RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CIRBPQ14011 172 aaKnown RBP7.57□□□□□ -1.2
PVT1-215ENST00000522963 C9orf129Q5T035 196 aaKnown RBP7.57□□□□□ -1.2
PVT1-215ENST00000522963 Q5VSD8 79 aa7.57□□□□□ -1.2
PVT1-215ENST00000522963 SLC25A34Q6PIV7 304 aa7.57□□□□□ -1.2
PVT1-215ENST00000522963 SPACA4Q8TDM5 124 aa7.57□□□□□ -1.2
PVT1-215ENST00000522963 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
PVT1-215ENST00000522963 HSPG2P98160 4391 aa7.56□□□□□ -1.2
PVT1-215ENST00000522963 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
PVT1-215ENST00000522963 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
PVT1-215ENST00000522963 C12orf57Q99622 126 aa7.56□□□□□ -1.2
PVT1-215ENST00000522963 LINC00474Q9P2X8 69 aa7.56□□□□□ -1.2
PVT1-215ENST00000522963 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
PVT1-215ENST00000522963 A0A1W2PNN7 141 aa7.54□□□□□ -1.2
PVT1-215ENST00000522963 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
PVT1-215ENST00000522963 TMEM238C9JI98 176 aa7.54□□□□□ -1.2
PVT1-215ENST00000522963 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
PVT1-215ENST00000522963 LINC00518Q8N0U6 118 aa7.54□□□□□ -1.2
PVT1-215ENST00000522963 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
PVT1-215ENST00000522963 PRO1933Q9H354 126 aa7.54□□□□□ -1.2
PVT1-215ENST00000522963 A0A087WYN8 130 aa7.53□□□□□ -1.2
PVT1-215ENST00000522963 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
PVT1-215ENST00000522963 NPC2P61916 151 aa7.53□□□□□ -1.2
PVT1-215ENST00000522963 C2orf91Q6ZV80 131 aa7.53□□□□□ -1.2
PVT1-215ENST00000522963 KRTAP7-1Q8IUC3 87 aa7.53□□□□□ -1.2
PVT1-215ENST00000522963 SPANXDQ9BXN6 97 aa7.53□□□□□ -1.2
PVT1-215ENST00000522963 SPANXCQ9NY87 97 aa7.53□□□□□ -1.2
PVT1-215ENST00000522963 LOC107984156A0A0G2JMH3 177 aa7.52□□□□□ -1.21
PVT1-215ENST00000522963 SERTAD4-AS1Q5TG53 156 aa7.52□□□□□ -1.21
PVT1-215ENST00000522963 ARL17AQ8IVW1 177 aa7.52□□□□□ -1.21
PVT1-215ENST00000522963 Q8NDZ9 215 aa7.52□□□□□ -1.21
PVT1-215ENST00000522963 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
PVT1-215ENST00000522963 SPANXB1Q9NS25 103 aaPredicted RBP7.52□□□□□ -1.21
PVT1-215ENST00000522963 UQCR10Q9UDW1 63 aa7.52□□□□□ -1.21
PVT1-215ENST00000522963 FAM19A5Q7Z5A7 132 aaPredicted RBP7.51□□□□□ -1.21
PVT1-215ENST00000522963 PLAC8Q9NZF1 115 aa7.51□□□□□ -1.21
PVT1-215ENST00000522963 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
PVT1-215ENST00000522963 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
PVT1-215ENST00000522963 VPREB1P12018 145 aa7.5□□□□□ -1.21
PVT1-215ENST00000522963 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.214e-6■■■■□ 20.8
PVT1-215ENST00000522963 Q6ZVH6 145 aa7.5□□□□□ -1.21
PVT1-215ENST00000522963 MUSTN1Q8IVN3 82 aa7.5□□□□□ -1.21
PVT1-215ENST00000522963 PLA2G1BP04054 148 aaKnown RBP7.49□□□□□ -1.21
PVT1-215ENST00000522963 INAFM2P0DMQ5 153 aa7.49□□□□□ -1.21
PVT1-215ENST00000522963 IFITM1P13164 125 aa7.49□□□□□ -1.21
PVT1-215ENST00000522963 MIEN1Q9BRT3 115 aa7.49□□□□□ -1.21
PVT1-215ENST00000522963 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
PVT1-215ENST00000522963 HIST1H4GQ99525 98 aa7.48□□□□□ -1.21
PVT1-215ENST00000522963 C22orf24Q9Y442 160 aa7.48□□□□□ -1.21
PVT1-215ENST00000522963 M0QXV9 152 aa7.47□□□□□ -1.21
PVT1-215ENST00000522963 PRR3P79522 188 aaKnown RBP7.47□□□□□ -1.21
PVT1-215ENST00000522963 RPL24P83731 157 aaKnown RBP7.47□□□□□ -1.21
PVT1-215ENST00000522963 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
PVT1-215ENST00000522963 PPDPFQ9H3Y8 114 aa7.47□□□□□ -1.21
PVT1-215ENST00000522963 NCR3O14931 201 aa7.46□□□□□ -1.22
PVT1-215ENST00000522963 NDUFC2O95298 119 aa7.46□□□□□ -1.22
PVT1-215ENST00000522963 HNRNPA3P51991 378 aaKnown RBP7.46□□□□□ -1.22
PVT1-215ENST00000522963 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
PVT1-215ENST00000522963 NKAPP1Q8N9T2 125 aa7.46□□□□□ -1.22
PVT1-215ENST00000522963 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
PVT1-215ENST00000522963 TSTD3H0UI37 97 aa7.45□□□□□ -1.22
PVT1-215ENST00000522963 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
PVT1-215ENST00000522963 GAGE10A6NGK3 116 aa7.44□□□□□ -1.22
PVT1-215ENST00000522963 TAL2Q16559 108 aa7.44□□□□□ -1.22
PVT1-215ENST00000522963 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
PVT1-215ENST00000522963 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
PVT1-215ENST00000522963 IGKV2-28A0A075B6P5 120 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 TRBV10-2A0A0K0K1G8 114 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 A4D1N5 150 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 M0R378 163 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 IGKV2D-28P01615 120 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 HSD52Q0P140 79 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
PVT1-215ENST00000522963 CEND1Q8N111 149 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 LINC00167Q96N53 147 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 ABCA13Q86UQ4 5058 aa7.43□□□□□ -1.22
PVT1-215ENST00000522963 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
PVT1-215ENST00000522963 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
PVT1-215ENST00000522963 CTAG1AP78358 180 aa7.41□□□□□ -1.22
PVT1-215ENST00000522963 FAT1Q14517 4588 aa7.4□□□□□ -1.22
PVT1-215ENST00000522963 FXYD2P54710 66 aa7.4□□□□□ -1.22
PVT1-215ENST00000522963 UBE2BP63146 152 aa7.4□□□□□ -1.22
PVT1-215ENST00000522963 LINC00337Q8N6G1 96 aa7.4□□□□□ -1.22
PVT1-215ENST00000522963 IGLV1-50A0A075B6I6 118 aa7.39□□□□□ -1.23
PVT1-215ENST00000522963 TRBV10-3A0A0K0K1G6 114 aa7.39□□□□□ -1.23
PVT1-215ENST00000522963 VPS13BQ7Z7G8 4022 aa7.38□□□□□ -1.23
PVT1-215ENST00000522963 IGLV6-57P01721 117 aa7.38□□□□□ -1.23
PVT1-215ENST00000522963 DDTP30046 118 aa7.38□□□□□ -1.23
PVT1-215ENST00000522963 KRTAP10-4P60372 401 aaPredicted RBP7.38□□□□□ -1.23
PVT1-215ENST00000522963 S100A7L2Q5SY68 101 aa7.38□□□□□ -1.23
PVT1-215ENST00000522963 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
PVT1-215ENST00000522963 SRRM2Q9UQ35 2752 aaKnown RBP7.38□□□□□ -1.23
PVT1-215ENST00000522963 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
PVT1-215ENST00000522963 CFC1P0CG37 223 aa7.37□□□□□ -1.23
PVT1-215ENST00000522963 BVES-AS1Q5T3Y7 98 aa7.37□□□□□ -1.23
PVT1-215ENST00000522963 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
PVT1-215ENST00000522963 TRAV13-2A0A0B4J235 113 aa7.36□□□□□ -1.23
PVT1-215ENST00000522963 TMEM238LA0A1B0GVL6 79 aa7.36□□□□□ -1.23
PVT1-215ENST00000522963 A6NDN8 102 aa7.36□□□□□ -1.23
PVT1-215ENST00000522963 A6NJY4 79 aa7.36□□□□□ -1.23
PVT1-215ENST00000522963 TMEM126AQ9H061 195 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms