RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 VPREB1P12018 145 aa7.71□□□□□ -1.18
TRAPPC4-205ENST00000525079 Q8NDZ9 215 aa7.71□□□□□ -1.18
TRAPPC4-205ENST00000525079 SFTA2Q6UW10 78 aa7.7□□□□□ -1.18
TRAPPC4-205ENST00000525079 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
TRAPPC4-205ENST00000525079 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
TRAPPC4-205ENST00000525079 RPL28P46779 137 aaKnown RBP7.69□□□□□ -1.18
TRAPPC4-205ENST00000525079 RPL24P83731 157 aaKnown RBP7.69□□□□□ -1.18
TRAPPC4-205ENST00000525079 HSPB8Q9UJY1 196 aa7.69□□□□□ -1.18
TRAPPC4-205ENST00000525079 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
TRAPPC4-205ENST00000525079 A6NJY4 79 aa7.68□□□□□ -1.18
TRAPPC4-205ENST00000525079 MEIG1Q5JSS6 88 aa7.68□□□□□ -1.18
TRAPPC4-205ENST00000525079 TMEM238C9JI98 176 aa7.67□□□□□ -1.18
TRAPPC4-205ENST00000525079 UBE2AP49459 152 aa7.67□□□□□ -1.18
TRAPPC4-205ENST00000525079 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
TRAPPC4-205ENST00000525079 S100A1P23297 94 aa7.66□□□□□ -1.18
TRAPPC4-205ENST00000525079 TSPEAR-AS2P59090 65 aa7.66□□□□□ -1.18
TRAPPC4-205ENST00000525079 LEPROTO15243 131 aa7.65□□□□□ -1.18
TRAPPC4-205ENST00000525079 DPM2O94777 84 aa7.65□□□□□ -1.18
TRAPPC4-205ENST00000525079 PLNP26678 52 aa7.65□□□□□ -1.18
TRAPPC4-205ENST00000525079 HERV-K104P63124 156 aa7.65□□□□□ -1.18
TRAPPC4-205ENST00000525079 KRTAP13-1Q8IUC0 172 aa7.65□□□□□ -1.18
TRAPPC4-205ENST00000525079 MIR7-3HGQ8N6C7 128 aa7.65□□□□□ -1.18
TRAPPC4-205ENST00000525079 ANAPC11Q9NYG5 84 aa7.65□□□□□ -1.18
TRAPPC4-205ENST00000525079 MYMXA0A1B0GTQ4 84 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 IGKCP01834 107 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 PRLHP81277 87 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 FAM19A1Q7Z5A9 133 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 MAP1LC3CQ9BXW4 147 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 TMEM126AQ9H061 195 aa7.64□□□□□ -1.19
TRAPPC4-205ENST00000525079 M0R378 163 aa7.63□□□□□ -1.19
TRAPPC4-205ENST00000525079 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
TRAPPC4-205ENST00000525079 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
TRAPPC4-205ENST00000525079 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
TRAPPC4-205ENST00000525079 A0A087X002 238 aa7.62□□□□□ -1.19
TRAPPC4-205ENST00000525079 J3QQQ9 107 aa7.62□□□□□ -1.19
TRAPPC4-205ENST00000525079 NCR3O14931 201 aa7.62□□□□□ -1.19
TRAPPC4-205ENST00000525079 HERVK_113P61574 105 aa7.62□□□□□ -1.19
TRAPPC4-205ENST00000525079 DAND5Q8N907 189 aa7.62□□□□□ -1.19
TRAPPC4-205ENST00000525079 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
TRAPPC4-205ENST00000525079 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
TRAPPC4-205ENST00000525079 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
TRAPPC4-205ENST00000525079 SYS1-DBNDD2H3BUS1 97 aa7.59□□□□□ -1.19
TRAPPC4-205ENST00000525079 CRYGAP11844 174 aa7.59□□□□□ -1.19
TRAPPC4-205ENST00000525079 TSPAN13O95857 204 aa7.58□□□□□ -1.2
TRAPPC4-205ENST00000525079 TYMSOSQ8TAI1 123 aa7.58□□□□□ -1.2
TRAPPC4-205ENST00000525079 NMUP48645 174 aa7.57□□□□□ -1.2
TRAPPC4-205ENST00000525079 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
TRAPPC4-205ENST00000525079 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
TRAPPC4-205ENST00000525079 E9PLD3 99 aa7.56□□□□□ -1.2
TRAPPC4-205ENST00000525079 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-205ENST00000525079 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
TRAPPC4-205ENST00000525079 PRYO14603 147 aa7.55□□□□□ -1.2
TRAPPC4-205ENST00000525079 NPC2P61916 151 aa7.55□□□□□ -1.2
TRAPPC4-205ENST00000525079 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 LOC107984156A0A0G2JMH3 177 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 C3orf79P0CE67 100 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 ADAMTSL4-AS1Q5T5F5 129 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 PET117Q6UWS5 81 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 ARL17AQ8IVW1 177 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 KCNQ1DNQ9H478 68 aa7.54□□□□□ -1.2
TRAPPC4-205ENST00000525079 KRTDAPP60985 99 aa7.53□□□□□ -1.2
TRAPPC4-205ENST00000525079 PRR4Q16378 134 aa7.53□□□□□ -1.2
TRAPPC4-205ENST00000525079 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
TRAPPC4-205ENST00000525079 MIEN1Q9BRT3 115 aa7.53□□□□□ -1.2
TRAPPC4-205ENST00000525079 ETDCA0A1B0GVM5 59 aa7.52□□□□□ -1.21
TRAPPC4-205ENST00000525079 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC4-205ENST00000525079 SPRR1AP35321 89 aa7.52□□□□□ -1.21
TRAPPC4-205ENST00000525079 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.21
TRAPPC4-205ENST00000525079 SOSTDC1Q6X4U4 206 aa7.52□□□□□ -1.21
TRAPPC4-205ENST00000525079 LRP2P98164 4655 aa7.52□□□□□ -1.21
TRAPPC4-205ENST00000525079 DDTP30046 118 aa7.51□□□□□ -1.21
TRAPPC4-205ENST00000525079 C3orf22Q8N5N4 141 aa7.51□□□□□ -1.21
TRAPPC4-205ENST00000525079 LINC00337Q8N6G1 96 aa7.51□□□□□ -1.21
TRAPPC4-205ENST00000525079 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
TRAPPC4-205ENST00000525079 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
TRAPPC4-205ENST00000525079 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC4-205ENST00000525079 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
TRAPPC4-205ENST00000525079 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
TRAPPC4-205ENST00000525079 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC4-205ENST00000525079 S100A12P80511 92 aa7.49□□□□□ -1.21
TRAPPC4-205ENST00000525079 S100A7L2Q5SY68 101 aa7.49□□□□□ -1.21
TRAPPC4-205ENST00000525079 ZNF815PA8K554 130 aa7.48□□□□□ -1.21
TRAPPC4-205ENST00000525079 NDUFC2O95298 119 aa7.48□□□□□ -1.21
TRAPPC4-205ENST00000525079 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
TRAPPC4-205ENST00000525079 LITAFQ99732 161 aa7.48□□□□□ -1.21
TRAPPC4-205ENST00000525079 PPDPFQ9H3Y8 114 aa7.48□□□□□ -1.21
TRAPPC4-205ENST00000525079 LPAP08519 4548 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms