RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 LINC00846Q9NV44 126 aa13.7□□□□□ -0.22
SMIM3-201ENST00000526627 KRTAP10-11P60412 298 aa13.69□□□□□ -0.22
SMIM3-201ENST00000526627 OXLD1Q5BKU9 147 aa13.69□□□□□ -0.22
SMIM3-201ENST00000526627 GVQW2A0A096LPI5 108 aaPredicted RBP13.68□□□□□ -0.22
SMIM3-201ENST00000526627 S100A7L2Q5SY68 101 aa13.67□□□□□ -0.22
SMIM3-201ENST00000526627 C6orf48Q9UBA6 75 aa13.67□□□□□ -0.22
SMIM3-201ENST00000526627 LINC00575Q6W349 94 aa13.66□□□□□ -0.22
SMIM3-201ENST00000526627 WFDC10BQ8IUB3 73 aa13.66□□□□□ -0.22
SMIM3-201ENST00000526627 IGLV6-57P01721 117 aa13.65□□□□□ -0.22
SMIM3-201ENST00000526627 KPRPQ5T749 579 aaPredicted RBP13.65□□□□□ -0.22
SMIM3-201ENST00000526627 TMEM256-PLSCR3K7ERE1 68 aa13.65□□□□□ -0.22
SMIM3-201ENST00000526627 H3BNG1 76 aa13.64□□□□□ -0.23
SMIM3-201ENST00000526627 CCKP06307 115 aa13.64□□□□□ -0.23
SMIM3-201ENST00000526627 KRTAP26-1Q6PEX3 210 aa13.64□□□□□ -0.23
SMIM3-201ENST00000526627 SS18L2Q9UHA2 77 aa13.64□□□□□ -0.23
SMIM3-201ENST00000526627 RPL18AQ02543 176 aaKnown RBP13.63□□□□□ -0.23
SMIM3-201ENST00000526627 JMJD7-PLA2G4BH0Y9G9 81 aa13.62□□□□□ -0.23
SMIM3-201ENST00000526627 Q6ZTC4 211 aa13.62□□□□□ -0.23
SMIM3-201ENST00000526627 Q6JHZ5 121 aa13.62□□□□□ -0.23
SMIM3-201ENST00000526627 HIST1H4AP62805 103 aaKnown RBP13.6□□□□□ -0.23
SMIM3-201ENST00000526627 XAGE1AQ9HD64 81 aa13.59□□□□□ -0.23
SMIM3-201ENST00000526627 IGKV3D-7A0A0C4DH55 119 aa13.59□□□□□ -0.23
SMIM3-201ENST00000526627 hADV29S1A0JD25 119 aa13.58□□□□□ -0.24
SMIM3-201ENST00000526627 HIGD2BQ4VC39 106 aa13.58□□□□□ -0.24
SMIM3-201ENST00000526627 TRBV10-3A0A0K0K1G6 114 aa13.57□□□□□ -0.24
SMIM3-201ENST00000526627 EGFEM1PQ0D2K5 195 aa13.57□□□□□ -0.24
SMIM3-201ENST00000526627 ESRGQ1W209 222 aa13.56□□□□□ -0.24
SMIM3-201ENST00000526627 C15orf56Q8N910 161 aa13.55□□□□□ -0.24
SMIM3-201ENST00000526627 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
SMIM3-201ENST00000526627 CAMK2N2Q96S95 79 aa13.53□□□□□ -0.24
SMIM3-201ENST00000526627 TRAV23DV6A0A075B6W5 121 aa13.52□□□□□ -0.24
SMIM3-201ENST00000526627 KRTAP24-1Q3LI83 254 aa13.52□□□□□ -0.25
SMIM3-201ENST00000526627 Q6ZRU5 148 aa13.52□□□□□ -0.25
SMIM3-201ENST00000526627 VPREB1P12018 145 aa13.51□□□□□ -0.25
SMIM3-201ENST00000526627 CMYA5Q8N3K9 4069 aa13.5□□□□□ -0.25
SMIM3-201ENST00000526627 C3orf22Q8N5N4 141 aa13.5□□□□□ -0.25
SMIM3-201ENST00000526627 DIRC1Q969H9 104 aa13.5□□□□□ -0.25
SMIM3-201ENST00000526627 A0A087WVE0 104 aa13.49□□□□□ -0.25
SMIM3-201ENST00000526627 Q6ZQY7 126 aa13.49□□□□□ -0.25
SMIM3-201ENST00000526627 C2orf48Q96LS8 159 aa13.49□□□□□ -0.25
SMIM3-201ENST00000526627 Q6ZQT0 140 aa13.48□□□□□ -0.25
SMIM3-201ENST00000526627 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
SMIM3-201ENST00000526627 ANK2Q01484 3957 aa13.48□□□□□ -0.25
SMIM3-201ENST00000526627 PKD1L1Q8TDX9 2849 aa13.48□□□□□ -0.25
SMIM3-201ENST00000526627 ZNF73O43830 326 aaPredicted RBP13.47□□□□□ -0.25
SMIM3-201ENST00000526627 RBM3P98179 157 aaKnown RBP13.47□□□□□ -0.25
SMIM3-201ENST00000526627 UQCRQO14949 82 aa13.47□□□□□ -0.25
SMIM3-201ENST00000526627 LINC01556Q5JQF7 62 aa13.47□□□□□ -0.25
SMIM3-201ENST00000526627 LOC110117498A0A087WWA1 95 aa13.46□□□□□ -0.25
SMIM3-201ENST00000526627 DEFB131BA0A096LNP1 70 aa13.46□□□□□ -0.26
SMIM3-201ENST00000526627 ATOX1O00244 68 aa13.46□□□□□ -0.26
SMIM3-201ENST00000526627 F8P00451 2351 aa13.46□□□□□ -0.26
SMIM3-201ENST00000526627 TENM3Q9P273 2699 aa13.46□□□□□ -0.26
SMIM3-201ENST00000526627 NDUFC2-KCTD14E9PQ53 114 aa13.45□□□□□ -0.26
SMIM3-201ENST00000526627 LAMTOR3Q9UHA4 124 aa13.45□□□□□ -0.26
SMIM3-201ENST00000526627 M0R2N4 97 aa13.44□□□□□ -0.26
SMIM3-201ENST00000526627 COX7CP15954 63 aa13.44□□□□□ -0.26
SMIM3-201ENST00000526627 ELOF1P60002 83 aaKnown RBP13.44□□□□□ -0.26
SMIM3-201ENST00000526627 C1orf43Q9BWL3 253 aa13.44□□□□□ -0.26
SMIM3-201ENST00000526627 COX7BP24311 80 aa13.44□□□□□ -0.26
SMIM3-201ENST00000526627 C11orf45Q8TAV5 145 aa13.44□□□□□ -0.26
SMIM3-201ENST00000526627 M0R378 163 aa13.43□□□□□ -0.26
SMIM3-201ENST00000526627 C9orf153Q5TBE3 101 aa13.42□□□□□ -0.26
SMIM3-201ENST00000526627 TRBV7-6A0A0J9YX20 115 aa13.42□□□□□ -0.26
SMIM3-201ENST00000526627 ATP5EP2Q5VTU8 51 aa13.41□□□□□ -0.26
SMIM3-201ENST00000526627 Q6ZRP5 223 aa13.41□□□□□ -0.26
SMIM3-201ENST00000526627 IGKV2D-24A0A075B6R9 120 aa13.41□□□□□ -0.26
SMIM3-201ENST00000526627 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.41□□□□□ -0.26
SMIM3-201ENST00000526627 DNAH3Q8TD57 4116 aa13.41□□□□□ -0.26
SMIM3-201ENST00000526627 H3BQ85 93 aa13.4□□□□□ -0.26
SMIM3-201ENST00000526627 FBN1P35555 2871 aaKnown RBP13.39□□□□□ -0.27
SMIM3-201ENST00000526627 USP17L23D6RBM5 183 aa13.39□□□□□ -0.27
SMIM3-201ENST00000526627 UBL5Q9BZL1 73 aa13.39□□□□□ -0.27
SMIM3-201ENST00000526627 DNAH10OSP0CZ25 163 aa13.38□□□□□ -0.27
SMIM3-201ENST00000526627 F8WDY8 70 aa13.37□□□□□ -0.27
SMIM3-201ENST00000526627 FAM19A1Q7Z5A9 133 aa13.36□□□□□ -0.27
SMIM3-201ENST00000526627 LINC00528Q8N1L1 170 aa13.36□□□□□ -0.27
SMIM3-201ENST00000526627 DSCR8Q96T75 97 aa13.36□□□□□ -0.27
SMIM3-201ENST00000526627 SYCNQ0VAF6 134 aa13.36□□□□□ -0.27
SMIM3-201ENST00000526627 CRYGAP11844 174 aa13.34□□□□□ -0.27
SMIM3-201ENST00000526627 TRBV7-4A0A0J9YYF1 115 aa13.33□□□□□ -0.28
SMIM3-201ENST00000526627 PDE6GP18545 87 aa13.33□□□□□ -0.28
SMIM3-201ENST00000526627 SERP2Q8N6R1 65 aa13.33□□□□□ -0.28
SMIM3-201ENST00000526627 STAB1Q9NY15 2570 aa13.33□□□□□ -0.28
SMIM3-201ENST00000526627 Q6ZVQ6 151 aa13.31□□□□□ -0.28
SMIM3-201ENST00000526627 SERTAD4-AS1Q5TG53 156 aa13.3□□□□□ -0.28
SMIM3-201ENST00000526627 CYSTM1Q9H1C7 97 aa13.3□□□□□ -0.28
SMIM3-201ENST00000526627 UPK3BQ9BT76 320 aa13.29□□□□□ -0.28
SMIM3-201ENST00000526627 LINC00588Q9Y4M8 146 aa13.29□□□□□ -0.28
SMIM3-201ENST00000526627 LINC01547P58512 204 aaPredicted RBP13.28□□□□□ -0.28
SMIM3-201ENST00000526627 GHRHP01286 108 aa13.28□□□□□ -0.28
SMIM3-201ENST00000526627 TRAV10A0A0B4J240 114 aa13.27□□□□□ -0.28
SMIM3-201ENST00000526627 CASC10Q5T4H9 136 aa13.27□□□□□ -0.28
SMIM3-201ENST00000526627 SMIM20Q8N5G0 67 aa13.27□□□□□ -0.28
SMIM3-201ENST00000526627 KCNQ1DNQ9H478 68 aa13.27□□□□□ -0.29
SMIM3-201ENST00000526627 C7orf33Q8WU49 177 aa13.26□□□□□ -0.29
SMIM3-201ENST00000526627 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
SMIM3-201ENST00000526627 PRB2P02812 416 aaPredicted RBP13.25□□□□□ -0.29
SMIM3-201ENST00000526627 TLX1NBP0CAT3 122 aa13.25□□□□□ -0.29
SMIM3-201ENST00000526627 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms