RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 PSCAO43653 123 aa5.25□□□□□ -1.57
NECTIN1-204ENST00000524429 LGALS3P17931 250 aaKnown RBP5.25□□□□□ -1.57
NECTIN1-204ENST00000524429 C14orf177Q52M58 125 aa5.25□□□□□ -1.57
NECTIN1-204ENST00000524429 C1orf134Q5TEV5 83 aa5.25□□□□□ -1.57
NECTIN1-204ENST00000524429 PKD1P98161 4303 aa5.25□□□□□ -1.57
NECTIN1-204ENST00000524429 HSPG2P98160 4391 aa5.25□□□□□ -1.57
NECTIN1-204ENST00000524429 MYMXA0A1B0GTQ4 84 aa5.24□□□□□ -1.57
NECTIN1-204ENST00000524429 LRCOL1A6NCL2 159 aa5.24□□□□□ -1.57
NECTIN1-204ENST00000524429 TSTD3H0UI37 97 aa5.24□□□□□ -1.57
NECTIN1-204ENST00000524429 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
NECTIN1-204ENST00000524429 SLC25A34Q6PIV7 304 aa5.24□□□□□ -1.57
NECTIN1-204ENST00000524429 NTN5Q8WTR8 489 aaPredicted RBP5.24□□□□□ -1.57
NECTIN1-204ENST00000524429 NDUFA12Q9UI09 145 aa5.24□□□□□ -1.57
NECTIN1-204ENST00000524429 TRBV30A0A0K0K1B3 111 aa5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 ZNF815PA8K554 130 aa5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 LINC00587B1AMM8 73 aa5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 CNBPP62633 177 aaKnown RBP5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 COX17Q14061 63 aa5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 PCP2Q8IVA1 136 aa5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 HIGD1BQ9P298 99 aa5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 UQCR10Q9UDW1 63 aa5.23□□□□□ -1.57
NECTIN1-204ENST00000524429 TIMM17BO60830 172 aa5.22□□□□□ -1.57
NECTIN1-204ENST00000524429 RPL13AP40429 203 aaKnown RBP5.22□□□□□ -1.57
NECTIN1-204ENST00000524429 CKS1BP61024 79 aa5.22□□□□□ -1.57
NECTIN1-204ENST00000524429 MIEN1Q9BRT3 115 aa5.22□□□□□ -1.57
NECTIN1-204ENST00000524429 PPDPFQ9H3Y8 114 aa5.22□□□□□ -1.57
NECTIN1-204ENST00000524429 TOMM7Q9P0U1 55 aa5.22□□□□□ -1.57
NECTIN1-204ENST00000524429 A0A0J9YXY3 114 aa5.21□□□□□ -1.58
NECTIN1-204ENST00000524429 Q6ZVH6 145 aa5.21□□□□□ -1.58
NECTIN1-204ENST00000524429 C14orf144Q96I85 54 aa5.21□□□□□ -1.58
NECTIN1-204ENST00000524429 TTTY13Q9BZ97 58 aa5.21□□□□□ -1.58
NECTIN1-204ENST00000524429 A0A087WTM6 91 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 TMEM238C9JI98 176 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 RTL8CO15255 209 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 WFDC2Q14508 124 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 C2orf82Q6UX34 121 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 SCGB1D4Q6XE38 83 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 Q8N814 137 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 CAMK2N2Q96S95 79 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 LITAFQ99732 161 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 SPANXB1Q9NS25 103 aaPredicted RBP5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 PKIGQ9Y2B9 76 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
NECTIN1-204ENST00000524429 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 TLX1NBP0CAT3 122 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 SYCNQ0VAF6 134 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 CIRBPQ14011 172 aaKnown RBP5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 TAL2Q16559 108 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 LINC00336Q6ZUF6 198 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 C2orf91Q6ZV80 131 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 CARD19Q96LW7 228 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 SPANXDQ9BXN6 97 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 SPANXCQ9NY87 97 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 ERG28Q9UKR5 140 aa5.19□□□□□ -1.58
NECTIN1-204ENST00000524429 LOC107984156A0A0G2JMH3 177 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 LECT2O14960 151 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 XGP55808 180 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 UNQ6190/PRO20217Q6UXQ8 127 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 Q6ZRU5 148 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 ARL17AQ8IVW1 177 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 COPS9Q8WXC6 57 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 PRO1933Q9H354 126 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 C6orf48Q9UBA6 75 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 TP73-AS1Q9UF72 201 aa5.18□□□□□ -1.58
NECTIN1-204ENST00000524429 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
NECTIN1-204ENST00000524429 DDTP30046 118 aa5.17□□□□□ -1.58
NECTIN1-204ENST00000524429 HNRNPA3P51991 378 aaKnown RBP5.17□□□□□ -1.58
NECTIN1-204ENST00000524429 LINC00526Q96FQ7 95 aa5.17□□□□□ -1.58
NECTIN1-204ENST00000524429 IFITM1P13164 125 aa5.16□□□□□ -1.58
NECTIN1-204ENST00000524429 MEIG1Q5JSS6 88 aa5.16□□□□□ -1.58
NECTIN1-204ENST00000524429 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
NECTIN1-204ENST00000524429 LOC107984640A0A0U1RRK4 108 aa5.15□□□□□ -1.59
NECTIN1-204ENST00000524429 SMIM13P0DJ93 91 aa5.15□□□□□ -1.59
NECTIN1-204ENST00000524429 HSD52Q0P140 79 aa5.15□□□□□ -1.59
NECTIN1-204ENST00000524429 ADAMTSL4-AS1Q5T5F5 129 aa5.15□□□□□ -1.59
NECTIN1-204ENST00000524429 APOBP04114 4563 aaKnown RBP5.15□□□□□ -1.59
NECTIN1-204ENST00000524429 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
NECTIN1-204ENST00000524429 A0A1B0GVY2 172 aa5.14□□□□□ -1.59
NECTIN1-204ENST00000524429 PFN2P35080 140 aa5.14□□□□□ -1.59
NECTIN1-204ENST00000524429 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
NECTIN1-204ENST00000524429 MIR7-3HGQ8N6C7 128 aa5.14□□□□□ -1.59
NECTIN1-204ENST00000524429 HIST1H4GQ99525 98 aa5.14□□□□□ -1.59
NECTIN1-204ENST00000524429 DNAH8Q96JB1 4490 aa5.14□□□□□ -1.59
NECTIN1-204ENST00000524429 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 C16orf90A8MZG2 172 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 M0R143 59 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 LINC00158P58513 81 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 Q6ZRP5 223 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 CEND1Q8N111 149 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 LINC00308Q8TCZ7 52 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 SND1-IT1Q9HBX3 110 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 LINC00474Q9P2X8 69 aa5.13□□□□□ -1.59
NECTIN1-204ENST00000524429 NDUFC2O95298 119 aa5.12□□□□□ -1.59
NECTIN1-204ENST00000524429 FUSP35637 526 aaKnown RBP eCLIP5.12□□□□□ -1.59
NECTIN1-204ENST00000524429 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
NECTIN1-204ENST00000524429 CTAG1AP78358 180 aa5.11□□□□□ -1.59
NECTIN1-204ENST00000524429 SOSTDC1Q6X4U4 206 aa5.11□□□□□ -1.59
NECTIN1-204ENST00000524429 SDIM1Q6ZPB5 146 aa5.11□□□□□ -1.59
NECTIN1-204ENST00000524429 MTURNQ8N3F0 131 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms