RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 Q8N814 137 aa1.98□□□□□ -2.09
VPS13B-209ENST00000521559 PACRGQ96M98 296 aaPredicted RBP1.98□□□□□ -2.09
VPS13B-209ENST00000521559 GEMIN7Q9H840 131 aaKnown RBP1.98□□□□□ -2.09
VPS13B-209ENST00000521559 DNAH9Q9NYC9 4486 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 IGHV3-64A0A075B6Q5 118 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 GVQW2A0A096LPI5 108 aaPredicted RBP1.97□□□□□ -2.09
VPS13B-209ENST00000521559 IGLC3P0DOY3 106 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 FABP4P15090 132 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 SPATA12Q7Z6I5 190 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 C15orf56Q8N910 161 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 MAP1LC3CQ9BXW4 147 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 CDKN2A-AS1Q9UH64 79 aa1.97□□□□□ -2.09
VPS13B-209ENST00000521559 CHTOPQ9Y3Y2 248 aaKnown RBP1.97□□□□□ -2.09
VPS13B-209ENST00000521559 IGLV4-69A0A075B6H9 119 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.96□□□□□ -2.1
VPS13B-209ENST00000521559 C11orf86A6NJI1 115 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 C16orf90A8MZG2 172 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 F8VRH5 84 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 H3BRM9 83 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 SYS1-DBNDD2H3BUS1 97 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 PANO1I0J062 215 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 S100A6P06703 90 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 CHTF8P0CG12 524 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 S100A2P29034 98 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 FUSP35637 526 aaKnown RBP eCLIP1.96□□□□□ -2.1
VPS13B-209ENST00000521559 CNBPP62633 177 aaKnown RBP1.96□□□□□ -2.1
VPS13B-209ENST00000521559 SPAG11BQ08648 103 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 KIAA0087Q14695 138 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 HIST3H2BBQ8N257 126 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 LINC00469Q8N7U9 141 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 OR10D4PQ8NGN7 298 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 ORAOV1Q8WV07 137 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 CHAC1Q9BUX1 264 aa1.96□□□□□ -2.1
VPS13B-209ENST00000521559 MRPL35Q9NZE8 188 aaKnown RBP1.96□□□□□ -2.1
VPS13B-209ENST00000521559 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.95□□□□□ -2.1
VPS13B-209ENST00000521559 TMEM223A0PJW6 202 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 DPM2O94777 84 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 SPINK8P0C7L1 97 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 C3orf79P0CE67 100 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 ZNF22P17026 224 aaPredicted RBP1.95□□□□□ -2.1
VPS13B-209ENST00000521559 PLNP26678 52 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 KRTDAPP60985 99 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 HERVK_113P61574 105 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 SYCNQ0VAF6 134 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 TMEM170BQ5T4T1 132 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 LINC01545Q5VT33 79 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 SDIM1Q6ZPB5 146 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 Q6ZRU5 148 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 Q8IZM0 81 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 C9orf163Q8N9P6 203 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 LINC00526Q96FQ7 95 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 CARD19Q96LW7 228 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 CAMK2N2Q96S95 79 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 HIST1H2BLQ99880 126 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 TOMM7Q9P0U1 55 aa1.95□□□□□ -2.1
VPS13B-209ENST00000521559 TRBV30A0A0K0K1B3 111 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 C20orf202A1L168 122 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 KRTAP4-16G5E9R7 235 aaPredicted RBP1.94□□□□□ -2.1
VPS13B-209ENST00000521559 NDUFA1O15239 70 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 LEPROTO15243 131 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 IGKCP01834 107 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 CXCL5P42830 114 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 AKR1D1P51857 326 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 CKS1BP61024 79 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 C2orf82Q6UX34 121 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 UNQ6190/PRO20217Q6UXQ8 127 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 PLEKHB2Q96CS7 222 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 PMCHL2Q9BQD1 86 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 C6orf48Q9UBA6 75 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 PKIGQ9Y2B9 76 aa1.94□□□□□ -2.1
VPS13B-209ENST00000521559 LOC107984640A0A0U1RRK4 108 aa1.93□□□□□ -2.1
VPS13B-209ENST00000521559 TLX1NBP0CAT3 122 aa1.93□□□□□ -2.1
VPS13B-209ENST00000521559 SFTA2Q6UW10 78 aa1.93□□□□□ -2.1
VPS13B-209ENST00000521559 Q6ZSA8 131 aa1.93□□□□□ -2.1
VPS13B-209ENST00000521559 DPH3Q96FX2 82 aa1.93□□□□□ -2.1
VPS13B-209ENST00000521559 ZNF625Q96I27 306 aaPredicted RBP1.93□□□□□ -2.1
VPS13B-209ENST00000521559 LINC00474Q9P2X8 69 aa1.93□□□□□ -2.1
VPS13B-209ENST00000521559 A0A096LNI7 61 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 MYMXA0A1B0GTQ4 84 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 LINC00587B1AMM8 73 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 NDUFC2-KCTD14E9PQ53 114 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 J3QQQ9 107 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 LGALS3P17931 250 aaKnown RBP1.92□□□□□ -2.1
VPS13B-209ENST00000521559 NMUP48645 174 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 CIRBPQ14011 172 aaKnown RBP1.92□□□□□ -2.1
VPS13B-209ENST00000521559 COX17Q14061 63 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 JOSD1Q15040 202 aaPredicted RBP1.92□□□□□ -2.1
VPS13B-209ENST00000521559 C9orf116Q5BN46 136 aaPredicted RBP1.92□□□□□ -2.1
VPS13B-209ENST00000521559 CAMK2N1Q7Z7J9 78 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 ATOH7Q8N100 152 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 CIRBP-AS1Q8TBR5 109 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 SPACA4Q8TDM5 124 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 PLAC8Q9NZF1 115 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 NDUFA12Q9UI09 145 aa1.92□□□□□ -2.1
VPS13B-209ENST00000521559 IGKV2D-26A0A0A0MRZ7 120 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 IGKV2-24A0A0C4DH68 120 aa1.91□□□□□ -2.1
VPS13B-209ENST00000521559 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms