RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 MUC7Q8TAX7 377 aa7.49□□□□□ -1.21
HDAC9-228ENST00000524023 KLK12Q9UKR0 248 aa7.49□□□□□ -1.21
HDAC9-228ENST00000524023 IGKV3D-7A0A0C4DH55 119 aa7.49□□□□□ -1.21
HDAC9-228ENST00000524023 ENHOQ6UWT2 76 aa7.48□□□□□ -1.21
HDAC9-228ENST00000524023 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
HDAC9-228ENST00000524023 LINC00575Q6W349 94 aa7.47□□□□□ -1.21
HDAC9-228ENST00000524023 C3orf56Q8N813 242 aa7.47□□□□□ -1.21
HDAC9-228ENST00000524023 WFDC9Q8NEX5 89 aa7.47□□□□□ -1.21
HDAC9-228ENST00000524023 UQCRQO14949 82 aa7.46□□□□□ -1.21
HDAC9-228ENST00000524023 LYPD5Q6UWN5 251 aa7.46□□□□□ -1.21
HDAC9-228ENST00000524023 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-228ENST00000524023 WIPF1O43516 503 aa7.46□□□□□ -1.22
HDAC9-228ENST00000524023 ATOX1O00244 68 aa7.45□□□□□ -1.22
HDAC9-228ENST00000524023 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
HDAC9-228ENST00000524023 RPL18AQ02543 176 aaKnown RBP7.44□□□□□ -1.22
HDAC9-228ENST00000524023 C9orf153Q5TBE3 101 aa7.44□□□□□ -1.22
HDAC9-228ENST00000524023 C2orf48Q96LS8 159 aa7.44□□□□□ -1.22
HDAC9-228ENST00000524023 hADV29S1A0JD25 119 aa7.44□□□□□ -1.22
HDAC9-228ENST00000524023 COX7CP15954 63 aa7.44□□□□□ -1.22
HDAC9-228ENST00000524023 C6orf48Q9UBA6 75 aa7.44□□□□□ -1.22
HDAC9-228ENST00000524023 A0A087WVE0 104 aa7.43□□□□□ -1.22
HDAC9-228ENST00000524023 ANK2Q01484 3957 aa7.42□□□□□ -1.22
HDAC9-228ENST00000524023 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
HDAC9-228ENST00000524023 TRBV10-3A0A0K0K1G6 114 aa7.41□□□□□ -1.22
HDAC9-228ENST00000524023 ZNF561-AS1K7EIQ3 104 aa7.41□□□□□ -1.22
HDAC9-228ENST00000524023 XAGE1AQ9HD64 81 aa7.41□□□□□ -1.22
HDAC9-228ENST00000524023 RBM3P98179 157 aaKnown RBP7.4□□□□□ -1.22
HDAC9-228ENST00000524023 WFDC10BQ8IUB3 73 aa7.4□□□□□ -1.22
HDAC9-228ENST00000524023 KPRPQ5T749 579 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-228ENST00000524023 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.23
HDAC9-228ENST00000524023 Q6ZQT0 140 aa7.4□□□□□ -1.23
HDAC9-228ENST00000524023 SMIM20Q8N5G0 67 aa7.4□□□□□ -1.23
HDAC9-228ENST00000524023 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.23
HDAC9-228ENST00000524023 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 USP17L23D6RBM5 183 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 H3BNG1 76 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 Q6ZQY7 126 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 LAMTOR3Q9UHA4 124 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 LOC110117498A0A087WWA1 95 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 CRYGAP11844 174 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 HIGD2BQ4VC39 106 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 KRTAP26-1Q6PEX3 210 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 DIRC1Q969H9 104 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 RETNQ9HD89 108 aa7.39□□□□□ -1.23
HDAC9-228ENST00000524023 CAMK2N2Q96S95 79 aa7.38□□□□□ -1.23
HDAC9-228ENST00000524023 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
HDAC9-228ENST00000524023 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
HDAC9-228ENST00000524023 Q6ZTC4 211 aa7.37□□□□□ -1.23
HDAC9-228ENST00000524023 SERP2Q8N6R1 65 aa7.37□□□□□ -1.23
HDAC9-228ENST00000524023 H3BQ85 93 aa7.36□□□□□ -1.23
HDAC9-228ENST00000524023 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
HDAC9-228ENST00000524023 KRTAP10-11P60412 298 aa7.36□□□□□ -1.23
HDAC9-228ENST00000524023 VPREB1P12018 145 aa7.36□□□□□ -1.23
HDAC9-228ENST00000524023 EGFEM1PQ0D2K5 195 aa7.36□□□□□ -1.23
HDAC9-228ENST00000524023 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
HDAC9-228ENST00000524023 M0R2N4 97 aa7.35□□□□□ -1.23
HDAC9-228ENST00000524023 COX7BP24311 80 aa7.35□□□□□ -1.23
HDAC9-228ENST00000524023 Q6ZRU5 148 aa7.35□□□□□ -1.23
HDAC9-228ENST00000524023 FAM19A1Q7Z5A9 133 aa7.35□□□□□ -1.23
HDAC9-228ENST00000524023 DSCR8Q96T75 97 aa7.35□□□□□ -1.23
HDAC9-228ENST00000524023 ELOF1P60002 83 aaKnown RBP7.35□□□□□ -1.23
HDAC9-228ENST00000524023 ESRGQ1W209 222 aa7.35□□□□□ -1.23
HDAC9-228ENST00000524023 TENM3Q9P273 2699 aa7.34□□□□□ -1.23
HDAC9-228ENST00000524023 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
HDAC9-228ENST00000524023 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-228ENST00000524023 PDE6GP18545 87 aa7.33□□□□□ -1.24
HDAC9-228ENST00000524023 UPK3BQ9BT76 320 aa7.33□□□□□ -1.24
HDAC9-228ENST00000524023 DNAH3Q8TD57 4116 aa7.33□□□□□ -1.24
HDAC9-228ENST00000524023 NDUFC2-KCTD14E9PQ53 114 aa7.33□□□□□ -1.24
HDAC9-228ENST00000524023 M0R378 163 aa7.33□□□□□ -1.24
HDAC9-228ENST00000524023 CYSTM1Q9H1C7 97 aa7.33□□□□□ -1.24
HDAC9-228ENST00000524023 SVIPQ8NHG7 77 aa7.32□□□□□ -1.24
HDAC9-228ENST00000524023 C1orf43Q9BWL3 253 aa7.32□□□□□ -1.24
HDAC9-228ENST00000524023 GHRHP01286 108 aa7.31□□□□□ -1.24
HDAC9-228ENST00000524023 Q6ZVQ6 151 aa7.31□□□□□ -1.24
HDAC9-228ENST00000524023 TRBV7-4A0A0J9YYF1 115 aa7.3□□□□□ -1.24
HDAC9-228ENST00000524023 LINC01556Q5JQF7 62 aa7.3□□□□□ -1.24
HDAC9-228ENST00000524023 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-228ENST00000524023 Q6ZRP5 223 aa7.3□□□□□ -1.24
HDAC9-228ENST00000524023 IGKV2D-24A0A075B6R9 120 aa7.29□□□□□ -1.24
HDAC9-228ENST00000524023 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
HDAC9-228ENST00000524023 DEFB131BA0A096LNP1 70 aa7.29□□□□□ -1.24
HDAC9-228ENST00000524023 HAMPP81172 84 aa7.29□□□□□ -1.24
HDAC9-228ENST00000524023 F8WDY8 70 aa7.28□□□□□ -1.24
HDAC9-228ENST00000524023 SYCNQ0VAF6 134 aa7.27□□□□□ -1.24
HDAC9-228ENST00000524023 STAB1Q9NY15 2570 aa7.27□□□□□ -1.25
HDAC9-228ENST00000524023 C11orf45Q8TAV5 145 aa7.27□□□□□ -1.25
HDAC9-228ENST00000524023 DNAH1Q9P2D7 4330 aa7.26□□□□□ -1.25
HDAC9-228ENST00000524023 TMEM258P61165 79 aa7.26□□□□□ -1.25
HDAC9-228ENST00000524023 CXCL6P80162 114 aa7.26□□□□□ -1.25
HDAC9-228ENST00000524023 F8P00451 2351 aa7.25□□□□□ -1.25
HDAC9-228ENST00000524023 FBN1P35555 2871 aaKnown RBP7.25□□□□□ -1.25
HDAC9-228ENST00000524023 FLNBO75369 2602 aaKnown RBP7.24□□□□□ -1.25
HDAC9-228ENST00000524023 LOC107984640A0A0U1RRK4 108 aa7.24□□□□□ -1.25
HDAC9-228ENST00000524023 J3KT08 172 aa7.24□□□□□ -1.25
HDAC9-228ENST00000524023 BCE1O60756 84 aa7.24□□□□□ -1.25
HDAC9-228ENST00000524023 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
HDAC9-228ENST00000524023 KCNQ1DNQ9H478 68 aa7.24□□□□□ -1.25
HDAC9-228ENST00000524023 KRTAP24-1Q3LI83 254 aa7.23□□□□□ -1.25
HDAC9-228ENST00000524023 NKAPP1Q8N9T2 125 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms