RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 KALRNO60229 2985 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 MYO18BQ8IUG5 2567 aa4.24□□□□□ -1.73
SDC2-208ENST00000523877 DNAJC13O75165 2243 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 ETDCA0A1B0GVM5 59 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 NUPR2A6NF83 97 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 UQCR11O14957 56 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 NDUFA1O15239 70 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 IGHV3-53P01767 116 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 SPINK7P58062 85 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 DAZAP2Q15038 168 aaPredicted RBP4.23□□□□□ -1.73
SDC2-208ENST00000523877 ZGRF1Q86YA3 2104 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 C15orf56Q8N910 161 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 DEFB126Q9BYW3 111 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 TEX15Q9BXT5 2789 aa4.23□□□□□ -1.73
SDC2-208ENST00000523877 SVILO95425 2214 aa4.22□□□□□ -1.73
SDC2-208ENST00000523877 FREM1Q5H8C1 2179 aa4.22□□□□□ -1.73
SDC2-208ENST00000523877 PRAC2D3DTV9 90 aa4.22□□□□□ -1.73
SDC2-208ENST00000523877 INSP01308 110 aa4.22□□□□□ -1.73
SDC2-208ENST00000523877 CCL18P55774 89 aa4.22□□□□□ -1.73
SDC2-208ENST00000523877 C10orf25Q5T742 122 aa4.22□□□□□ -1.73
SDC2-208ENST00000523877 PRR34Q9NV39 138 aa4.22□□□□□ -1.73
SDC2-208ENST00000523877 DIDO1Q9BTC0 2240 aaKnown RBP4.22□□□□□ -1.73
SDC2-208ENST00000523877 SPTA1P02549 2419 aa4.21□□□□□ -1.74
SDC2-208ENST00000523877 FBN3Q75N90 2809 aa4.21□□□□□ -1.74
SDC2-208ENST00000523877 A8MUU9 505 aa4.21□□□□□ -1.74
SDC2-208ENST00000523877 DEFB112Q30KQ8 113 aa4.21□□□□□ -1.74
SDC2-208ENST00000523877 Q8NBF4 154 aa4.21□□□□□ -1.74
SDC2-208ENST00000523877 ZNRD1Q9P1U0 126 aa4.21□□□□□ -1.74
SDC2-208ENST00000523877 RELNP78509 3460 aa4.2□□□□□ -1.74
SDC2-208ENST00000523877 TRGV4A0A0C4DH28 118 aa4.2□□□□□ -1.74
SDC2-208ENST00000523877 LYZP61626 148 aa4.2□□□□□ -1.74
SDC2-208ENST00000523877 PIGYQ3MUY2 71 aa4.2□□□□□ -1.74
SDC2-208ENST00000523877 C9orf129Q5T035 196 aaKnown RBP4.2□□□□□ -1.74
SDC2-208ENST00000523877 COA5Q86WW8 74 aa4.2□□□□□ -1.74
SDC2-208ENST00000523877 SDK2Q58EX2 2172 aa4.2□□□□□ -1.74
SDC2-208ENST00000523877 CFAP46Q8IYW2 2715 aa4.2□□□□□ -1.74
SDC2-208ENST00000523877 FBN2P35556 2912 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 A0A087WYN8 130 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 IGKV2-29A2NJV5 120 aaPredicted RBP4.19□□□□□ -1.74
SDC2-208ENST00000523877 IGKV3-15P01624 115 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 IGKV4-1P06312 121 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 KRTAP26-1Q6PEX3 210 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 DOCK10Q96BY6 2186 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 SHANK1Q9Y566 2161 aa4.19□□□□□ -1.74
SDC2-208ENST00000523877 CR1P17927 2039 aa4.18□□□□□ -1.74
SDC2-208ENST00000523877 IGHV3-64A0A075B6Q5 118 aa4.18□□□□□ -1.74
SDC2-208ENST00000523877 PRB1P04280 392 aa4.18□□□□□ -1.74
SDC2-208ENST00000523877 CRIP1P50238 77 aa4.18□□□□□ -1.74
SDC2-208ENST00000523877 SPINK9Q5DT21 86 aa4.18□□□□□ -1.74
SDC2-208ENST00000523877 KCNQ1DNQ9H478 68 aa4.18□□□□□ -1.74
SDC2-208ENST00000523877 AKAP13Q12802 2813 aa4.17□□□□□ -1.74
SDC2-208ENST00000523877 CCL3L1P16619 93 aa4.17□□□□□ -1.74
SDC2-208ENST00000523877 Q6YL49 198 aa4.17□□□□□ -1.74
SDC2-208ENST00000523877 DOPEY1Q5JWR5 2465 aa4.17□□□□□ -1.74
SDC2-208ENST00000523877 PIEZO2Q9H5I5 2752 aa4.17□□□□□ -1.74
SDC2-208ENST00000523877 PANO1I0J062 215 aa4.16□□□□□ -1.74
SDC2-208ENST00000523877 IGKV3-20P01619 116 aa4.16□□□□□ -1.74
SDC2-208ENST00000523877 MINOS1-NBL1R4GNA1 71 aa4.16□□□□□ -1.74
SDC2-208ENST00000523877 ZFHX3Q15911 3703 aa4.16□□□□□ -1.74
SDC2-208ENST00000523877 CELSR3Q9NYQ7 3312 aa4.15□□□□□ -1.74
SDC2-208ENST00000523877 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.75
SDC2-208ENST00000523877 RNASE3P12724 160 aaKnown RBP4.15□□□□□ -1.75
SDC2-208ENST00000523877 SPRR4Q96PI1 79 aa4.15□□□□□ -1.75
SDC2-208ENST00000523877 UBR5O95071 2799 aaPredicted RBP4.15□□□□□ -1.75
SDC2-208ENST00000523877 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 IGLV4-60A0A075B6I1 120 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 IGLV7-46A0A075B6I9 117 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 GAS8-AS1O95177 125 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 PRCDQ00LT1 54 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 SMIM11BQ8TCY0 68 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 ABCA12Q86UK0 2595 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 COL4A2P08572 1712 aa4.14□□□□□ -1.75
SDC2-208ENST00000523877 MALRD1Q5VYJ5 2156 aa4.13□□□□□ -1.75
SDC2-208ENST00000523877 Q6ZTI0 123 aa4.13□□□□□ -1.75
SDC2-208ENST00000523877 C2CD3Q4AC94 2353 aa4.12□□□□□ -1.75
SDC2-208ENST00000523877 SPTAN1Q13813 2472 aaKnown RBP4.12□□□□□ -1.75
SDC2-208ENST00000523877 CACNA1DQ01668 2161 aa4.12□□□□□ -1.75
SDC2-208ENST00000523877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.12□□□□□ -1.75
SDC2-208ENST00000523877 CACNA1IQ9P0X4 2223 aa4.11□□□□□ -1.75
SDC2-208ENST00000523877 ZNF861PO60384 105 aa4.11□□□□□ -1.75
SDC2-208ENST00000523877 MRPS21P82921 87 aaKnown RBP4.11□□□□□ -1.75
SDC2-208ENST00000523877 COX17Q14061 63 aa4.11□□□□□ -1.75
SDC2-208ENST00000523877 Q5W150 140 aa4.11□□□□□ -1.75
SDC2-208ENST00000523877 COL12A1Q99715 3063 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 PRR14LQ5THK1 2151 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 TNCP24821 2201 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 IGLV7-43P04211 117 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 C16orf74Q96GX8 76 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 ADAMTS9Q9P2N4 1935 aa4.1□□□□□ -1.75
SDC2-208ENST00000523877 LAMA1P25391 3075 aa4.08□□□□□ -1.76
SDC2-208ENST00000523877 IGKV3OR2-268A0A0C4DH90 116 aa4.08□□□□□ -1.76
SDC2-208ENST00000523877 MRPL33O75394 65 aaKnown RBP4.08□□□□□ -1.76
SDC2-208ENST00000523877 COX7BP24311 80 aa4.08□□□□□ -1.76
SDC2-208ENST00000523877 POLR2KP53803 58 aaKnown RBP4.08□□□□□ -1.76
SDC2-208ENST00000523877 ITPR3Q14573 2671 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms