RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TMEM167AQ8TBQ9 72 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 TMEM263Q8WUH6 116 aaKnown RBP1.54□□□□□ -2.16
CSDE1-211ENST00000525970 DPH3P1Q9H4G8 78 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 NDUFA4L2Q9NRX3 87 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 SERP1Q9Y6X1 66 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 PRRC2BQ5JSZ5 2229 aaKnown RBP1.54□□□□□ -2.16
CSDE1-211ENST00000525970 TRAV12-2A0A075B6T6 113 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 LINC01546A6NGU7 62 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 I3L3M4 83 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 LYNX1P0DP58 116 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 CRIP1P50238 77 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 WT1-ASQ06250 92 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 FAM74A4Q5TZK3 123 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 Q6JHZ5 121 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 C20orf197Q8N268 126 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 DEFB104AQ8WTQ1 72 aa1.53□□□□□ -2.16
CSDE1-211ENST00000525970 RPL39LQ96EH5 51 aaKnown RBP1.53□□□□□ -2.16
CSDE1-211ENST00000525970 MRPL36Q9P0J6 103 aaKnown RBP1.53□□□□□ -2.16
CSDE1-211ENST00000525970 TRAV23DV6A0A075B6W5 121 aa1.52□□□□□ -2.17
CSDE1-211ENST00000525970 CCL3L1P16619 93 aa1.52□□□□□ -2.17
CSDE1-211ENST00000525970 ATP5EP56381 51 aaPredicted RBP1.52□□□□□ -2.17
CSDE1-211ENST00000525970 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
CSDE1-211ENST00000525970 ATP5EP2Q5VTU8 51 aa1.52□□□□□ -2.17
CSDE1-211ENST00000525970 NDUFA12Q9UI09 145 aa1.52□□□□□ -2.17
CSDE1-211ENST00000525970 SPAG17Q6Q759 2223 aa1.52□□□□□ -2.17
CSDE1-211ENST00000525970 MYO7BQ6PIF6 2116 aa1.52□□□□□ -2.17
CSDE1-211ENST00000525970 TECTAO75443 2155 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 A0A087WVE0 104 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 FAM223BA6NKX1 122 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 COX6B1P14854 86 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 RPL39P62891 51 aaKnown RBP1.51□□□□□ -2.17
CSDE1-211ENST00000525970 DEFB121Q5J5C9 76 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 Q6ZSA8 131 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 DEFB132Q7Z7B7 95 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 C5orf38Q86SI9 138 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 FAM223AQ8IWN6 122 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 DYNLRB2Q8TF09 96 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 GAFA1Q96PS6 74 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 UBL5Q9BZL1 73 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 MUC6Q6W4X9 2439 aa1.51□□□□□ -2.17
CSDE1-211ENST00000525970 FLG2Q5D862 2391 aaPredicted RBP1.5□□□□□ -2.17
CSDE1-211ENST00000525970 TRAV13-2A0A0B4J235 113 aa1.5□□□□□ -2.17
CSDE1-211ENST00000525970 F8WEM9 126 aa1.5□□□□□ -2.17
CSDE1-211ENST00000525970 I3L2K1 104 aa1.5□□□□□ -2.17
CSDE1-211ENST00000525970 NDUFC1O43677 76 aa1.5□□□□□ -2.17
CSDE1-211ENST00000525970 ENHOQ6UWT2 76 aa1.5□□□□□ -2.17
CSDE1-211ENST00000525970 CNFNQ9BYD5 112 aa1.5□□□□□ -2.17
CSDE1-211ENST00000525970 IGIPA6NJ69 53 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 JMJD7-PLA2G4BH0Y9G9 81 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 K7EIM0 57 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 NCR3O14931 201 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 LINC00158P58513 81 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 HAMPP81172 84 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 PRB3Q04118 309 aaPredicted RBP1.49□□□□□ -2.17
CSDE1-211ENST00000525970 WFDC9Q8NEX5 89 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 LINC01600Q96MT4 127 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 ESPL1Q14674 2120 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 TET1Q8NFU7 2136 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 COL6A6A6NMZ7 2263 aa1.49□□□□□ -2.17
CSDE1-211ENST00000525970 H0YGX0 51 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 NDUFA1O15239 70 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 ANGP03950 147 aaKnown RBP1.48□□□□□ -2.17
CSDE1-211ENST00000525970 CCKP06307 115 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 HTN1P15515 57 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 LIMD2Q9BT23 127 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 LINC00846Q9NV44 126 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 TOMM7Q9P0U1 55 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 UBE2D4Q9Y2X8 147 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 LENEPQ9Y5L5 61 aa1.48□□□□□ -2.17
CSDE1-211ENST00000525970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.47□□□□□ -2.17
CSDE1-211ENST00000525970 BCE1O60756 84 aa1.47□□□□□ -2.17
CSDE1-211ENST00000525970 NREPQ16612 68 aa1.47□□□□□ -2.17
CSDE1-211ENST00000525970 VMO1Q7Z5L0 202 aa1.47□□□□□ -2.17
CSDE1-211ENST00000525970 SPTSSBQ8NFR3 76 aa1.47□□□□□ -2.17
CSDE1-211ENST00000525970 AMELXQ99217 191 aa1.47□□□□□ -2.17
CSDE1-211ENST00000525970 LINC00474Q9P2X8 69 aa1.47□□□□□ -2.17
CSDE1-211ENST00000525970 HELZ2Q9BYK8 2649 aaKnown RBP1.46□□□□□ -2.18
CSDE1-211ENST00000525970 TRBV10-3A0A0K0K1G6 114 aa1.46□□□□□ -2.18
CSDE1-211ENST00000525970 H7BZZ5 65 aa1.46□□□□□ -2.18
CSDE1-211ENST00000525970 POLR2KP53803 58 aaKnown RBP1.46□□□□□ -2.18
CSDE1-211ENST00000525970 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
CSDE1-211ENST00000525970 COX7B2Q8TF08 81 aa1.46□□□□□ -2.18
CSDE1-211ENST00000525970 CHKB-CPT1BH3BT56 60 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 M0QY20 66 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 PDE6GP18545 87 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 KRTAP10-4P60372 401 aaPredicted RBP1.45□□□□□ -2.18
CSDE1-211ENST00000525970 KLKP1Q107X0 134 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 Q8N6K4 173 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 FDCSPQ8NFU4 85 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 WFDC10AQ9H1F0 79 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 CDKN2A-AS1Q9UH64 79 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 MED12Q93074 2177 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 ZGRF1Q86YA3 2104 aa1.45□□□□□ -2.18
CSDE1-211ENST00000525970 TRBV10-1A0A0K0K1A3 114 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 NDUFA4O00483 81 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 DEFB1P60022 68 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 SPINK13Q1W4C9 94 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 CSAG1Q6PB30 78 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms