RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 RPL24P83731 157 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-240ENST00000523912 PRR4Q16378 134 aa5.29□□□□□ -1.56
CTNNA1-240ENST00000523912 HSPB8Q9UJY1 196 aa5.29□□□□□ -1.56
CTNNA1-240ENST00000523912 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
CTNNA1-240ENST00000523912 PFN2P35080 140 aa5.28□□□□□ -1.56
CTNNA1-240ENST00000523912 COX17Q14061 63 aa5.28□□□□□ -1.56
CTNNA1-240ENST00000523912 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
CTNNA1-240ENST00000523912 TRAV12-1A0A0B4J245 112 aa5.27□□□□□ -1.57
CTNNA1-240ENST00000523912 ZNF22P17026 224 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-240ENST00000523912 TMEM170BQ5T4T1 132 aa5.27□□□□□ -1.57
CTNNA1-240ENST00000523912 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
CTNNA1-240ENST00000523912 IGKV2-28A0A075B6P5 120 aa5.26□□□□□ -1.57
CTNNA1-240ENST00000523912 IGKV2D-28P01615 120 aa5.26□□□□□ -1.57
CTNNA1-240ENST00000523912 FAM229BQ4G0N7 80 aa5.26□□□□□ -1.57
CTNNA1-240ENST00000523912 SND1-IT1Q9HBX3 110 aa5.26□□□□□ -1.57
CTNNA1-240ENST00000523912 A0A0U1RQV1 116 aa5.25□□□□□ -1.57
CTNNA1-240ENST00000523912 TSPAN13O95857 204 aa5.25□□□□□ -1.57
CTNNA1-240ENST00000523912 FABP4P15090 132 aa5.25□□□□□ -1.57
CTNNA1-240ENST00000523912 CHTOPQ9Y3Y2 248 aaKnown RBP5.25□□□□□ -1.57
CTNNA1-240ENST00000523912 LPAP08519 4548 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 A0A087X002 238 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 IGKV2D-26A0A0A0MRZ7 120 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 C11orf86A6NJI1 115 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 H0Y8G0 127 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 S100A6P06703 90 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 VPREB1P12018 145 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 PLNP26678 52 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 FAM19A1Q7Z5A9 133 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 KRTAP13-1Q8IUC0 172 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 ZNF625Q96I27 306 aaPredicted RBP5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 MAP1LC3CQ9BXW4 147 aa5.24□□□□□ -1.57
CTNNA1-240ENST00000523912 LINC00158P58513 81 aa5.23□□□□□ -1.57
CTNNA1-240ENST00000523912 PRLHP81277 87 aa5.23□□□□□ -1.57
CTNNA1-240ENST00000523912 TMEM126AQ9H061 195 aa5.23□□□□□ -1.57
CTNNA1-240ENST00000523912 TMEM238C9JI98 176 aa5.22□□□□□ -1.57
CTNNA1-240ENST00000523912 SYS1-DBNDD2H3BUS1 97 aa5.22□□□□□ -1.57
CTNNA1-240ENST00000523912 S100A2P29034 98 aa5.22□□□□□ -1.57
CTNNA1-240ENST00000523912 HIST3H2BBQ8N257 126 aa5.22□□□□□ -1.57
CTNNA1-240ENST00000523912 LINC00304Q8N9R0 145 aa5.22□□□□□ -1.57
CTNNA1-240ENST00000523912 LINC00587B1AMM8 73 aa5.21□□□□□ -1.58
CTNNA1-240ENST00000523912 DPM2O94777 84 aa5.21□□□□□ -1.58
CTNNA1-240ENST00000523912 MEIG1Q5JSS6 88 aa5.21□□□□□ -1.58
CTNNA1-240ENST00000523912 ANAPC11Q9NYG5 84 aa5.21□□□□□ -1.58
CTNNA1-240ENST00000523912 ZNF706Q9Y5V0 76 aaPredicted RBP5.21□□□□□ -1.58
CTNNA1-240ENST00000523912 TMEM223A0PJW6 202 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 M0R378 163 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 IGKCP01834 107 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 C3orf79P0CE67 100 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 KRTDAPP60985 99 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 HERV-K104P63124 156 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 S100A12P80511 92 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 LINC01545Q5VT33 79 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 PET117Q6UWS5 81 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 HIST1H2BLQ99880 126 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 HIGD2AQ9BW72 106 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
CTNNA1-240ENST00000523912 A0A0U1RRA0 63 aa5.19□□□□□ -1.58
CTNNA1-240ENST00000523912 C20orf202A1L168 122 aa5.19□□□□□ -1.58
CTNNA1-240ENST00000523912 SNRPEP62304 92 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-240ENST00000523912 CTAG1AP78358 180 aa5.19□□□□□ -1.58
CTNNA1-240ENST00000523912 PMCHL2Q9BQD1 86 aa5.19□□□□□ -1.58
CTNNA1-240ENST00000523912 MYMXA0A1B0GTQ4 84 aa5.18□□□□□ -1.58
CTNNA1-240ENST00000523912 C5orf52A6NGY3 159 aa5.18□□□□□ -1.58
CTNNA1-240ENST00000523912 PRYO14603 147 aa5.18□□□□□ -1.58
CTNNA1-240ENST00000523912 HERVK_113P61574 105 aa5.18□□□□□ -1.58
CTNNA1-240ENST00000523912 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
CTNNA1-240ENST00000523912 BOD1L2Q8IYS8 172 aa5.18□□□□□ -1.58
CTNNA1-240ENST00000523912 SMIM13P0DJ93 91 aa5.17□□□□□ -1.58
CTNNA1-240ENST00000523912 AKR1D1P51857 326 aa5.17□□□□□ -1.58
CTNNA1-240ENST00000523912 PLEKHB2Q96CS7 222 aa5.17□□□□□ -1.58
CTNNA1-240ENST00000523912 NDUFA12Q9UI09 145 aa5.17□□□□□ -1.58
CTNNA1-240ENST00000523912 ETDCA0A1B0GVM5 59 aa5.16□□□□□ -1.58
CTNNA1-240ENST00000523912 NCR3O14931 201 aa5.16□□□□□ -1.58
CTNNA1-240ENST00000523912 C4orf48Q5BLP8 95 aa5.16□□□□□ -1.58
CTNNA1-240ENST00000523912 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
CTNNA1-240ENST00000523912 MIR7-3HGQ8N6C7 128 aa5.16□□□□□ -1.58
CTNNA1-240ENST00000523912 Q8NDZ9 215 aa5.16□□□□□ -1.58
CTNNA1-240ENST00000523912 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-240ENST00000523912 E9PLD3 99 aa5.15□□□□□ -1.59
CTNNA1-240ENST00000523912 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
CTNNA1-240ENST00000523912 LINC00337Q8N6G1 96 aa5.15□□□□□ -1.59
CTNNA1-240ENST00000523912 SPRR4Q96PI1 79 aa5.15□□□□□ -1.59
CTNNA1-240ENST00000523912 RETNLBQ9BQ08 111 aa5.15□□□□□ -1.59
CTNNA1-240ENST00000523912 MIEN1Q9BRT3 115 aa5.15□□□□□ -1.59
CTNNA1-240ENST00000523912 MUC2Q02817 5179 aa5.15□□□□□ -1.59
CTNNA1-240ENST00000523912 IGLV7-46A0A075B6I9 117 aa5.14□□□□□ -1.59
CTNNA1-240ENST00000523912 J3QQQ9 107 aa5.14□□□□□ -1.59
CTNNA1-240ENST00000523912 LEPROTO15243 131 aa5.14□□□□□ -1.59
CTNNA1-240ENST00000523912 CDIP1Q9H305 208 aa5.14□□□□□ -1.59
CTNNA1-240ENST00000523912 KCNQ1DNQ9H478 68 aa5.14□□□□□ -1.59
CTNNA1-240ENST00000523912 LGALS3P17931 250 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-240ENST00000523912 NMUP48645 174 aa5.13□□□□□ -1.59
CTNNA1-240ENST00000523912 TSPEAR-AS2P59090 65 aa5.13□□□□□ -1.59
CTNNA1-240ENST00000523912 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
CTNNA1-240ENST00000523912 C3orf22Q8N5N4 141 aa5.13□□□□□ -1.59
CTNNA1-240ENST00000523912 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
CTNNA1-240ENST00000523912 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
CTNNA1-240ENST00000523912 SPRR1AP35321 89 aa5.12□□□□□ -1.59
CTNNA1-240ENST00000523912 ATOH7Q8N100 152 aa5.12□□□□□ -1.59
CTNNA1-240ENST00000523912 SPANXB1Q9NS25 103 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms