RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 HUWE1Q7Z6Z7 4374 aaKnown RBP10.88□□□□□ -0.67
SNRNP35-204ENST00000527158 COX17Q14061 63 aa10.87□□□□□ -0.67
SNRNP35-204ENST00000527158 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
SNRNP35-204ENST00000527158 IGKV2-28A0A075B6P5 120 aa10.87□□□□□ -0.67
SNRNP35-204ENST00000527158 IGKV2D-28P01615 120 aa10.87□□□□□ -0.67
SNRNP35-204ENST00000527158 SDIM1Q6ZPB5 146 aa10.86□□□□□ -0.67
SNRNP35-204ENST00000527158 FAM218AQ96MZ4 157 aa10.86□□□□□ -0.67
SNRNP35-204ENST00000527158 KRTAP26-1Q6PEX3 210 aa10.85□□□□□ -0.67
SNRNP35-204ENST00000527158 IGKV2D-24A0A075B6R9 120 aa10.84□□□□□ -0.67
SNRNP35-204ENST00000527158 C6orf223Q8N319 242 aa10.84□□□□□ -0.67
SNRNP35-204ENST00000527158 SMIM11BQ8TCY0 68 aa10.84□□□□□ -0.67
SNRNP35-204ENST00000527158 UNQ6190/PRO20217Q6UXQ8 127 aa10.83□□□□□ -0.68
SNRNP35-204ENST00000527158 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
SNRNP35-204ENST00000527158 ZNF561-AS1K7EIQ3 104 aa10.83□□□□□ -0.68
SNRNP35-204ENST00000527158 LINC00526Q96FQ7 95 aa10.83□□□□□ -0.68
SNRNP35-204ENST00000527158 Q9HAA7 133 aa10.82□□□□□ -0.68
SNRNP35-204ENST00000527158 C9orf116Q5BN46 136 aaPredicted RBP10.82□□□□□ -0.68
SNRNP35-204ENST00000527158 C22orf24Q9Y442 160 aa10.82□□□□□ -0.68
SNRNP35-204ENST00000527158 A0A1B0GX51 115 aa10.81□□□□□ -0.68
SNRNP35-204ENST00000527158 C10orf25Q5T742 122 aa10.81□□□□□ -0.68
SNRNP35-204ENST00000527158 MUC7Q8TAX7 377 aa10.8□□□□□ -0.68
SNRNP35-204ENST00000527158 GVQW2A0A096LPI5 108 aaPredicted RBP10.79□□□□□ -0.68
SNRNP35-204ENST00000527158 HIGD2BQ4VC39 106 aa10.79□□□□□ -0.68
SNRNP35-204ENST00000527158 B5MCH6 92 aa10.79□□□□□ -0.68
SNRNP35-204ENST00000527158 OBSCN-AS1Q96MR7 158 aa10.79□□□□□ -0.68
SNRNP35-204ENST00000527158 NDUFC2O95298 119 aa10.78□□□□□ -0.68
SNRNP35-204ENST00000527158 C15orf56Q8N910 161 aa10.78□□□□□ -0.68
SNRNP35-204ENST00000527158 CAMK2N2Q96S95 79 aa10.78□□□□□ -0.68
SNRNP35-204ENST00000527158 OR13C6PQ8NH95 151 aa10.77□□□□□ -0.68
SNRNP35-204ENST00000527158 RMI2Q96E14 147 aa10.77□□□□□ -0.68
SNRNP35-204ENST00000527158 APLNQ9ULZ1 77 aa10.77□□□□□ -0.68
SNRNP35-204ENST00000527158 A0A087WYN8 130 aa10.77□□□□□ -0.69
SNRNP35-204ENST00000527158 GAGE2AQ6NT46 116 aa10.77□□□□□ -0.69
SNRNP35-204ENST00000527158 CCDC179H3BU77 68 aa10.76□□□□□ -0.69
SNRNP35-204ENST00000527158 COL7A1Q02388 2944 aa10.76□□□□□ -0.69
SNRNP35-204ENST00000527158 C2orf48Q96LS8 159 aa10.76□□□□□ -0.69
SNRNP35-204ENST00000527158 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
SNRNP35-204ENST00000527158 SMCR5Q8TEV8 140 aa10.76□□□□□ -0.69
SNRNP35-204ENST00000527158 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
SNRNP35-204ENST00000527158 STAB2Q8WWQ8 2551 aa10.75□□□□□ -0.69
SNRNP35-204ENST00000527158 NUPR2A6NF83 97 aa10.75□□□□□ -0.69
SNRNP35-204ENST00000527158 KRTAP21-3Q3LHN1 58 aa10.75□□□□□ -0.69
SNRNP35-204ENST00000527158 F8WDY8 70 aa10.75□□□□□ -0.69
SNRNP35-204ENST00000527158 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
SNRNP35-204ENST00000527158 DNAH9Q9NYC9 4486 aa10.74□□□□□ -0.69
SNRNP35-204ENST00000527158 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
SNRNP35-204ENST00000527158 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
SNRNP35-204ENST00000527158 LECT2O14960 151 aa10.74□□□□□ -0.69
SNRNP35-204ENST00000527158 LINC00167Q96N53 147 aa10.73□□□□□ -0.69
SNRNP35-204ENST00000527158 TMEM126AQ9H061 195 aa10.72□□□□□ -0.69
SNRNP35-204ENST00000527158 Q6ZRU5 148 aa10.72□□□□□ -0.69
SNRNP35-204ENST00000527158 SS18L2Q9UHA2 77 aa10.72□□□□□ -0.69
SNRNP35-204ENST00000527158 JMJD7-PLA2G4BH0Y9G9 81 aa10.71□□□□□ -0.69
SNRNP35-204ENST00000527158 SVIPQ8NHG7 77 aa10.71□□□□□ -0.69
SNRNP35-204ENST00000527158 PRR3P79522 188 aaKnown RBP10.69□□□□□ -0.7
SNRNP35-204ENST00000527158 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
SNRNP35-204ENST00000527158 Q6JHZ5 121 aa10.69□□□□□ -0.7
SNRNP35-204ENST00000527158 TMEM256-PLSCR3K7ERE1 68 aa10.68□□□□□ -0.7
SNRNP35-204ENST00000527158 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
SNRNP35-204ENST00000527158 C14orf132Q9NPU4 83 aa10.68□□□□□ -0.7
SNRNP35-204ENST00000527158 USP17L23D6RBM5 183 aa10.67□□□□□ -0.7
SNRNP35-204ENST00000527158 NDUFC2-KCTD14E9PQ53 114 aa10.66□□□□□ -0.7
SNRNP35-204ENST00000527158 UQCRQO14949 82 aa10.66□□□□□ -0.7
SNRNP35-204ENST00000527158 Q8N814 137 aa10.66□□□□□ -0.7
SNRNP35-204ENST00000527158 ATOX1O00244 68 aa10.66□□□□□ -0.7
SNRNP35-204ENST00000527158 CASC10Q5T4H9 136 aa10.66□□□□□ -0.7
SNRNP35-204ENST00000527158 XAGE1AQ9HD64 81 aa10.66□□□□□ -0.7
SNRNP35-204ENST00000527158 NCR3O14931 201 aa10.65□□□□□ -0.7
SNRNP35-204ENST00000527158 HIST1H4AP62805 103 aaKnown RBP10.65□□□□□ -0.7
SNRNP35-204ENST00000527158 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
SNRNP35-204ENST00000527158 CCKP06307 115 aa10.65□□□□□ -0.71
SNRNP35-204ENST00000527158 Q8NDZ9 215 aa10.65□□□□□ -0.71
SNRNP35-204ENST00000527158 H3BQ85 93 aa10.64□□□□□ -0.71
SNRNP35-204ENST00000527158 KRTAP1-5Q9BYS1 174 aa10.64□□□□□ -0.71
SNRNP35-204ENST00000527158 ATP5EP2Q5VTU8 51 aa10.63□□□□□ -0.71
SNRNP35-204ENST00000527158 C9orf129Q5T035 196 aaKnown RBP10.62□□□□□ -0.71
SNRNP35-204ENST00000527158 DNHD1Q96M86 4753 aa10.62□□□□□ -0.71
SNRNP35-204ENST00000527158 MEGF8Q7Z7M0 2845 aa10.61□□□□□ -0.71
SNRNP35-204ENST00000527158 PSCAO43653 123 aa10.61□□□□□ -0.71
SNRNP35-204ENST00000527158 LINC00846Q9NV44 126 aa10.61□□□□□ -0.71
SNRNP35-204ENST00000527158 SLPIP03973 132 aa10.6□□□□□ -0.71
SNRNP35-204ENST00000527158 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
SNRNP35-204ENST00000527158 Q6ZRP5 223 aa10.6□□□□□ -0.71
SNRNP35-204ENST00000527158 COX7CP15954 63 aa10.6□□□□□ -0.71
SNRNP35-204ENST00000527158 C9orf153Q5TBE3 101 aa10.6□□□□□ -0.71
SNRNP35-204ENST00000527158 TLX1NBP0CAT3 122 aa10.58□□□□□ -0.72
SNRNP35-204ENST00000527158 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
SNRNP35-204ENST00000527158 LINC00575Q6W349 94 aa10.58□□□□□ -0.72
SNRNP35-204ENST00000527158 NBDYA0A0U1RRE5 68 aa10.57□□□□□ -0.72
SNRNP35-204ENST00000527158 VPREB1P12018 145 aa10.56□□□□□ -0.72
SNRNP35-204ENST00000527158 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
SNRNP35-204ENST00000527158 GHRHP01286 108 aa10.55□□□□□ -0.72
SNRNP35-204ENST00000527158 PRKDCP78527 4128 aaKnown RBP10.55□□□□□ -0.72
SNRNP35-204ENST00000527158 DYNC2H1Q8NCM8 4307 aaKnown RBP10.55□□□□□ -0.72
SNRNP35-204ENST00000527158 M0R378 163 aa10.55□□□□□ -0.72
SNRNP35-204ENST00000527158 hADV29S1A0JD25 119 aa10.54□□□□□ -0.72
SNRNP35-204ENST00000527158 CRYGAP11844 174 aa10.54□□□□□ -0.72
SNRNP35-204ENST00000527158 IGKV3D-7A0A0C4DH55 119 aa10.53□□□□□ -0.72
SNRNP35-204ENST00000527158 TRBV10-3A0A0K0K1G6 114 aa10.53□□□□□ -0.72
SNRNP35-204ENST00000527158 PDE6GP18545 87 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms