RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 PIGBOS1A0A0B4J2F0 54 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 MCRIP1C9JLW8 97 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 LYRM1O43325 122 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 GUCA1AP43080 201 aaPredicted RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 PPP3R1P63098 170 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 DCDP81605 110 aaKnown RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 MRPL54Q6P161 138 aaKnown RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 SMIM5Q71RC9 77 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 ATOH7Q8N100 152 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 ATP6V0E2Q8NHE4 81 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 ASXL3Q9C0F0 2248 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 J3QLW9 94 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 MT-ATP8P03928 68 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 SPINK8P0C7L1 97 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 COX7CP15954 63 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 UBE2D3P61077 147 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 ASB16-AS1Q495Z4 193 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 C4orf3Q8WVX3 66 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 TCEAL7Q9BRU2 100 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 SNRNP25Q9BV90 132 aaKnown RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 ORMDL1Q9P0S3 153 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 CNOT1A5YKK6 2376 aaKnown RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 PTPRZ1P23471 2315 aaPredicted RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 SFTA2Q6UW10 78 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 PSMG3Q9BT73 122 aaPredicted RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 CCDC167Q9P0B6 97 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 MRPL36Q9P0J6 103 aaKnown RBP0.53□□□□□ -2.32
KNL1-203ENST00000526913 PCNX1Q96RV3 2341 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 WNK1Q9H4A3 2382 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 TLN2Q9Y4G6 2542 aa0.53□□□□□ -2.32
KNL1-203ENST00000526913 DYNC1H1Q14204 4646 aaKnown RBP0.53□□□□□ -2.33
KNL1-203ENST00000526913 CACNA1EQ15878 2313 aa0.53□□□□□ -2.33
KNL1-203ENST00000526913 A0A087WTM6 91 aa0.53□□□□□ -2.33
KNL1-203ENST00000526913 C9orf153Q5TBE3 101 aa0.53□□□□□ -2.33
KNL1-203ENST00000526913 RIF1Q5UIP0 2472 aaKnown RBP0.53□□□□□ -2.33
KNL1-203ENST00000526913 OR2T2Q6IF00 324 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 Q86TA4 180 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 PNMA8CA0A1B0GUJ8 204 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 PDE6GP18545 87 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 HSD52Q0P140 79 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 SAR1AQ9NR31 198 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 MRPL35Q9NZE8 188 aaKnown RBP0.52□□□□□ -2.33
KNL1-203ENST00000526913 RGPD2P0DJD1 1756 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
KNL1-203ENST00000526913 MYO7BQ6PIF6 2116 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 HCG22E2RYF7 251 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 HYPMO75409 117 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 SNCGO76070 127 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 HTN3P15516 51 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 KRTAP12-4P60329 112 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 RHOHQ15669 191 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 ZNF56Q15929 161 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 LCE1CQ5T751 118 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 LCE1BQ5T7P3 118 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 TTC9CQ8N5M4 171 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 ZNF563Q8TA94 476 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 BPESC1Q9GZL8 116 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 TMEM106BQ9NUM4 274 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 APC2O95996 2303 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 FXYD3Q14802 87 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 C9orf116Q5BN46 136 aaPredicted RBP0.52□□□□□ -2.33
KNL1-203ENST00000526913 FAM74A1Q5RGS3 127 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 C20orf197Q8N268 126 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 VSTM2AQ8TAG5 236 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 AKAP6Q13023 2319 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 TNCP24821 2201 aa0.52□□□□□ -2.33
KNL1-203ENST00000526913 TRAV12-3A0A0B4J271 114 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 A0A0J9YY99 117 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 JMJD7-PLA2G4BH0Y9G9 81 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 S100A8P05109 93 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 SMIM6P0DI80 62 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 PLGLAQ15195 96 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 Q6AWC8 147 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 PPDPFLQ8WWR9 84 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 TTTY10Q9BZA0 68 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 SERP1Q9Y6X1 66 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.51□□□□□ -2.33
KNL1-203ENST00000526913 POLR2JP52435 117 aaKnown RBP0.51□□□□□ -2.33
KNL1-203ENST00000526913 PKIAP61925 76 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 TMEM218A2RU14 115 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 CCKP06307 115 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 TPPP2P59282 170 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 SPTSSAQ969W0 71 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 DNAJC13O75165 2243 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 KRTAP2-3P0C7H8 128 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 Q56UQ5 140 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 C2orf82Q6UX34 121 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 LINC00526Q96FQ7 95 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 KRTAP2-4Q9BYR9 128 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 TMEM30CPA0ZSE6 113 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 NUPR1O60356 82 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 IGHV3-33P01772 117 aa0.51□□□□□ -2.33
KNL1-203ENST00000526913 SONP18583 2426 aaKnown RBP0.5□□□□□ -2.33
KNL1-203ENST00000526913 TRGV2A0A075B6R0 118 aa0.5□□□□□ -2.33
KNL1-203ENST00000526913 TRAV2A0A0B4J234 112 aa0.5□□□□□ -2.33
KNL1-203ENST00000526913 TCRBV3S1A0A5B6 114 aa0.5□□□□□ -2.33
KNL1-203ENST00000526913 H3BRM9 83 aa0.5□□□□□ -2.33
KNL1-203ENST00000526913 K7EIL1 84 aa0.5□□□□□ -2.33
KNL1-203ENST00000526913 PDCD5O14737 125 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms