RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 RPL23P62829 140 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-212ENST00000520860 MRPL54Q6P161 138 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-212ENST00000520860 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
SRGAP3-212ENST00000520860 SMIM27A0A1W2PRY6 76 aa7.15□□□□□ -1.26
SRGAP3-212ENST00000520860 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
SRGAP3-212ENST00000520860 RPS10P5Q9NQ39 176 aa7.15□□□□□ -1.26
SRGAP3-212ENST00000520860 IGIPA6NJ69 53 aa7.14□□□□□ -1.27
SRGAP3-212ENST00000520860 ATP5LO75964 103 aa7.14□□□□□ -1.27
SRGAP3-212ENST00000520860 S100PP25815 95 aa7.14□□□□□ -1.27
SRGAP3-212ENST00000520860 PFN2P35080 140 aa7.14□□□□□ -1.27
SRGAP3-212ENST00000520860 MOBPQ13875 183 aa7.13□□□□□ -1.27
SRGAP3-212ENST00000520860 MAP1LC3AQ9H492 121 aa7.13□□□□□ -1.27
SRGAP3-212ENST00000520860 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
SRGAP3-212ENST00000520860 SND1-IT1Q9HBX3 110 aa7.12□□□□□ -1.27
SRGAP3-212ENST00000520860 SMCO4Q9NRQ5 59 aa7.12□□□□□ -1.27
SRGAP3-212ENST00000520860 SSPOA2VEC9 5147 aa7.12□□□□□ -1.27
SRGAP3-212ENST00000520860 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
SRGAP3-212ENST00000520860 A0A1B0GXF2 115 aa7.11□□□□□ -1.27
SRGAP3-212ENST00000520860 PRSS47A8MTI9 375 aa7.11□□□□□ -1.27
SRGAP3-212ENST00000520860 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
SRGAP3-212ENST00000520860 Q8N8P6 123 aa7.11□□□□□ -1.27
SRGAP3-212ENST00000520860 LAMTOR2Q9Y2Q5 125 aa7.11□□□□□ -1.27
SRGAP3-212ENST00000520860 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
SRGAP3-212ENST00000520860 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
SRGAP3-212ENST00000520860 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
SRGAP3-212ENST00000520860 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
SRGAP3-212ENST00000520860 GAGE2AQ6NT46 116 aa7.09□□□□□ -1.27
SRGAP3-212ENST00000520860 USH2AO75445 5202 aa7.09□□□□□ -1.28
SRGAP3-212ENST00000520860 TINCRA0A1B0GVN0 87 aa7.08□□□□□ -1.28
SRGAP3-212ENST00000520860 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
SRGAP3-212ENST00000520860 IGLV5-45A0A087WSX0 123 aa7.07□□□□□ -1.28
SRGAP3-212ENST00000520860 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
SRGAP3-212ENST00000520860 K7EMI3 77 aa7.07□□□□□ -1.28
SRGAP3-212ENST00000520860 G0S2P27469 103 aa7.07□□□□□ -1.28
SRGAP3-212ENST00000520860 COX19Q49B96 90 aa7.07□□□□□ -1.28
SRGAP3-212ENST00000520860 Q8NDZ9 215 aa7.07□□□□□ -1.28
SRGAP3-212ENST00000520860 ERG28Q9UKR5 140 aa7.07□□□□□ -1.28
SRGAP3-212ENST00000520860 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-212ENST00000520860 CFC1P0CG37 223 aa7.05□□□□□ -1.28
SRGAP3-212ENST00000520860 COX17Q14061 63 aa7.05□□□□□ -1.28
SRGAP3-212ENST00000520860 ATP5L2Q7Z4Y8 100 aa7.05□□□□□ -1.28
SRGAP3-212ENST00000520860 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
SRGAP3-212ENST00000520860 PRYO14603 147 aa7.04□□□□□ -1.28
SRGAP3-212ENST00000520860 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-212ENST00000520860 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
SRGAP3-212ENST00000520860 H3BRM9 83 aa7.03□□□□□ -1.28
SRGAP3-212ENST00000520860 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
SRGAP3-212ENST00000520860 NXT2Q9NPJ8 142 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-212ENST00000520860 KRTAP4-16G5E9R7 235 aaPredicted RBP7.02□□□□□ -1.29
SRGAP3-212ENST00000520860 ERASQ7Z444 233 aa7.02□□□□□ -1.29
SRGAP3-212ENST00000520860 SCGB3A1Q96QR1 104 aa7.02□□□□□ -1.29
SRGAP3-212ENST00000520860 SPRR1AP35321 89 aa7.01□□□□□ -1.29
SRGAP3-212ENST00000520860 C9orf153Q5TBE3 101 aa7.01□□□□□ -1.29
SRGAP3-212ENST00000520860 ZNF625Q96I27 306 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-212ENST00000520860 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-212ENST00000520860 CST9LQ9H4G1 147 aa6.99□□□□□ -1.29
SRGAP3-212ENST00000520860 IGLV5-39A0A0G2JS06 123 aa6.98□□□□□ -1.29
SRGAP3-212ENST00000520860 COLCA2A8K830 154 aa6.98□□□□□ -1.29
SRGAP3-212ENST00000520860 IGLV6-57P01721 117 aa6.98□□□□□ -1.29
SRGAP3-212ENST00000520860 YPEL4Q96NS1 127 aa6.98□□□□□ -1.29
SRGAP3-212ENST00000520860 LIMD2Q9BT23 127 aa6.98□□□□□ -1.29
SRGAP3-212ENST00000520860 KCNQ1DNQ9H478 68 aa6.98□□□□□ -1.29
SRGAP3-212ENST00000520860 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-212ENST00000520860 ERC2-IT1O76042 136 aa6.96□□□□□ -1.3
SRGAP3-212ENST00000520860 LINC00158P58513 81 aa6.96□□□□□ -1.3
SRGAP3-212ENST00000520860 PMVKQ15126 192 aa6.96□□□□□ -1.3
SRGAP3-212ENST00000520860 SFTA2Q6UW10 78 aa6.96□□□□□ -1.3
SRGAP3-212ENST00000520860 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
SRGAP3-212ENST00000520860 TRAPPC1Q9Y5R8 145 aa6.96□□□□□ -1.3
SRGAP3-212ENST00000520860 LINC01549A6NIU2 74 aa6.95□□□□□ -1.3
SRGAP3-212ENST00000520860 S100A12P80511 92 aa6.95□□□□□ -1.3
SRGAP3-212ENST00000520860 NCR3O14931 201 aa6.94□□□□□ -1.3
SRGAP3-212ENST00000520860 RPL37P61927 97 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-212ENST00000520860 Q6Q795 121 aa6.94□□□□□ -1.3
SRGAP3-212ENST00000520860 B5MCH6 92 aa6.93□□□□□ -1.3
SRGAP3-212ENST00000520860 FABP9Q0Z7S8 132 aa6.93□□□□□ -1.3
SRGAP3-212ENST00000520860 BOD1L2Q8IYS8 172 aa6.93□□□□□ -1.3
SRGAP3-212ENST00000520860 TRBV10-3A0A0K0K1G6 114 aa6.92□□□□□ -1.3
SRGAP3-212ENST00000520860 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
SRGAP3-212ENST00000520860 HRCT1Q6UXD1 115 aa6.92□□□□□ -1.3
SRGAP3-212ENST00000520860 TRGC2P03986 189 aa6.91□□□□□ -1.3
SRGAP3-212ENST00000520860 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
SRGAP3-212ENST00000520860 ZNF22P17026 224 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-212ENST00000520860 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
SRGAP3-212ENST00000520860 S100A6P06703 90 aa6.9□□□□□ -1.3
SRGAP3-212ENST00000520860 Q9BRP9 147 aa6.9□□□□□ -1.3
SRGAP3-212ENST00000520860 Q6ZRX8 168 aa6.89□□□□□ -1.31
SRGAP3-212ENST00000520860 NDUFA6P56556 154 aa6.87□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 KIAA1644Q3SXP7 199 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
SRGAP3-212ENST00000520860 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
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