ENST00000527916 LINC00337Q8N6G1 96 aa6.08□□□□□ -1.44
CPSF1-203ENST00000527916 LINC00304Q8N9R0 145 aa6.08□□□□□ -1.44
CPSF1-203ENST00000527916 KCNQ1DNQ9H478 68 aa6.08□□□□□ -1.44
CPSF1-203ENST00000527916 H0Y8G0 127 aa6.07□□□□□ -1.44
CPSF1-203ENST00000527916 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
CPSF1-203ENST00000527916 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
CPSF1-203ENST00000527916 DPM2O94777 84 aa6.06□□□□□ -1.44
CPSF1-203ENST00000527916 NMUP48645 174 aa6.06□□□□□ -1.44
CPSF1-203ENST00000527916 SLC7A5P1Q8MH63 180 aa6.06□□□□□ -1.44
CPSF1-203ENST00000527916 SPRR4Q96PI1 79 aa6.06□□□□□ -1.44
CPSF1-203ENST00000527916 ZNF706Q9Y5V0 76 aaPredicted RBP6.06□□□□□ -1.44
CPSF1-203ENST00000527916 TRBV10-2A0A0K0K1G8 114 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 J3QQQ9 107 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 IGKCP01834 107 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 FABP4P15090 132 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 TSPEAR-AS2P59090 65 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 HERVK_113P61574 105 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 S100A12P80511 92 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 SPAG11AQ6PDA7 123 aa6.05□□□□□ -1.44
CPSF1-203ENST00000527916 NCR3O14931 201 aa6.04□□□□□ -1.44
CPSF1-203ENST00000527916 PPDPFQ9H3Y8 114 aa6.04□□□□□ -1.44
CPSF1-203ENST00000527916 TRBV10-3A0A0K0K1G6 114 aa6.03□□□□□ -1.44
CPSF1-203ENST00000527916 ETDCA0A1B0GVM5 59 aa6.03□□□□□ -1.44
CPSF1-203ENST00000527916 NDUFC2O95298 119 aa6.03□□□□□ -1.44
CPSF1-203ENST00000527916 LGALS3P17931 250 aaKnown RBP6.03□□□□□ -1.44
CPSF1-203ENST00000527916 C3orf22Q8N5N4 141 aa6.03□□□□□ -1.44
CPSF1-203ENST00000527916 SMCR5Q8TEV8 140 aa6.03□□□□□ -1.44
CPSF1-203ENST00000527916 B5MCH6 92 aa6.01□□□□□ -1.45
CPSF1-203ENST00000527916 E9PLD3 99 aa6.01□□□□□ -1.45
CPSF1-203ENST00000527916 DDTP30046 118 aa6.01□□□□□ -1.45
CPSF1-203ENST00000527916 DAND5Q8N907 189 aa6.01□□□□□ -1.45
CPSF1-203ENST00000527916 PMCHL2Q9BQD1 86 aa6.01□□□□□ -1.45
CPSF1-203ENST00000527916 MIEN1Q9BRT3 115 aa6.01□□□□□ -1.45
CPSF1-203ENST00000527916 SPANXB1Q9NS25 103 aaPredicted RBP6.01□□□□□ -1.45
CPSF1-203ENST00000527916 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
CPSF1-203ENST00000527916 LINC00483Q53H64 154 aa6□□□□□ -1.45
CPSF1-203ENST00000527916 A0A0J9YXY3 114 aa5.99□□□□□ -1.45
CPSF1-203ENST00000527916 SYS1-DBNDD2H3BUS1 97 aa5.99□□□□□ -1.45
CPSF1-203ENST00000527916 IGLV6-57P01721 117 aa5.99□□□□□ -1.45
CPSF1-203ENST00000527916 C4orf48Q5BLP8 95 aa5.99□□□□□ -1.45
CPSF1-203ENST00000527916 HIST1H2BKO60814 126 aa5.98□□□□□ -1.45
CPSF1-203ENST00000527916 HIST1H2BJP06899 126 aa5.98□□□□□ -1.45
CPSF1-203ENST00000527916 HIST1H2BOP23527 126 aa5.98□□□□□ -1.45
CPSF1-203ENST00000527916 HIST1H2BBP33778 126 aa5.98□□□□□ -1.45
CPSF1-203ENST00000527916 HIST1H2BDP58876 126 aa5.98□□□□□ -1.45
CPSF1-203ENST00000527916 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
CPSF1-203ENST00000527916 HIST1H2BCP62807 126 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms