RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 HIGD1CA8MV81 97 aa1.38□□□□□ -2.19
CTNNA1-233ENST00000522052 J3QLW9 94 aa1.38□□□□□ -2.19
CTNNA1-233ENST00000522052 NPFFO15130 113 aa1.38□□□□□ -2.19
CTNNA1-233ENST00000522052 RPS25P62851 125 aaKnown RBP1.38□□□□□ -2.19
CTNNA1-233ENST00000522052 SARNPP82979 210 aaKnown RBP1.38□□□□□ -2.19
CTNNA1-233ENST00000522052 DYNLRB2Q8TF09 96 aa1.38□□□□□ -2.19
CTNNA1-233ENST00000522052 DNAH8Q96JB1 4490 aa1.37□□□□□ -2.19
CTNNA1-233ENST00000522052 UQCRHLA0A096LP55 91 aa1.37□□□□□ -2.19
CTNNA1-233ENST00000522052 A0A1W2PPM0 123 aa1.37□□□□□ -2.19
CTNNA1-233ENST00000522052 SPINT3P49223 89 aa1.37□□□□□ -2.19
CTNNA1-233ENST00000522052 ZNF720Q7Z2F6 126 aa1.37□□□□□ -2.19
CTNNA1-233ENST00000522052 ATOH7Q8N100 152 aa1.37□□□□□ -2.19
CTNNA1-233ENST00000522052 TRBV10-1A0A0K0K1A3 114 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 H0YGG7 62 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 M0R129 80 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 NDUFA2O43678 99 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 Q86TA4 180 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 VPS25Q9BRG1 176 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 DYNLRB1Q9NP97 96 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 ERG28Q9UKR5 140 aa1.36□□□□□ -2.19
CTNNA1-233ENST00000522052 NBDYA0A0U1RRE5 68 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 LOC101927531A0A1B0GV80 90 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 ZNF670-ZNF695F2Z2N8 137 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 CAV3P56539 151 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 COPZ1P61923 177 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 BTG2P78543 158 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 FXYD3Q14802 87 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 DEFB106AQ8N104 65 aa1.35□□□□□ -2.19
CTNNA1-233ENST00000522052 CCKP06307 115 aa1.34□□□□□ -2.19
CTNNA1-233ENST00000522052 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
CTNNA1-233ENST00000522052 TSC22D3Q99576 134 aa1.34□□□□□ -2.19
CTNNA1-233ENST00000522052 SPCS2Q15005 226 aa1.33□□□□□ -2.2
CTNNA1-233ENST00000522052 C10orf99Q6UWK7 81 aa1.33□□□□□ -2.2
CTNNA1-233ENST00000522052 LINC00208Q96KT6 92 aa1.33□□□□□ -2.2
CTNNA1-233ENST00000522052 H3BSH0 61 aa1.32□□□□□ -2.2
CTNNA1-233ENST00000522052 H3BUX3 64 aa1.32□□□□□ -2.2
CTNNA1-233ENST00000522052 SNRNP200O75643 2136 aaKnown RBP1.32□□□□□ -2.2
CTNNA1-233ENST00000522052 SLC25A6P12236 298 aa1.32□□□□□ -2.2
CTNNA1-233ENST00000522052 MIC13Q5XKP0 118 aa1.32□□□□□ -2.2
CTNNA1-233ENST00000522052 C5orf56Q8N8D9 126 aa1.32□□□□□ -2.2
CTNNA1-233ENST00000522052 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
CTNNA1-233ENST00000522052 PITX3O75364 302 aa1.31□□□□□ -2.2
CTNNA1-233ENST00000522052 CCL8P80075 99 aa1.31□□□□□ -2.2
CTNNA1-233ENST00000522052 Q6ZUT4 128 aa1.31□□□□□ -2.2
CTNNA1-233ENST00000522052 VSTM2AQ8TAG5 236 aa1.31□□□□□ -2.2
CTNNA1-233ENST00000522052 DSTQ03001 7570 aaKnown RBP1.3□□□□□ -2.2
CTNNA1-233ENST00000522052 CCDC179H3BU77 68 aa1.3□□□□□ -2.2
CTNNA1-233ENST00000522052 TFF1P04155 84 aa1.3□□□□□ -2.2
CTNNA1-233ENST00000522052 PYYP10082 97 aa1.3□□□□□ -2.2
CTNNA1-233ENST00000522052 LINC01545Q5VT33 79 aa1.3□□□□□ -2.2
CTNNA1-233ENST00000522052 SDF2Q99470 211 aa1.3□□□□□ -2.2
CTNNA1-233ENST00000522052 TMEM191AQ9H0A3 160 aa1.3□□□□□ -2.2
CTNNA1-233ENST00000522052 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
CTNNA1-233ENST00000522052 MUC17Q685J3 4493 aa1.29□□□□□ -2.2
CTNNA1-233ENST00000522052 APOC1P02654 83 aa1.29□□□□□ -2.2
CTNNA1-233ENST00000522052 RRAS2P62070 204 aaPredicted RBP1.29□□□□□ -2.2
CTNNA1-233ENST00000522052 PSMG3Q9BT73 122 aaPredicted RBP1.29□□□□□ -2.2
CTNNA1-233ENST00000522052 TEX49A0A1B0GTD5 131 aa1.28□□□□□ -2.2
CTNNA1-233ENST00000522052 PIRTP0C851 137 aa1.28□□□□□ -2.2
CTNNA1-233ENST00000522052 GUCA1AP43080 201 aaPredicted RBP1.28□□□□□ -2.2
CTNNA1-233ENST00000522052 MT1HP80294 61 aa1.28□□□□□ -2.2
CTNNA1-233ENST00000522052 DEFB136Q30KP8 78 aa1.28□□□□□ -2.2
CTNNA1-233ENST00000522052 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
CTNNA1-233ENST00000522052 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.21
CTNNA1-233ENST00000522052 K7EP13 123 aa1.27□□□□□ -2.21
CTNNA1-233ENST00000522052 SELENOWP63302 87 aa1.27□□□□□ -2.21
CTNNA1-233ENST00000522052 ZNF56Q15929 161 aa1.27□□□□□ -2.21
CTNNA1-233ENST00000522052 NDUFA12Q9UI09 145 aa1.27□□□□□ -2.21
CTNNA1-233ENST00000522052 FXYD1O00168 92 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 IFNA17P01571 189 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 PRB3Q04118 309 aaPredicted RBP1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 KRTAP19-6Q3LI70 58 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 SPANXN1Q5VSR9 72 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 OR2T2Q6IF00 324 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 C10orf82Q8WW14 230 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 ARL11Q969Q4 196 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 LINC00846Q9NV44 126 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 CCDC167Q9P0B6 97 aa1.26□□□□□ -2.21
CTNNA1-233ENST00000522052 SNRPFP62306 86 aaKnown RBP1.25□□□□□ -2.21
CTNNA1-233ENST00000522052 KLKP1Q107X0 134 aa1.25□□□□□ -2.21
CTNNA1-233ENST00000522052 VMO1Q7Z5L0 202 aa1.25□□□□□ -2.21
CTNNA1-233ENST00000522052 UBE2DNLQ8IWF7 75 aa1.25□□□□□ -2.21
CTNNA1-233ENST00000522052 KCNRGQ8N5I3 272 aa1.25□□□□□ -2.21
CTNNA1-233ENST00000522052 IFI27L1Q96BM0 104 aa1.25□□□□□ -2.21
CTNNA1-233ENST00000522052 LINC00470Q9BZP3 86 aa1.25□□□□□ -2.21
CTNNA1-233ENST00000522052 LINC01600Q96MT4 127 aa1.24□□□□□ -2.21
CTNNA1-233ENST00000522052 TCRBV3S1A0A5B6 114 aa1.23□□□□□ -2.21
CTNNA1-233ENST00000522052 EMX2Q04743 252 aa1.23□□□□□ -2.21
CTNNA1-233ENST00000522052 SPINK13Q1W4C9 94 aa1.23□□□□□ -2.21
CTNNA1-233ENST00000522052 SPINK9Q5DT21 86 aa1.23□□□□□ -2.21
CTNNA1-233ENST00000522052 TSKUQ8WUA8 353 aa1.23□□□□□ -2.21
CTNNA1-233ENST00000522052 TRAV12-2A0A075B6T6 113 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 EFCAB10A6NFE3 127 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 GNG7O60262 68 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 IL5P05113 134 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 FXYD6P3P58550 94 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 KRTAP19-2Q3LHN2 52 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 SLC48A1Q6P1K1 146 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 C1orf54Q8WWF1 131 aa1.22□□□□□ -2.21
CTNNA1-233ENST00000522052 DPH3Q96FX2 82 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms