RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
CAPN1-211ENST00000527739 TRGC2P03986 189 aa11.44□□□□□ -0.58
CAPN1-211ENST00000527739 CRYGAP11844 174 aa11.44□□□□□ -0.58
CAPN1-211ENST00000527739 TMEM238C9JI98 176 aa11.43□□□□□ -0.58
CAPN1-211ENST00000527739 TSPAN13O95857 204 aa11.43□□□□□ -0.58
CAPN1-211ENST00000527739 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
CAPN1-211ENST00000527739 A0A087X002 238 aa11.42□□□□□ -0.58
CAPN1-211ENST00000527739 PRLHP81277 87 aa11.42□□□□□ -0.58
CAPN1-211ENST00000527739 PRR4Q16378 134 aa11.42□□□□□ -0.58
CAPN1-211ENST00000527739 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
CAPN1-211ENST00000527739 TYMSOSQ8TAI1 123 aa11.42□□□□□ -0.58
CAPN1-211ENST00000527739 Q8NDZ9 215 aa11.41□□□□□ -0.58
CAPN1-211ENST00000527739 TMEM126AQ9H061 195 aa11.41□□□□□ -0.58
CAPN1-211ENST00000527739 SMIM13P0DJ93 91 aa11.4□□□□□ -0.58
CAPN1-211ENST00000527739 KRTAP13-1Q8IUC0 172 aa11.4□□□□□ -0.58
CAPN1-211ENST00000527739 SLC7A5P1Q8MH63 180 aa11.39□□□□□ -0.59
CAPN1-211ENST00000527739 SERF1AO75920 110 aa11.38□□□□□ -0.59
CAPN1-211ENST00000527739 LEPROTL1O95214 131 aa11.38□□□□□ -0.59
CAPN1-211ENST00000527739 M0R378 163 aa11.37□□□□□ -0.59
CAPN1-211ENST00000527739 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
CAPN1-211ENST00000527739 FABP4P15090 132 aa11.35□□□□□ -0.59
CAPN1-211ENST00000527739 HERV-K104P63124 156 aa11.35□□□□□ -0.59
CAPN1-211ENST00000527739 BOD1L2Q8IYS8 172 aa11.35□□□□□ -0.59
CAPN1-211ENST00000527739 MYMXA0A1B0GTQ4 84 aa11.34□□□□□ -0.59
CAPN1-211ENST00000527739 MIR7-3HGQ8N6C7 128 aa11.34□□□□□ -0.59
CAPN1-211ENST00000527739 LINC00587B1AMM8 73 aa11.33□□□□□ -0.6
CAPN1-211ENST00000527739 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
CAPN1-211ENST00000527739 HSPB8Q9UJY1 196 aa11.33□□□□□ -0.6
CAPN1-211ENST00000527739 IGKV2D-26A0A0A0MRZ7 120 aa11.32□□□□□ -0.6
CAPN1-211ENST00000527739 NCR3O14931 201 aa11.32□□□□□ -0.6
CAPN1-211ENST00000527739 LINC00310P59036 64 aa11.32□□□□□ -0.6
CAPN1-211ENST00000527739 KRTAP13-2Q52LG2 175 aa11.32□□□□□ -0.6
CAPN1-211ENST00000527739 FAM229BQ4G0N7 80 aa11.31□□□□□ -0.6
CAPN1-211ENST00000527739 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
CAPN1-211ENST00000527739 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
CAPN1-211ENST00000527739 MUC2Q02817 5179 aa11.3□□□□□ -0.6
CAPN1-211ENST00000527739 PLNP26678 52 aa11.3□□□□□ -0.6
CAPN1-211ENST00000527739 COLCA2A8K830 154 aa11.29□□□□□ -0.6
CAPN1-211ENST00000527739 LEPROTO15243 131 aa11.29□□□□□ -0.6
CAPN1-211ENST00000527739 PLEKHB2Q96CS7 222 aa11.29□□□□□ -0.6
CAPN1-211ENST00000527739 DPM2O94777 84 aa11.28□□□□□ -0.6
CAPN1-211ENST00000527739 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
CAPN1-211ENST00000527739 HERVK_113P61574 105 aa11.28□□□□□ -0.6
CAPN1-211ENST00000527739 DAND5Q8N907 189 aa11.27□□□□□ -0.61
CAPN1-211ENST00000527739 LINC00304Q8N9R0 145 aa11.27□□□□□ -0.61
CAPN1-211ENST00000527739 J3QQQ9 107 aa11.26□□□□□ -0.61
CAPN1-211ENST00000527739 PRYO14603 147 aa11.25□□□□□ -0.61
CAPN1-211ENST00000527739 IGKCP01834 107 aa11.25□□□□□ -0.61
CAPN1-211ENST00000527739 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
CAPN1-211ENST00000527739 ETDCA0A1B0GVM5 59 aa11.24□□□□□ -0.61
CAPN1-211ENST00000527739 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
CAPN1-211ENST00000527739 S100A12P80511 92 aa11.23□□□□□ -0.61
CAPN1-211ENST00000527739 C3orf22Q8N5N4 141 aa11.22□□□□□ -0.61
CAPN1-211ENST00000527739 RETNLBQ9BQ08 111 aa11.22□□□□□ -0.61
CAPN1-211ENST00000527739 KCNQ1DNQ9H478 68 aa11.22□□□□□ -0.61
CAPN1-211ENST00000527739 SPRR4Q96PI1 79 aa11.21□□□□□ -0.61
CAPN1-211ENST00000527739 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
CAPN1-211ENST00000527739 ZNF706Q9Y5V0 76 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-211ENST00000527739 NMUP48645 174 aa11.2□□□□□ -0.62
CAPN1-211ENST00000527739 LINC00337Q8N6G1 96 aa11.2□□□□□ -0.62
CAPN1-211ENST00000527739 SMCR5Q8TEV8 140 aa11.2□□□□□ -0.62
CAPN1-211ENST00000527739 DDTP30046 118 aa11.18□□□□□ -0.62
CAPN1-211ENST00000527739 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
CAPN1-211ENST00000527739 SPRR1AP35321 89 aa11.17□□□□□ -0.62
CAPN1-211ENST00000527739 NPC2P61916 151 aa11.16□□□□□ -0.62
CAPN1-211ENST00000527739 LOC107984156A0A0G2JMH3 177 aa11.15□□□□□ -0.62
CAPN1-211ENST00000527739 S100A7L2Q5SY68 101 aa11.15□□□□□ -0.62
CAPN1-211ENST00000527739 ARL17AQ8IVW1 177 aa11.15□□□□□ -0.62
CAPN1-211ENST00000527739 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BKO60814 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 S100A1P23297 94 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
CAPN1-211ENST00000527739 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-211ENST00000527739 KRTAP4-16G5E9R7 235 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-211ENST00000527739 SYS1-DBNDD2H3BUS1 97 aa11.13□□□□□ -0.63
CAPN1-211ENST00000527739 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
CAPN1-211ENST00000527739 B5MCH6 92 aa11.12□□□□□ -0.63
CAPN1-211ENST00000527739 E9PLD3 99 aa11.12□□□□□ -0.63
CAPN1-211ENST00000527739 GAGE2AQ6NT46 116 aa11.12□□□□□ -0.63
CAPN1-211ENST00000527739 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
CAPN1-211ENST00000527739 IGLV7-46A0A075B6I9 117 aa11.1□□□□□ -0.63
CAPN1-211ENST00000527739 NDUFC2O95298 119 aa11.1□□□□□ -0.63
CAPN1-211ENST00000527739 SPAG11AQ6PDA7 123 aa11.1□□□□□ -0.63
CAPN1-211ENST00000527739 Q8NBF4 154 aa11.09□□□□□ -0.63
CAPN1-211ENST00000527739 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
CAPN1-211ENST00000527739 CTAG1AP78358 180 aa11.08□□□□□ -0.64
CAPN1-211ENST00000527739 SOSTDC1Q6X4U4 206 aa11.08□□□□□ -0.64
CAPN1-211ENST00000527739 TRAV23DV6A0A075B6W5 121 aa11.07□□□□□ -0.64
CAPN1-211ENST00000527739 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-211ENST00000527739 IGLV6-57P01721 117 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms