RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
SMCO4-202ENST00000525141 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
SMCO4-202ENST00000525141 C3orf79P0CE67 100 aa7.73□□□□□ -1.17
SMCO4-202ENST00000525141 PLA2G2DQ9UNK4 145 aa7.73□□□□□ -1.17
SMCO4-202ENST00000525141 LEPROTO15243 131 aa7.72□□□□□ -1.17
SMCO4-202ENST00000525141 S100A6P06703 90 aa7.72□□□□□ -1.17
SMCO4-202ENST00000525141 HERVK_113P61574 105 aa7.72□□□□□ -1.17
SMCO4-202ENST00000525141 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
SMCO4-202ENST00000525141 FAM168BA1KXE4 195 aa7.71□□□□□ -1.18
SMCO4-202ENST00000525141 HERV-K104P63124 156 aa7.71□□□□□ -1.18
SMCO4-202ENST00000525141 SPINK6Q6UWN8 80 aa7.71□□□□□ -1.18
SMCO4-202ENST00000525141 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.18
SMCO4-202ENST00000525141 KRTAP7-1Q8IUC3 87 aa7.71□□□□□ -1.18
SMCO4-202ENST00000525141 PLEKHB2Q96CS7 222 aa7.71□□□□□ -1.18
SMCO4-202ENST00000525141 XAGE1AQ9HD64 81 aa7.71□□□□□ -1.18
SMCO4-202ENST00000525141 PFN2P35080 140 aa7.7□□□□□ -1.18
SMCO4-202ENST00000525141 KRTDAPP60985 99 aa7.7□□□□□ -1.18
SMCO4-202ENST00000525141 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
SMCO4-202ENST00000525141 HIST3H2BBQ8N257 126 aa7.7□□□□□ -1.18
SMCO4-202ENST00000525141 NDUFA12Q9UI09 145 aa7.7□□□□□ -1.18
SMCO4-202ENST00000525141 MYMXA0A1B0GTQ4 84 aa7.69□□□□□ -1.18
SMCO4-202ENST00000525141 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
SMCO4-202ENST00000525141 J3QQQ9 107 aa7.69□□□□□ -1.18
SMCO4-202ENST00000525141 S100A2P29034 98 aa7.69□□□□□ -1.18
SMCO4-202ENST00000525141 FAM19A5Q7Z5A7 132 aaPredicted RBP7.69□□□□□ -1.18
SMCO4-202ENST00000525141 PSORS1C2Q9UIG4 136 aa7.69□□□□□ -1.18
SMCO4-202ENST00000525141 E9PLD3 99 aa7.68□□□□□ -1.18
SMCO4-202ENST00000525141 NMUP48645 174 aa7.68□□□□□ -1.18
SMCO4-202ENST00000525141 AKR1D1P51857 326 aa7.68□□□□□ -1.18
SMCO4-202ENST00000525141 HIST1H2BLQ99880 126 aa7.68□□□□□ -1.18
SMCO4-202ENST00000525141 C20orf202A1L168 122 aa7.67□□□□□ -1.18
SMCO4-202ENST00000525141 M0QXV9 152 aa7.67□□□□□ -1.18
SMCO4-202ENST00000525141 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
SMCO4-202ENST00000525141 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
SMCO4-202ENST00000525141 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
SMCO4-202ENST00000525141 TP73-AS1Q9UF72 201 aa7.67□□□□□ -1.18
SMCO4-202ENST00000525141 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
SMCO4-202ENST00000525141 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
SMCO4-202ENST00000525141 LINC00158P58513 81 aa7.66□□□□□ -1.18
SMCO4-202ENST00000525141 SNRPEP62304 92 aaKnown RBP7.66□□□□□ -1.18
SMCO4-202ENST00000525141 LBHQ53QV2 105 aaPredicted RBP7.66□□□□□ -1.18
SMCO4-202ENST00000525141 IGLV5-37A0A075B6J1 123 aa7.65□□□□□ -1.18
SMCO4-202ENST00000525141 C5orf52A6NGY3 159 aa7.65□□□□□ -1.18
SMCO4-202ENST00000525141 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
SMCO4-202ENST00000525141 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
SMCO4-202ENST00000525141 LRP2P98164 4655 aa7.64□□□□□ -1.19
SMCO4-202ENST00000525141 RPL24P83731 157 aaKnown RBP7.63□□□□□ -1.19
SMCO4-202ENST00000525141 MRPL55Q7Z7F7 128 aaKnown RBP7.63□□□□□ -1.19
SMCO4-202ENST00000525141 KRTAP9-9Q9BYP9 154 aa7.63□□□□□ -1.19
SMCO4-202ENST00000525141 KRTAP9-4Q9BYQ2 154 aa7.63□□□□□ -1.19
SMCO4-202ENST00000525141 TMA7Q9Y2S6 64 aaKnown RBP7.63□□□□□ -1.19
SMCO4-202ENST00000525141 A0A0U1RRA0 63 aa7.62□□□□□ -1.19
SMCO4-202ENST00000525141 UBE2BP63146 152 aa7.62□□□□□ -1.19
SMCO4-202ENST00000525141 C1orf137Q5JT78 98 aa7.62□□□□□ -1.19
SMCO4-202ENST00000525141 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
SMCO4-202ENST00000525141 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
SMCO4-202ENST00000525141 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
SMCO4-202ENST00000525141 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
SMCO4-202ENST00000525141 GHRHP01286 108 aa7.61□□□□□ -1.19
SMCO4-202ENST00000525141 VPREB1P12018 145 aa7.61□□□□□ -1.19
SMCO4-202ENST00000525141 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
SMCO4-202ENST00000525141 LINC00167Q96N53 147 aa7.61□□□□□ -1.19
SMCO4-202ENST00000525141 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
SMCO4-202ENST00000525141 IGKV2D-26A0A0A0MRZ7 120 aa7.6□□□□□ -1.19
SMCO4-202ENST00000525141 A0A0J9YXY3 114 aa7.6□□□□□ -1.19
SMCO4-202ENST00000525141 IGLV7-43P04211 117 aa7.6□□□□□ -1.19
SMCO4-202ENST00000525141 ATOH7Q8N100 152 aa7.59□□□□□ -1.19
SMCO4-202ENST00000525141 ZNF815PA8K554 130 aa7.57□□□□□ -1.2
SMCO4-202ENST00000525141 TIMM17BO60830 172 aa7.57□□□□□ -1.2
SMCO4-202ENST00000525141 ANKRD39Q53RE8 183 aa7.57□□□□□ -1.2
SMCO4-202ENST00000525141 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
SMCO4-202ENST00000525141 Q8NDZ9 215 aa7.57□□□□□ -1.2
SMCO4-202ENST00000525141 IGLV1-50A0A075B6I6 118 aa7.56□□□□□ -1.2
SMCO4-202ENST00000525141 GAGE10A6NGK3 116 aa7.56□□□□□ -1.2
SMCO4-202ENST00000525141 RPL37AP8A6NKH3 93 aa7.56□□□□□ -1.2
SMCO4-202ENST00000525141 M0R378 163 aa7.56□□□□□ -1.2
SMCO4-202ENST00000525141 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
SMCO4-202ENST00000525141 DAND5Q8N907 189 aa7.56□□□□□ -1.2
SMCO4-202ENST00000525141 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
SMCO4-202ENST00000525141 PRR26Q8N8Z3 221 aa7.55□□□□□ -1.2
SMCO4-202ENST00000525141 MIEN1Q9BRT3 115 aa7.55□□□□□ -1.2
SMCO4-202ENST00000525141 HSBP1L1C9JCN9 74 aa7.54□□□□□ -1.2
SMCO4-202ENST00000525141 H0Y9J4 135 aa7.54□□□□□ -1.2
SMCO4-202ENST00000525141 SCGB1D1O95968 90 aa7.54□□□□□ -1.2
SMCO4-202ENST00000525141 LITAFQ99732 161 aa7.54□□□□□ -1.2
SMCO4-202ENST00000525141 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
SMCO4-202ENST00000525141 IGKV2-28A0A075B6P5 120 aa7.53□□□□□ -1.2
SMCO4-202ENST00000525141 BCE1O60756 84 aa7.53□□□□□ -1.2
SMCO4-202ENST00000525141 NDUFC2O95298 119 aa7.53□□□□□ -1.2
SMCO4-202ENST00000525141 IGKV2D-28P01615 120 aa7.53□□□□□ -1.2
SMCO4-202ENST00000525141 DIRC1Q969H9 104 aa7.53□□□□□ -1.2
SMCO4-202ENST00000525141 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
SMCO4-202ENST00000525141 TRBV10-2A0A0K0K1G8 114 aa7.52□□□□□ -1.21
SMCO4-202ENST00000525141 ZNF861PO60384 105 aa7.52□□□□□ -1.21
SMCO4-202ENST00000525141 PCP2Q8IVA1 136 aa7.52□□□□□ -1.21
SMCO4-202ENST00000525141 SOSTDC1Q6X4U4 206 aa7.51□□□□□ -1.21
SMCO4-202ENST00000525141 SCGB1D4Q6XE38 83 aa7.51□□□□□ -1.21
SMCO4-202ENST00000525141 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
SMCO4-202ENST00000525141 LPAP08519 4548 aa7.51□□□□□ -1.21
SMCO4-202ENST00000525141 TMEM238C9JI98 176 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms