RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 LINC00158P58513 81 aa8□□□□□ -1.13
USH1C-203ENST00000526181 SFTA2Q6UW10 78 aa8□□□□□ -1.13
USH1C-203ENST00000526181 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
USH1C-203ENST00000526181 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
USH1C-203ENST00000526181 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
USH1C-203ENST00000526181 LRP2P98164 4655 aa7.99□□□□□ -1.13
USH1C-203ENST00000526181 UBE2AP49459 152 aa7.98□□□□□ -1.13
USH1C-203ENST00000526181 A0A087X002 238 aa7.97□□□□□ -1.13
USH1C-203ENST00000526181 SMIM13P0DJ93 91 aa7.97□□□□□ -1.13
USH1C-203ENST00000526181 FABP4P15090 132 aa7.97□□□□□ -1.13
USH1C-203ENST00000526181 RPL13AP40429 203 aaKnown RBP7.97□□□□□ -1.13
USH1C-203ENST00000526181 PRLHP81277 87 aa7.97□□□□□ -1.13
USH1C-203ENST00000526181 RPL24P83731 157 aaKnown RBP7.97□□□□□ -1.13
USH1C-203ENST00000526181 PMCHL2Q9BQD1 86 aa7.97□□□□□ -1.13
USH1C-203ENST00000526181 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
USH1C-203ENST00000526181 ANAPC11Q9NYG5 84 aa7.97□□□□□ -1.13
USH1C-203ENST00000526181 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
USH1C-203ENST00000526181 RNF213Q63HN8 5207 aa7.96□□□□□ -1.14
USH1C-203ENST00000526181 M0R378 163 aa7.95□□□□□ -1.14
USH1C-203ENST00000526181 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
USH1C-203ENST00000526181 FAM19A1Q7Z5A9 133 aa7.95□□□□□ -1.14
USH1C-203ENST00000526181 NDUFA12Q9UI09 145 aa7.95□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BKO60814 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BJP06899 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BOP23527 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BBP33778 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BDP58876 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BCP62807 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST2H2BEQ16778 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.94□□□□□ -1.14
USH1C-203ENST00000526181 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BHQ93079 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BNQ99877 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 HIST1H2BMQ99879 126 aa7.94□□□□□ -1.14
USH1C-203ENST00000526181 PLNP26678 52 aa7.93□□□□□ -1.14
USH1C-203ENST00000526181 HERV-K104P63124 156 aa7.93□□□□□ -1.14
USH1C-203ENST00000526181 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
USH1C-203ENST00000526181 NCR3O14931 201 aa7.92□□□□□ -1.14
USH1C-203ENST00000526181 LEPROTO15243 131 aa7.92□□□□□ -1.14
USH1C-203ENST00000526181 BOD1L2Q8IYS8 172 aa7.92□□□□□ -1.14
USH1C-203ENST00000526181 MYMXA0A1B0GTQ4 84 aa7.91□□□□□ -1.14
USH1C-203ENST00000526181 DPM2O94777 84 aa7.91□□□□□ -1.14
USH1C-203ENST00000526181 CRYGAP11844 174 aa7.91□□□□□ -1.14
USH1C-203ENST00000526181 KRTAP13-2Q52LG2 175 aa7.91□□□□□ -1.14
USH1C-203ENST00000526181 DAND5Q8N907 189 aa7.91□□□□□ -1.14
USH1C-203ENST00000526181 LOC105371267A0A1B0GV96 52 aa7.9□□□□□ -1.14
USH1C-203ENST00000526181 IGKCP01834 107 aa7.9□□□□□ -1.14
USH1C-203ENST00000526181 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
USH1C-203ENST00000526181 LPAP08519 4548 aa7.89□□□□□ -1.15
USH1C-203ENST00000526181 J3QQQ9 107 aa7.89□□□□□ -1.15
USH1C-203ENST00000526181 TSPAN13O95857 204 aa7.89□□□□□ -1.15
USH1C-203ENST00000526181 PLEKHB2Q96CS7 222 aa7.89□□□□□ -1.15
USH1C-203ENST00000526181 C5orf52A6NGY3 159 aa7.88□□□□□ -1.15
USH1C-203ENST00000526181 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
USH1C-203ENST00000526181 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
USH1C-203ENST00000526181 LINC00587B1AMM8 73 aa7.87□□□□□ -1.15
USH1C-203ENST00000526181 HERVK_113P61574 105 aa7.87□□□□□ -1.15
USH1C-203ENST00000526181 PRR4Q16378 134 aa7.87□□□□□ -1.15
USH1C-203ENST00000526181 COA6Q5JTJ3 125 aaKnown RBP7.87□□□□□ -1.15
USH1C-203ENST00000526181 LGALS3P17931 250 aaKnown RBP7.86□□□□□ -1.15
USH1C-203ENST00000526181 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
USH1C-203ENST00000526181 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
USH1C-203ENST00000526181 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
USH1C-203ENST00000526181 SYS1-DBNDD2H3BUS1 97 aa7.85□□□□□ -1.15
USH1C-203ENST00000526181 PRYO14603 147 aa7.85□□□□□ -1.15
USH1C-203ENST00000526181 S100A6P06703 90 aa7.85□□□□□ -1.15
USH1C-203ENST00000526181 IGKV2D-26A0A0A0MRZ7 120 aa7.84□□□□□ -1.15
USH1C-203ENST00000526181 SPRR1AP35321 89 aa7.84□□□□□ -1.15
USH1C-203ENST00000526181 NMUP48645 174 aa7.84□□□□□ -1.15
USH1C-203ENST00000526181 KCNQ1DNQ9H478 68 aa7.84□□□□□ -1.15
USH1C-203ENST00000526181 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
USH1C-203ENST00000526181 E9PLD3 99 aa7.83□□□□□ -1.16
USH1C-203ENST00000526181 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
USH1C-203ENST00000526181 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
USH1C-203ENST00000526181 A0A0J9YXY3 114 aa7.82□□□□□ -1.16
USH1C-203ENST00000526181 KRTAP4-16G5E9R7 235 aaPredicted RBP7.82□□□□□ -1.16
USH1C-203ENST00000526181 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
USH1C-203ENST00000526181 NPC2P61916 151 aa7.82□□□□□ -1.16
USH1C-203ENST00000526181 C3orf22Q8N5N4 141 aa7.82□□□□□ -1.16
USH1C-203ENST00000526181 LINC00337Q8N6G1 96 aa7.82□□□□□ -1.16
USH1C-203ENST00000526181 SPRR4Q96PI1 79 aa7.82□□□□□ -1.16
USH1C-203ENST00000526181 ADAMTSL4-AS1Q5T5F5 129 aa7.81□□□□□ -1.16
USH1C-203ENST00000526181 SOSTDC1Q6X4U4 206 aa7.81□□□□□ -1.16
USH1C-203ENST00000526181 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
USH1C-203ENST00000526181 ETDCA0A1B0GVM5 59 aa7.8□□□□□ -1.16
USH1C-203ENST00000526181 DDTP30046 118 aa7.8□□□□□ -1.16
USH1C-203ENST00000526181 LINC01545Q5VT33 79 aa7.8□□□□□ -1.16
USH1C-203ENST00000526181 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
USH1C-203ENST00000526181 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
USH1C-203ENST00000526181 TRBV10-2A0A0K0K1G8 114 aa7.79□□□□□ -1.16
USH1C-203ENST00000526181 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
USH1C-203ENST00000526181 SPANXB1Q9NS25 103 aaPredicted RBP7.79□□□□□ -1.16
USH1C-203ENST00000526181 B5MCH6 92 aa7.78□□□□□ -1.16
USH1C-203ENST00000526181 C3orf79P0CE67 100 aa7.78□□□□□ -1.16
USH1C-203ENST00000526181 PET117Q6UWS5 81 aa7.78□□□□□ -1.16
USH1C-203ENST00000526181 HIST1H2BLQ99880 126 aa7.78□□□□□ -1.16
USH1C-203ENST00000526181 TTTY13Q9BZ97 58 aa7.78□□□□□ -1.16
USH1C-203ENST00000526181 NDUFC2O95298 119 aa7.77□□□□□ -1.17
USH1C-203ENST00000526181 LITAFQ99732 161 aa7.77□□□□□ -1.17
USH1C-203ENST00000526181 PPDPFQ9H3Y8 114 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms