RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 VPREB1P12018 145 aa7.33□□□□□ -1.24
SCN3B-204ENST00000527836 PRLHP81277 87 aa7.33□□□□□ -1.24
SCN3B-204ENST00000527836 IFI27L1Q96BM0 104 aa7.33□□□□□ -1.24
SCN3B-204ENST00000527836 TMEM126AQ9H061 195 aa7.33□□□□□ -1.24
SCN3B-204ENST00000527836 ANAPC11Q9NYG5 84 aa7.33□□□□□ -1.24
SCN3B-204ENST00000527836 IGKV2D-26A0A0A0MRZ7 120 aa7.32□□□□□ -1.24
SCN3B-204ENST00000527836 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
SCN3B-204ENST00000527836 TRAV12-1A0A0B4J245 112 aa7.31□□□□□ -1.24
SCN3B-204ENST00000527836 HSBP1O75506 76 aa7.31□□□□□ -1.24
SCN3B-204ENST00000527836 MEIG1Q5JSS6 88 aa7.31□□□□□ -1.24
SCN3B-204ENST00000527836 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
SCN3B-204ENST00000527836 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
SCN3B-204ENST00000527836 H0Y8G0 127 aa7.3□□□□□ -1.24
SCN3B-204ENST00000527836 FAM229BQ4G0N7 80 aa7.3□□□□□ -1.24
SCN3B-204ENST00000527836 CBLN2Q8IUK8 224 aa7.3□□□□□ -1.24
SCN3B-204ENST00000527836 LPAP08519 4548 aa7.29□□□□□ -1.24
SCN3B-204ENST00000527836 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
SCN3B-204ENST00000527836 HIGD2AQ9BW72 106 aa7.29□□□□□ -1.24
SCN3B-204ENST00000527836 LINC00587B1AMM8 73 aa7.28□□□□□ -1.24
SCN3B-204ENST00000527836 M0R378 163 aa7.28□□□□□ -1.24
SCN3B-204ENST00000527836 FAM19A2Q8N3H0 131 aa7.28□□□□□ -1.24
SCN3B-204ENST00000527836 SMIM13P0DJ93 91 aa7.27□□□□□ -1.25
SCN3B-204ENST00000527836 HERV-K104P63124 156 aa7.27□□□□□ -1.25
SCN3B-204ENST00000527836 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
SCN3B-204ENST00000527836 BOD1L2Q8IYS8 172 aa7.27□□□□□ -1.25
SCN3B-204ENST00000527836 MAP1LC3CQ9BXW4 147 aa7.27□□□□□ -1.25
SCN3B-204ENST00000527836 MYMXA0A1B0GTQ4 84 aa7.26□□□□□ -1.25
SCN3B-204ENST00000527836 S100A12P80511 92 aa7.26□□□□□ -1.25
SCN3B-204ENST00000527836 Q8NDZ9 215 aa7.26□□□□□ -1.25
SCN3B-204ENST00000527836 YPEL4Q96NS1 127 aa7.26□□□□□ -1.25
SCN3B-204ENST00000527836 NCR3O14931 201 aa7.25□□□□□ -1.25
SCN3B-204ENST00000527836 LEPROTL1O95214 131 aa7.25□□□□□ -1.25
SCN3B-204ENST00000527836 MIR7-3HGQ8N6C7 128 aa7.25□□□□□ -1.25
SCN3B-204ENST00000527836 PLEKHB2Q96CS7 222 aa7.25□□□□□ -1.25
SCN3B-204ENST00000527836 NDUFA12Q9UI09 145 aa7.25□□□□□ -1.25
SCN3B-204ENST00000527836 RETNLBQ9BQ08 111 aa7.24□□□□□ -1.25
SCN3B-204ENST00000527836 ZNF706Q9Y5V0 76 aaPredicted RBP7.24□□□□□ -1.25
SCN3B-204ENST00000527836 PRYO14603 147 aa7.23□□□□□ -1.25
SCN3B-204ENST00000527836 TRGC2P03986 189 aa7.23□□□□□ -1.25
SCN3B-204ENST00000527836 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
SCN3B-204ENST00000527836 PLNP26678 52 aa7.22□□□□□ -1.25
SCN3B-204ENST00000527836 HERVK_113P61574 105 aa7.22□□□□□ -1.25
SCN3B-204ENST00000527836 HSPB8Q9UJY1 196 aa7.22□□□□□ -1.25
SCN3B-204ENST00000527836 SERF1AO75920 110 aa7.21□□□□□ -1.26
SCN3B-204ENST00000527836 FABP4P15090 132 aa7.21□□□□□ -1.26
SCN3B-204ENST00000527836 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
SCN3B-204ENST00000527836 A0A0U1RQV1 116 aa7.2□□□□□ -1.26
SCN3B-204ENST00000527836 LEPROTO15243 131 aa7.2□□□□□ -1.26
SCN3B-204ENST00000527836 C3orf22Q8N5N4 141 aa7.2□□□□□ -1.26
SCN3B-204ENST00000527836 SPRR4Q96PI1 79 aa7.2□□□□□ -1.26
SCN3B-204ENST00000527836 DPM2O94777 84 aa7.19□□□□□ -1.26
SCN3B-204ENST00000527836 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
SCN3B-204ENST00000527836 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
SCN3B-204ENST00000527836 LINC00337Q8N6G1 96 aa7.19□□□□□ -1.26
SCN3B-204ENST00000527836 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
SCN3B-204ENST00000527836 IGLV7-46A0A075B6I9 117 aa7.18□□□□□ -1.26
SCN3B-204ENST00000527836 TRBV10-3A0A0K0K1G6 114 aa7.18□□□□□ -1.26
SCN3B-204ENST00000527836 J3QQQ9 107 aa7.18□□□□□ -1.26
SCN3B-204ENST00000527836 CTAG1AP78358 180 aa7.18□□□□□ -1.26
SCN3B-204ENST00000527836 DAND5Q8N907 189 aa7.18□□□□□ -1.26
SCN3B-204ENST00000527836 SMCR5Q8TEV8 140 aa7.18□□□□□ -1.26
SCN3B-204ENST00000527836 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
SCN3B-204ENST00000527836 A6NJY4 79 aa7.17□□□□□ -1.26
SCN3B-204ENST00000527836 IGKCP01834 107 aa7.17□□□□□ -1.26
SCN3B-204ENST00000527836 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
SCN3B-204ENST00000527836 PPDPFQ9H3Y8 114 aa7.17□□□□□ -1.26
SCN3B-204ENST00000527836 DDTP30046 118 aa7.16□□□□□ -1.26
SCN3B-204ENST00000527836 NMUP48645 174 aa7.16□□□□□ -1.26
SCN3B-204ENST00000527836 TSPEAR-AS2P59090 65 aa7.16□□□□□ -1.26
SCN3B-204ENST00000527836 S100A7L2Q5SY68 101 aa7.16□□□□□ -1.26
SCN3B-204ENST00000527836 SPRR1AP35321 89 aa7.15□□□□□ -1.26
SCN3B-204ENST00000527836 TRBV10-2A0A0K0K1G8 114 aa7.14□□□□□ -1.27
SCN3B-204ENST00000527836 LINC00310P59036 64 aa7.14□□□□□ -1.27
SCN3B-204ENST00000527836 GAGE2AQ6NT46 116 aa7.14□□□□□ -1.27
SCN3B-204ENST00000527836 SLC7A5P1Q8MH63 180 aa7.14□□□□□ -1.27
SCN3B-204ENST00000527836 Q8NBF4 154 aa7.14□□□□□ -1.27
SCN3B-204ENST00000527836 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
SCN3B-204ENST00000527836 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
SCN3B-204ENST00000527836 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
SCN3B-204ENST00000527836 B5MCH6 92 aa7.12□□□□□ -1.27
SCN3B-204ENST00000527836 KRTAP4-16G5E9R7 235 aaPredicted RBP7.12□□□□□ -1.27
SCN3B-204ENST00000527836 SMCPP49901 116 aaPredicted RBP7.12□□□□□ -1.27
SCN3B-204ENST00000527836 NPC2P61916 151 aa7.12□□□□□ -1.27
SCN3B-204ENST00000527836 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
SCN3B-204ENST00000527836 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
SCN3B-204ENST00000527836 COLCA2A8K830 154 aa7.11□□□□□ -1.27
SCN3B-204ENST00000527836 JOSD1Q15040 202 aaPredicted RBP7.11□□□□□ -1.27
SCN3B-204ENST00000527836 NDUFC2O95298 119 aa7.1□□□□□ -1.27
SCN3B-204ENST00000527836 SPINK1P00995 79 aa7.1□□□□□ -1.27
SCN3B-204ENST00000527836 Q6ZRX8 168 aa7.1□□□□□ -1.27
SCN3B-204ENST00000527836 MUC2Q02817 5179 aa7.09□□□□□ -1.27
SCN3B-204ENST00000527836 TRAV23DV6A0A075B6W5 121 aa7.09□□□□□ -1.27
SCN3B-204ENST00000527836 LCE2BO14633 110 aa7.09□□□□□ -1.27
SCN3B-204ENST00000527836 HINT1P49773 126 aaPredicted RBP7.09□□□□□ -1.27
SCN3B-204ENST00000527836 MOBPQ13875 183 aa7.09□□□□□ -1.27
SCN3B-204ENST00000527836 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
SCN3B-204ENST00000527836 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
SCN3B-204ENST00000527836 CBY1Q9Y3M2 126 aa7.09□□□□□ -1.27
SCN3B-204ENST00000527836 A0A0J9YXY3 114 aa7.08□□□□□ -1.28
SCN3B-204ENST00000527836 E9PLD3 99 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms