RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PRYO14603 147 aa9.21□□□□□ -0.94
PVT1-220ENST00000524165 IGLV6-57P01721 117 aa9.21□□□□□ -0.94
PVT1-220ENST00000524165 SPRR1AP35321 89 aa9.21□□□□□ -0.94
PVT1-220ENST00000524165 COX17Q14061 63 aa9.21□□□□□ -0.94
PVT1-220ENST00000524165 Q8N8P6 123 aa9.21□□□□□ -0.94
PVT1-220ENST00000524165 SPINK8P0C7L1 97 aa9.2□□□□□ -0.94
PVT1-220ENST00000524165 MRPL54Q6P161 138 aaKnown RBP9.2□□□□□ -0.94
PVT1-220ENST00000524165 TIMM17AQ99595 171 aa9.2□□□□□ -0.94
PVT1-220ENST00000524165 MAP1LC3AQ9H492 121 aa9.2□□□□□ -0.94
PVT1-220ENST00000524165 ERG28Q9UKR5 140 aa9.2□□□□□ -0.94
PVT1-220ENST00000524165 LAMTOR2Q9Y2Q5 125 aa9.2□□□□□ -0.94
PVT1-220ENST00000524165 K7EMI3 77 aa9.19□□□□□ -0.94
PVT1-220ENST00000524165 LCE2BO14633 110 aa9.19□□□□□ -0.94
PVT1-220ENST00000524165 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
PVT1-220ENST00000524165 KRTAP6-3Q3LI67 103 aa9.17□□□□□ -0.94
PVT1-220ENST00000524165 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
PVT1-220ENST00000524165 ETDCA0A1B0GVM5 59 aa9.16□□□□□ -0.94
PVT1-220ENST00000524165 G0S2P27469 103 aa9.15□□□□□ -0.94
PVT1-220ENST00000524165 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
PVT1-220ENST00000524165 KCNQ1DNQ9H478 68 aa9.15□□□□□ -0.94
PVT1-220ENST00000524165 LINC00846Q9NV44 126 aa9.15□□□□□ -0.94
PVT1-220ENST00000524165 C9orf153Q5TBE3 101 aa9.14□□□□□ -0.95
PVT1-220ENST00000524165 Q6Q795 121 aa9.14□□□□□ -0.95
PVT1-220ENST00000524165 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
PVT1-220ENST00000524165 SLC51BQ86UW2 128 aa9.13□□□□□ -0.95
PVT1-220ENST00000524165 TOMM6Q96B49 74 aa9.13□□□□□ -0.95
PVT1-220ENST00000524165 BATF3Q9NR55 127 aa9.13□□□□□ -0.95
PVT1-220ENST00000524165 ERC2-IT1O76042 136 aa9.12□□□□□ -0.95
PVT1-220ENST00000524165 BLOC1S1P78537 153 aa9.12□□□□□ -0.95
PVT1-220ENST00000524165 H3BRM9 83 aa9.11□□□□□ -0.95
PVT1-220ENST00000524165 ERASQ7Z444 233 aa9.11□□□□□ -0.95
PVT1-220ENST00000524165 IGLV5-39A0A0G2JS06 123 aa9.1□□□□□ -0.95
PVT1-220ENST00000524165 SRP19P09132 144 aaKnown RBP9.1□□□□□ -0.95
PVT1-220ENST00000524165 ADIRFQ15847 76 aa9.1□□□□□ -0.95
PVT1-220ENST00000524165 ATP5L2Q7Z4Y8 100 aa9.1□□□□□ -0.95
PVT1-220ENST00000524165 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
PVT1-220ENST00000524165 B5MCH6 92 aa9.08□□□□□ -0.96
PVT1-220ENST00000524165 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
PVT1-220ENST00000524165 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
PVT1-220ENST00000524165 MT2AP02795 61 aa9.07□□□□□ -0.96
PVT1-220ENST00000524165 SCGB3A1Q96QR1 104 aa9.07□□□□□ -0.96
PVT1-220ENST00000524165 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
PVT1-220ENST00000524165 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
PVT1-220ENST00000524165 Q9BRP9 147 aa9.05□□□□□ -0.96
PVT1-220ENST00000524165 ADCYAP1P18509 176 aa9.04□□□□□ -0.96
PVT1-220ENST00000524165 RGS21Q2M5E4 152 aa9.04□□□□□ -0.96
PVT1-220ENST00000524165 KRTAP9-3Q9BYQ3 159 aa9.04□□□□□ -0.96
PVT1-220ENST00000524165 NAT8Q9UHE5 227 aa9.04□□□□□ -0.96
PVT1-220ENST00000524165 KRTAP19-6Q3LI70 58 aa9.03□□□□□ -0.96
PVT1-220ENST00000524165 TRBV10-3A0A0K0K1G6 114 aa9.02□□□□□ -0.97
PVT1-220ENST00000524165 NCR3O14931 201 aa9.02□□□□□ -0.97
PVT1-220ENST00000524165 S100A12P80511 92 aa9.02□□□□□ -0.97
PVT1-220ENST00000524165 ALKAL2Q6UX46 152 aa9.02□□□□□ -0.97
PVT1-220ENST00000524165 HRCT1Q6UXD1 115 aa9.02□□□□□ -0.97
PVT1-220ENST00000524165 LINC00158P58513 81 aa9.01□□□□□ -0.97
PVT1-220ENST00000524165 PMVKQ15126 192 aa9.01□□□□□ -0.97
PVT1-220ENST00000524165 NEBP20929 6669 aa9□□□□□ -0.97
PVT1-220ENST00000524165 LINC01549A6NIU2 74 aa9□□□□□ -0.97
PVT1-220ENST00000524165 Q6ZRX8 168 aa9□□□□□ -0.97
PVT1-220ENST00000524165 MT1FP04733 61 aa8.99□□□□□ -0.97
PVT1-220ENST00000524165 KIAA1644Q3SXP7 199 aa8.99□□□□□ -0.97
PVT1-220ENST00000524165 BOD1L2Q8IYS8 172 aa8.99□□□□□ -0.97
PVT1-220ENST00000524165 IGLC3P0DOY3 106 aa8.97□□□□□ -0.97
PVT1-220ENST00000524165 ZNF22P17026 224 aaPredicted RBP8.96□□□□□ -0.98
PVT1-220ENST00000524165 C20orf202A1L168 122 aa8.95□□□□□ -0.98
PVT1-220ENST00000524165 A0A0U1RRA0 63 aa8.94□□□□□ -0.98
PVT1-220ENST00000524165 C5orf52A6NGY3 159 aa8.93□□□□□ -0.98
PVT1-220ENST00000524165 CD164Q04900 197 aa8.93□□□□□ -0.98
PVT1-220ENST00000524165 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
PVT1-220ENST00000524165 Q5XG85 94 aa8.93□□□□□ -0.98
PVT1-220ENST00000524165 JOSD1Q15040 202 aaPredicted RBP8.92□□□□□ -0.98
PVT1-220ENST00000524165 ATP6V1G1O75348 118 aa8.91□□□□□ -0.98
PVT1-220ENST00000524165 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
PVT1-220ENST00000524165 ST20-AS1Q8NBB2 130 aa8.91□□□□□ -0.98
PVT1-220ENST00000524165 CHTOPQ9Y3Y2 248 aaKnown RBP8.91□□□□□ -0.98
PVT1-220ENST00000524165 C9JQL5 133 aa8.89□□□□□ -0.99
PVT1-220ENST00000524165 DDTP30046 118 aa8.89□□□□□ -0.99
PVT1-220ENST00000524165 KRTAP20-1Q3LI63 56 aa8.89□□□□□ -0.99
PVT1-220ENST00000524165 SLC25A34Q6PIV7 304 aa8.89□□□□□ -0.99
PVT1-220ENST00000524165 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
PVT1-220ENST00000524165 SMIM13P0DJ93 91 aa8.88□□□□□ -0.99
PVT1-220ENST00000524165 SPRR1BP22528 89 aa8.88□□□□□ -0.99
PVT1-220ENST00000524165 TCTE3Q8IZS6 198 aa8.88□□□□□ -0.99
PVT1-220ENST00000524165 LINC01546A6NGU7 62 aa8.87□□□□□ -0.99
PVT1-220ENST00000524165 ATP11AUNQ6ZP68 121 aa8.87□□□□□ -0.99
PVT1-220ENST00000524165 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
PVT1-220ENST00000524165 H7C2G1 150 aa8.85□□□□□ -0.99
PVT1-220ENST00000524165 TRBV10-2A0A0K0K1G8 114 aa8.84□□□□□ -0.99
PVT1-220ENST00000524165 SMIM29Q86T20 159 aa8.84□□□□□ -0.99
PVT1-220ENST00000524165 LAMTOR3Q9UHA4 124 aa8.83□□□□□ -1
PVT1-220ENST00000524165 NDUFA6P56556 154 aa8.82□□□□□ -1
PVT1-220ENST00000524165 MEIG1Q5JSS6 88 aa8.82□□□□□ -1
PVT1-220ENST00000524165 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
PVT1-220ENST00000524165 C11orf86A6NJI1 115 aa8.81□□□□□ -1
PVT1-220ENST00000524165 PRO1933Q9H354 126 aa8.81□□□□□ -1
PVT1-220ENST00000524165 PEA15Q15121 130 aa8.8□□□□□ -1
PVT1-220ENST00000524165 Q75L30 129 aa8.8□□□□□ -1
PVT1-220ENST00000524165 C10orf91Q5T1B1 145 aa8.79□□□□□ -1
PVT1-220ENST00000524165 MUC12Q9UKN1 5478 aa8.79□□□□□ -1
PVT1-220ENST00000524165 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms