RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SPINK6Q6UWN8 80 aa4.06□□□□□ -1.76
SDCBP-210ENST00000522843 STPG4Q8N801 248 aa4.06□□□□□ -1.76
SDCBP-210ENST00000522843 VAMP8Q9BV40 100 aa4.06□□□□□ -1.76
SDCBP-210ENST00000522843 MRPL35Q9NZE8 188 aaKnown RBP4.06□□□□□ -1.76
SDCBP-210ENST00000522843 CHTOPQ9Y3Y2 248 aaKnown RBP4.06□□□□□ -1.76
SDCBP-210ENST00000522843 TINCRA0A1B0GVN0 87 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 F8WDY8 70 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 UBE2D1P51668 147 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 SEC11AP67812 179 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 OPRPNQ99935 248 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-210ENST00000522843 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
SDCBP-210ENST00000522843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-210ENST00000522843 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-210ENST00000522843 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 E9PLD3 99 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 TSTD3H0UI37 97 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 COX8AP10176 69 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 CNBPP62633 177 aaKnown RBP4.04□□□□□ -1.76
SDCBP-210ENST00000522843 SPATA45Q537H7 98 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 LINC01561Q8N1V8 128 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 OR5A1Q8NGJ0 315 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 C7orf33Q8WU49 177 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 TMEM101Q96IK0 257 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 PMCHL2Q9BQD1 86 aa4.04□□□□□ -1.76
SDCBP-210ENST00000522843 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 UBE2L6O14933 153 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 RBX1P62877 108 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 MAJINQ3KP22 176 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 LINC00242Q5T6M2 205 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 ZC2HC1BQ5TFG8 222 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 BOD1L2Q8IYS8 172 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 C2orf88Q9BSF0 95 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 UQCR10Q9UDW1 63 aa4.03□□□□□ -1.76
SDCBP-210ENST00000522843 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 A0A087WZ39 114 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 TMEM223A0PJW6 202 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 H0Y8G0 127 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 LINC01547P58512 204 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-210ENST00000522843 HERVK_113P63121 156 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 HERV-K104P63124 156 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 AMMECR1LQ6DCA0 310 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 Q6ZUT4 128 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 ATOH7Q8N100 152 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 DPH3Q96FX2 82 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 CHCHD5Q9BSY4 110 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 PRR34Q9NV39 138 aa4.02□□□□□ -1.77
SDCBP-210ENST00000522843 IGHV3-64A0A075B6Q5 118 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 IGHV3OR16-9A0A0B4J2B5 98 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 LINC00959A0A1B0GUT2 108 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 ZNF22P17026 224 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-210ENST00000522843 DDTP30046 118 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 MPV17L2Q567V2 206 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 SLC25A34Q6PIV7 304 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 PRO1933Q9H354 126 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 HIGD1BQ9P298 99 aa4.01□□□□□ -1.77
SDCBP-210ENST00000522843 IGKV2D-26A0A0A0MRZ7 120 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 TRAV8-4A0A0B4J246 113 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 IGHV1-58A0A0C4DH39 117 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 TMEM262E9PQX1 116 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 H3BRM9 83 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 LEPROTO15243 131 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 HERVK_113P61574 105 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 COX6A2Q02221 97 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 PRR4Q16378 134 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 PLEKHB2Q96CS7 222 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 C14orf144Q96I85 54 aa4□□□□□ -1.77
SDCBP-210ENST00000522843 CRPP02741 224 aa3.99□□□□□ -1.77
SDCBP-210ENST00000522843 NMUP48645 174 aa3.99□□□□□ -1.77
SDCBP-210ENST00000522843 SS18Q15532 418 aa3.99□□□□□ -1.77
SDCBP-210ENST00000522843 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
SDCBP-210ENST00000522843 Q6ZVQ6 151 aa3.99□□□□□ -1.77
SDCBP-210ENST00000522843 PCP2Q8IVA1 136 aa3.99□□□□□ -1.77
SDCBP-210ENST00000522843 GEMIN7Q9H840 131 aaKnown RBP3.99□□□□□ -1.77
SDCBP-210ENST00000522843 CDKN2A-AS1Q9UH64 79 aa3.99□□□□□ -1.77
SDCBP-210ENST00000522843 TRAV13-1A0A0B4J241 112 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 IGKV2-24A0A0C4DH68 120 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 MYMXA0A1B0GTQ4 84 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 J3QQQ9 107 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 REG3AQ06141 175 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 TAL2Q16559 108 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 MIAQ16674 131 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 RNASE13Q5GAN3 156 aaKnown RBP3.98□□□□□ -1.77
SDCBP-210ENST00000522843 CLPSL2Q6UWE3 100 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 C2orf91Q6ZV80 131 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 LINC00269Q8N2A0 174 aa3.98□□□□□ -1.77
SDCBP-210ENST00000522843 A0A0U1RRA0 63 aa3.97□□□□□ -1.77
SDCBP-210ENST00000522843 LINC00587B1AMM8 73 aa3.97□□□□□ -1.77
SDCBP-210ENST00000522843 ANGP03950 147 aaKnown RBP3.97□□□□□ -1.77
SDCBP-210ENST00000522843 SFTA2Q6UW10 78 aa3.97□□□□□ -1.77
SDCBP-210ENST00000522843 LINC00469Q8N7U9 141 aa3.97□□□□□ -1.77
SDCBP-210ENST00000522843 PPDPFQ9H3Y8 114 aa3.97□□□□□ -1.77
SDCBP-210ENST00000522843 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
SDCBP-210ENST00000522843 A0A096LNI7 61 aa3.96□□□□□ -1.78
SDCBP-210ENST00000522843 A0A0J9YXY3 114 aa3.96□□□□□ -1.78
SDCBP-210ENST00000522843 PCP4L1A6NKN8 68 aa3.96□□□□□ -1.78
SDCBP-210ENST00000522843 TIMM17BO60830 172 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms