RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 LBHQ53QV2 105 aaPredicted RBP10.8□□□□□ -0.68
CLK4-211ENST00000522556 H0Y9J4 135 aa10.79□□□□□ -0.68
CLK4-211ENST00000522556 PLNP26678 52 aa10.79□□□□□ -0.68
CLK4-211ENST00000522556 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
CLK4-211ENST00000522556 COX17Q14061 63 aa10.79□□□□□ -0.68
CLK4-211ENST00000522556 NKAPP1Q8N9T2 125 aa10.79□□□□□ -0.68
CLK4-211ENST00000522556 NDUFA12Q9UI09 145 aa10.79□□□□□ -0.68
CLK4-211ENST00000522556 IGKCP01834 107 aa10.78□□□□□ -0.68
CLK4-211ENST00000522556 SFTA2Q6UW10 78 aa10.78□□□□□ -0.68
CLK4-211ENST00000522556 DIRC1Q969H9 104 aa10.78□□□□□ -0.68
CLK4-211ENST00000522556 MAP1LC3CQ9BXW4 147 aa10.78□□□□□ -0.68
CLK4-211ENST00000522556 IGKV2-28A0A075B6P5 120 aa10.77□□□□□ -0.69
CLK4-211ENST00000522556 SYS1-DBNDD2H3BUS1 97 aa10.77□□□□□ -0.69
CLK4-211ENST00000522556 LEPROTO15243 131 aa10.77□□□□□ -0.69
CLK4-211ENST00000522556 IGKV2D-28P01615 120 aa10.77□□□□□ -0.69
CLK4-211ENST00000522556 ATP6V1G1O75348 118 aa10.76□□□□□ -0.69
CLK4-211ENST00000522556 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
CLK4-211ENST00000522556 MEIG1Q5JSS6 88 aa10.76□□□□□ -0.69
CLK4-211ENST00000522556 COA6Q5JTJ3 125 aaKnown RBP10.75□□□□□ -0.69
CLK4-211ENST00000522556 MIR7-3HGQ8N6C7 128 aa10.75□□□□□ -0.69
CLK4-211ENST00000522556 J3QQQ9 107 aa10.74□□□□□ -0.69
CLK4-211ENST00000522556 ZNF861PO60384 105 aa10.74□□□□□ -0.69
CLK4-211ENST00000522556 BCE1O60756 84 aa10.74□□□□□ -0.69
CLK4-211ENST00000522556 PRR26Q8N8Z3 221 aa10.74□□□□□ -0.69
CLK4-211ENST00000522556 TMEM238C9JI98 176 aa10.73□□□□□ -0.69
CLK4-211ENST00000522556 DAND5Q8N907 189 aa10.73□□□□□ -0.69
CLK4-211ENST00000522556 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
CLK4-211ENST00000522556 HMCN2Q8NDA2 5059 aa10.72□□□□□ -0.69
CLK4-211ENST00000522556 MYMXA0A1B0GTQ4 84 aa10.72□□□□□ -0.69
CLK4-211ENST00000522556 C3orf79P0CE67 100 aa10.72□□□□□ -0.69
CLK4-211ENST00000522556 HERV-K104P63124 156 aa10.72□□□□□ -0.69
CLK4-211ENST00000522556 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
CLK4-211ENST00000522556 IGLV1-50A0A075B6I6 118 aa10.71□□□□□ -0.69
CLK4-211ENST00000522556 HERVK_113P61574 105 aa10.71□□□□□ -0.69
CLK4-211ENST00000522556 KRTAP13-1Q8IUC0 172 aa10.7□□□□□ -0.7
CLK4-211ENST00000522556 NCR3O14931 201 aa10.69□□□□□ -0.7
CLK4-211ENST00000522556 LGALS3P17931 250 aaKnown RBP10.69□□□□□ -0.7
CLK4-211ENST00000522556 RPL24P83731 157 aaKnown RBP10.69□□□□□ -0.7
CLK4-211ENST00000522556 BOD1L2Q8IYS8 172 aa10.69□□□□□ -0.7
CLK4-211ENST00000522556 E9PLD3 99 aa10.68□□□□□ -0.7
CLK4-211ENST00000522556 PRLHP81277 87 aa10.68□□□□□ -0.7
CLK4-211ENST00000522556 TMEM126AQ9H061 195 aa10.68□□□□□ -0.7
CLK4-211ENST00000522556 M0R378 163 aa10.67□□□□□ -0.7
CLK4-211ENST00000522556 S100A1P23297 94 aa10.67□□□□□ -0.7
CLK4-211ENST00000522556 KRTDAPP60985 99 aa10.67□□□□□ -0.7
CLK4-211ENST00000522556 PET117Q6UWS5 81 aa10.67□□□□□ -0.7
CLK4-211ENST00000522556 IGKV2D-26A0A0A0MRZ7 120 aa10.66□□□□□ -0.7
CLK4-211ENST00000522556 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
CLK4-211ENST00000522556 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
CLK4-211ENST00000522556 TTTY13Q9BZ97 58 aa10.66□□□□□ -0.7
CLK4-211ENST00000522556 UBE2AP49459 152 aa10.65□□□□□ -0.7
CLK4-211ENST00000522556 A0A0J9YXY3 114 aa10.64□□□□□ -0.71
CLK4-211ENST00000522556 NMUP48645 174 aa10.64□□□□□ -0.71
CLK4-211ENST00000522556 ADAMTSL4-AS1Q5T5F5 129 aa10.64□□□□□ -0.71
CLK4-211ENST00000522556 SOSTDC1Q6X4U4 206 aa10.64□□□□□ -0.71
CLK4-211ENST00000522556 FAM19A1Q7Z5A9 133 aa10.64□□□□□ -0.71
CLK4-211ENST00000522556 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
CLK4-211ENST00000522556 NPC2P61916 151 aa10.63□□□□□ -0.71
CLK4-211ENST00000522556 A0A087X002 238 aa10.62□□□□□ -0.71
CLK4-211ENST00000522556 LINC00587B1AMM8 73 aa10.61□□□□□ -0.71
CLK4-211ENST00000522556 ATOH7Q8N100 152 aa10.61□□□□□ -0.71
CLK4-211ENST00000522556 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
CLK4-211ENST00000522556 LITAFQ99732 161 aa10.6□□□□□ -0.71
CLK4-211ENST00000522556 LOC107984156A0A0G2JMH3 177 aa10.59□□□□□ -0.71
CLK4-211ENST00000522556 ANKRD39Q53RE8 183 aa10.59□□□□□ -0.71
CLK4-211ENST00000522556 ARL17AQ8IVW1 177 aa10.59□□□□□ -0.71
CLK4-211ENST00000522556 HIST3H2BBQ8N257 126 aa10.59□□□□□ -0.71
CLK4-211ENST00000522556 ZNF815PA8K554 130 aa10.56□□□□□ -0.72
CLK4-211ENST00000522556 PRYO14603 147 aa10.56□□□□□ -0.72
CLK4-211ENST00000522556 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
CLK4-211ENST00000522556 SPRR1AP35321 89 aa10.55□□□□□ -0.72
CLK4-211ENST00000522556 HIGD2AQ9BW72 106 aa10.55□□□□□ -0.72
CLK4-211ENST00000522556 KCNQ1DNQ9H478 68 aa10.55□□□□□ -0.72
CLK4-211ENST00000522556 KRTAP4-16G5E9R7 235 aaPredicted RBP10.54□□□□□ -0.72
CLK4-211ENST00000522556 KRTAP13-2Q52LG2 175 aa10.54□□□□□ -0.72
CLK4-211ENST00000522556 MIEN1Q9BRT3 115 aa10.54□□□□□ -0.72
CLK4-211ENST00000522556 C20orf202A1L168 122 aa10.53□□□□□ -0.72
CLK4-211ENST00000522556 DDTP30046 118 aa10.52□□□□□ -0.73
CLK4-211ENST00000522556 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
CLK4-211ENST00000522556 SPANXB1Q9NS25 103 aaPredicted RBP10.52□□□□□ -0.73
CLK4-211ENST00000522556 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
CLK4-211ENST00000522556 LINC00308Q8TCZ7 52 aa10.51□□□□□ -0.73
CLK4-211ENST00000522556 NDUFC2O95298 119 aa10.5□□□□□ -0.73
CLK4-211ENST00000522556 PCP2Q8IVA1 136 aa10.5□□□□□ -0.73
CLK4-211ENST00000522556 LINC00337Q8N6G1 96 aa10.5□□□□□ -0.73
CLK4-211ENST00000522556 TIMM17BO60830 172 aa10.49□□□□□ -0.73
CLK4-211ENST00000522556 CRYGAP11844 174 aa10.49□□□□□ -0.73
CLK4-211ENST00000522556 IGLV6-57P01721 117 aa10.48□□□□□ -0.73
CLK4-211ENST00000522556 S100A2P29034 98 aa10.48□□□□□ -0.73
CLK4-211ENST00000522556 SMCR5Q8TEV8 140 aa10.48□□□□□ -0.73
CLK4-211ENST00000522556 ETDCA0A1B0GVM5 59 aa10.47□□□□□ -0.73
CLK4-211ENST00000522556 B5MCH6 92 aa10.47□□□□□ -0.73
CLK4-211ENST00000522556 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
CLK4-211ENST00000522556 TYMSOSQ8TAI1 123 aa10.47□□□□□ -0.73
CLK4-211ENST00000522556 ERC2-IT1O76042 136 aa10.46□□□□□ -0.73
CLK4-211ENST00000522556 C3orf22Q8N5N4 141 aa10.46□□□□□ -0.73
CLK4-211ENST00000522556 SPRR4Q96PI1 79 aa10.46□□□□□ -0.73
CLK4-211ENST00000522556 S100A6P06703 90 aa10.45□□□□□ -0.74
CLK4-211ENST00000522556 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
CLK4-211ENST00000522556 S100A7L2Q5SY68 101 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms