RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
CPNE3-205ENST00000522240 C9orf163Q8N9P6 203 aa8.45□□□□□ -1.06
CPNE3-205ENST00000522240 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
CPNE3-205ENST00000522240 CTAG1AP78358 180 aa8.44□□□□□ -1.06
CPNE3-205ENST00000522240 DAND5Q8N907 189 aa8.44□□□□□ -1.06
CPNE3-205ENST00000522240 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
CPNE3-205ENST00000522240 PCP4L1A6NKN8 68 aa8.43□□□□□ -1.06
CPNE3-205ENST00000522240 M0R143 59 aa8.43□□□□□ -1.06
CPNE3-205ENST00000522240 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
CPNE3-205ENST00000522240 CEND1Q8N111 149 aa8.43□□□□□ -1.06
CPNE3-205ENST00000522240 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
CPNE3-205ENST00000522240 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
CPNE3-205ENST00000522240 RPL18AQ02543 176 aaKnown RBP8.42□□□□□ -1.06
CPNE3-205ENST00000522240 Q6ZRP5 223 aa8.42□□□□□ -1.06
CPNE3-205ENST00000522240 SND1-IT1Q9HBX3 110 aa8.42□□□□□ -1.06
CPNE3-205ENST00000522240 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
CPNE3-205ENST00000522240 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
CPNE3-205ENST00000522240 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
CPNE3-205ENST00000522240 MUSTN1Q8IVN3 82 aa8.41□□□□□ -1.06
CPNE3-205ENST00000522240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-205ENST00000522240 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
CPNE3-205ENST00000522240 BVES-AS1Q5T3Y7 98 aa8.4□□□□□ -1.06
CPNE3-205ENST00000522240 FAT2Q9NYQ8 4349 aa8.4□□□□□ -1.06
CPNE3-205ENST00000522240 C16orf90A8MZG2 172 aa8.39□□□□□ -1.07
CPNE3-205ENST00000522240 FXYD2P54710 66 aa8.39□□□□□ -1.07
CPNE3-205ENST00000522240 NPC2P61916 151 aa8.39□□□□□ -1.07
CPNE3-205ENST00000522240 RYR1P21817 5038 aa8.38□□□□□ -1.07
CPNE3-205ENST00000522240 NDUFC2O95298 119 aa8.38□□□□□ -1.07
CPNE3-205ENST00000522240 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-205ENST00000522240 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
CPNE3-205ENST00000522240 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
CPNE3-205ENST00000522240 A0A096LNI7 61 aa8.37□□□□□ -1.07
CPNE3-205ENST00000522240 A4D1N5 150 aa8.37□□□□□ -1.07
CPNE3-205ENST00000522240 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
CPNE3-205ENST00000522240 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
CPNE3-205ENST00000522240 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
CPNE3-205ENST00000522240 KRTAP10-2P60368 255 aa8.36□□□□□ -1.07
CPNE3-205ENST00000522240 C9orf129Q5T035 196 aaKnown RBP8.36□□□□□ -1.07
CPNE3-205ENST00000522240 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
CPNE3-205ENST00000522240 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
CPNE3-205ENST00000522240 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
CPNE3-205ENST00000522240 A0A1B0GVY2 172 aa8.34□□□□□ -1.07
CPNE3-205ENST00000522240 A0A1B0GWB2 263 aa8.34□□□□□ -1.07
CPNE3-205ENST00000522240 A6NDN8 102 aa8.34□□□□□ -1.07
CPNE3-205ENST00000522240 VPREB1P12018 145 aa8.34□□□□□ -1.07
CPNE3-205ENST00000522240 DNAH11Q96DT5 4516 aa8.34□□□□□ -1.07
CPNE3-205ENST00000522240 IGLV5-37A0A075B6J1 123 aa8.33□□□□□ -1.08
CPNE3-205ENST00000522240 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
CPNE3-205ENST00000522240 LINC01620Q4KN68 170 aa8.33□□□□□ -1.08
CPNE3-205ENST00000522240 SNHG12Q9BXW3 62 aa8.33□□□□□ -1.08
CPNE3-205ENST00000522240 NHP2Q9NX24 153 aaKnown RBP8.33□□□□□ -1.08
CPNE3-205ENST00000522240 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
CPNE3-205ENST00000522240 CFC1BP0CG36 223 aa8.32□□□□□ -1.08
CPNE3-205ENST00000522240 CFC1P0CG37 223 aa8.32□□□□□ -1.08
CPNE3-205ENST00000522240 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPNE3-205ENST00000522240 BATFQ16520 125 aa8.32□□□□□ -1.08
CPNE3-205ENST00000522240 Q8NDZ9 215 aa8.32□□□□□ -1.08
CPNE3-205ENST00000522240 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
CPNE3-205ENST00000522240 PKD1P98161 4303 aa8.31□□□□□ -1.08
CPNE3-205ENST00000522240 IGKV2-28A0A075B6P5 120 aa8.31□□□□□ -1.08
CPNE3-205ENST00000522240 C9orf118A6NHY6 69 aa8.31□□□□□ -1.08
CPNE3-205ENST00000522240 IGKV2D-28P01615 120 aa8.31□□□□□ -1.08
CPNE3-205ENST00000522240 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
CPNE3-205ENST00000522240 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
CPNE3-205ENST00000522240 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
CPNE3-205ENST00000522240 SERTAD4-AS1Q5TG53 156 aa8.3□□□□□ -1.08
CPNE3-205ENST00000522240 RAB37Q96AX2 223 aa8.3□□□□□ -1.08
CPNE3-205ENST00000522240 LINC00337Q8N6G1 96 aa8.29□□□□□ -1.08
CPNE3-205ENST00000522240 NKAPP1Q8N9T2 125 aa8.29□□□□□ -1.08
CPNE3-205ENST00000522240 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
CPNE3-205ENST00000522240 K7ERJ3 54 aa8.28□□□□□ -1.08
CPNE3-205ENST00000522240 M0R378 163 aa8.28□□□□□ -1.08
CPNE3-205ENST00000522240 NCR3O14931 201 aa8.28□□□□□ -1.08
CPNE3-205ENST00000522240 FAM19A5Q7Z5A7 132 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-205ENST00000522240 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
CPNE3-205ENST00000522240 PANO1I0J062 215 aa8.27□□□□□ -1.09
CPNE3-205ENST00000522240 COL5A1-AS1Q5SY13 56 aa8.27□□□□□ -1.09
CPNE3-205ENST00000522240 Q6ZSA8 131 aa8.27□□□□□ -1.09
CPNE3-205ENST00000522240 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
CPNE3-205ENST00000522240 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.09
CPNE3-205ENST00000522240 A0A1W2PNN7 141 aa8.26□□□□□ -1.09
CPNE3-205ENST00000522240 M0QXV9 152 aa8.26□□□□□ -1.09
CPNE3-205ENST00000522240 RPL13AP40429 203 aaKnown RBP8.26□□□□□ -1.09
CPNE3-205ENST00000522240 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
CPNE3-205ENST00000522240 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
CPNE3-205ENST00000522240 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
CPNE3-205ENST00000522240 IGLV6-57P01721 117 aa8.25□□□□□ -1.09
CPNE3-205ENST00000522240 KRTAP10-1P60331 282 aa8.25□□□□□ -1.09
CPNE3-205ENST00000522240 LBHQ53QV2 105 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-205ENST00000522240 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
CPNE3-205ENST00000522240 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
CPNE3-205ENST00000522240 PLAC8Q9NZF1 115 aa8.25□□□□□ -1.09
CPNE3-205ENST00000522240 CBY1Q9Y3M2 126 aa8.25□□□□□ -1.09
CPNE3-205ENST00000522240 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
CPNE3-205ENST00000522240 A0A087WYN8 130 aa8.24□□□□□ -1.09
CPNE3-205ENST00000522240 OR13C6PQ8NH95 151 aa8.24□□□□□ -1.09
CPNE3-205ENST00000522240 C7orf33Q8WU49 177 aa8.24□□□□□ -1.09
CPNE3-205ENST00000522240 TRBV10-3A0A0K0K1G6 114 aa8.23□□□□□ -1.09
CPNE3-205ENST00000522240 TAX1BP3O14907 124 aa8.22□□□□□ -1.09
CPNE3-205ENST00000522240 TSPAN13O95857 204 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms